data_7T6C # _model_server_result.job_id oEzIpkZFR6j2NnhOFokXfA _model_server_result.datetime_utc '2024-12-26 03:27:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t6c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 7T6C # _exptl.entry_id 7T6C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T6C _cell.length_a 104.046 _cell.length_b 169.328 _cell.length_c 129.97 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T6C _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 J N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 7T6C _atom_sites.fract_transf_matrix[1][1] 0.009611 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005906 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007694 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PE4 A 1 501 501 PE4 PE4 . D 3 ORO A 1 502 502 ORO ORO . E 4 RLM A 1 503 503 RLM DCI . F 5 FMN A 1 504 1 FMN FMN . G 6 GOL B 1 501 501 GOL GOL . H 3 ORO B 1 502 502 ORO ORO . I 4 RLM B 1 503 503 RLM DCI . J 5 FMN B 1 504 1 FMN FMN . K 7 HOH A 1 601 82 HOH HOH . K 7 HOH A 2 602 5 HOH HOH . K 7 HOH A 3 603 52 HOH HOH . K 7 HOH A 4 604 23 HOH HOH . K 7 HOH A 5 605 6 HOH HOH . K 7 HOH A 6 606 7 HOH HOH . K 7 HOH A 7 607 59 HOH HOH . K 7 HOH A 8 608 14 HOH HOH . K 7 HOH A 9 609 88 HOH HOH . K 7 HOH A 10 610 55 HOH HOH . K 7 HOH A 11 611 27 HOH HOH . K 7 HOH A 12 612 81 HOH HOH . K 7 HOH A 13 613 17 HOH HOH . K 7 HOH A 14 614 38 HOH HOH . K 7 HOH A 15 615 21 HOH HOH . K 7 HOH A 16 616 112 HOH HOH . K 7 HOH A 17 617 96 HOH HOH . K 7 HOH A 18 618 41 HOH HOH . K 7 HOH A 19 619 42 HOH HOH . K 7 HOH A 20 620 107 HOH HOH . K 7 HOH A 21 621 36 HOH HOH . K 7 HOH A 22 622 26 HOH HOH . K 7 HOH A 23 623 11 HOH HOH . K 7 HOH A 24 624 12 HOH HOH . K 7 HOH A 25 625 34 HOH HOH . K 7 HOH A 26 626 108 HOH HOH . K 7 HOH A 27 627 30 HOH HOH . K 7 HOH A 28 628 16 HOH HOH . K 7 HOH A 29 629 106 HOH HOH . K 7 HOH A 30 630 43 HOH HOH . K 7 HOH A 31 631 69 HOH HOH . K 7 HOH A 32 632 13 HOH HOH . K 7 HOH A 33 633 102 HOH HOH . K 7 HOH A 34 634 33 HOH HOH . K 7 HOH A 35 635 29 HOH HOH . K 7 HOH A 36 636 97 HOH HOH . K 7 HOH A 37 637 15 HOH HOH . K 7 HOH A 38 638 32 HOH HOH . K 7 HOH A 39 639 64 HOH HOH . K 7 HOH A 40 640 90 HOH HOH . K 7 HOH A 41 641 24 HOH HOH . K 7 HOH A 42 642 95 HOH HOH . K 7 HOH A 43 643 103 HOH HOH . K 7 HOH A 44 644 44 HOH HOH . K 7 HOH A 45 645 67 HOH HOH . K 7 HOH A 46 646 19 HOH HOH . K 7 HOH A 47 647 94 HOH HOH . K 7 HOH A 48 648 20 HOH HOH . K 7 HOH A 49 649 35 HOH HOH . K 7 HOH A 50 650 76 HOH HOH . K 7 HOH A 51 651 73 HOH HOH . K 7 HOH A 52 652 49 HOH HOH . K 7 HOH A 53 653 118 HOH HOH . K 7 HOH A 54 654 71 HOH HOH . K 7 HOH A 55 655 45 HOH HOH . K 7 HOH A 56 656 78 HOH HOH . K 7 HOH A 57 657 121 HOH HOH . K 7 HOH A 58 658 91 HOH HOH . K 7 HOH A 59 659 119 HOH HOH . K 7 HOH A 60 660 109 HOH HOH . K 7 HOH A 61 661 100 HOH HOH . K 7 HOH A 62 662 104 HOH HOH . K 7 HOH A 63 663 120 HOH HOH . L 7 HOH B 1 601 60 HOH HOH . L 7 HOH B 2 602 22 HOH HOH . L 7 HOH B 3 603 2 HOH HOH . L 7 HOH B 4 604 31 HOH HOH . L 7 HOH B 5 605 80 HOH HOH . L 7 HOH B 6 606 10 HOH HOH . L 7 HOH B 7 607 101 HOH HOH . L 7 HOH B 8 608 1 HOH HOH . L 7 HOH B 9 609 9 HOH HOH . L 7 HOH B 10 610 75 HOH HOH . L 7 HOH B 11 611 63 HOH HOH . L 7 HOH B 12 612 39 HOH HOH . L 7 HOH B 13 613 3 HOH HOH . L 7 HOH B 14 614 62 HOH HOH . L 7 HOH B 15 615 53 HOH HOH . L 7 HOH B 16 616 117 HOH HOH . L 7 HOH B 17 617 25 HOH HOH . L 7 HOH B 18 618 28 HOH HOH . L 7 HOH B 19 619 68 HOH HOH . L 7 HOH B 20 620 92 HOH HOH . L 7 HOH B 21 621 57 HOH HOH . L 7 HOH B 22 622 83 HOH HOH . L 7 HOH B 23 623 56 HOH HOH . L 7 HOH B 24 624 8 HOH HOH . L 7 HOH B 25 625 46 HOH HOH . L 7 HOH B 26 626 54 HOH HOH . L 7 HOH B 27 627 37 HOH HOH . L 7 HOH B 28 628 61 HOH HOH . L 7 HOH B 29 629 65 HOH HOH . L 7 HOH B 30 630 48 HOH HOH . L 7 HOH B 31 631 99 HOH HOH . L 7 HOH B 32 632 116 HOH HOH . L 7 HOH B 33 633 98 HOH HOH . L 7 HOH B 34 634 40 HOH HOH . L 7 HOH B 35 635 79 HOH HOH . L 7 HOH B 36 636 86 HOH HOH . L 7 HOH B 37 637 114 HOH HOH . L 7 HOH B 38 638 58 HOH HOH . L 7 HOH B 39 639 77 HOH HOH . L 7 HOH B 40 640 89 HOH HOH . L 7 HOH B 41 641 85 HOH HOH . L 7 HOH B 42 642 47 HOH HOH . L 7 HOH B 43 643 93 HOH HOH . L 7 HOH B 44 644 115 HOH HOH . L 7 HOH B 45 645 74 HOH HOH . L 7 HOH B 46 646 51 HOH HOH . L 7 HOH B 47 647 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . F 5 13.428 25.217 1.352 1 49.42 ? N1 FMN 504 A 1 HETATM 2 C C2 FMN . . . F 5 14.476 24.842 0.536 1 50.62 ? C2 FMN 504 A 1 HETATM 3 O O2 FMN . . . F 5 14.253 24.313 -0.552 1 46.68 ? O2 FMN 504 A 1 HETATM 4 N N3 FMN . . . F 5 15.779 25.063 0.928 1 49.6 ? N3 FMN 504 A 1 HETATM 5 C C4 FMN . . . F 5 16.042 25.656 2.142 1 53.36 ? C4 FMN 504 A 1 HETATM 6 O O4 FMN . . . F 5 17.201 25.855 2.502 1 52.16 ? O4 FMN 504 A 1 HETATM 7 C C4A FMN . . . F 5 14.99 26.031 2.964 1 58.62 ? C4A FMN 504 A 1 HETATM 8 N N5 FMN . . . F 5 15.265 26.623 4.17 1 56.12 ? N5 FMN 504 A 1 HETATM 9 C C5A FMN . . . F 5 14.236 26.998 4.996 1 54.08 ? C5A FMN 504 A 1 HETATM 10 C C6 FMN . . . F 5 14.556 27.589 6.205 1 50.88 ? C6 FMN 504 A 1 HETATM 11 C C7 FMN . . . F 5 13.555 27.981 7.071 1 46.34 ? C7 FMN 504 A 1 HETATM 12 C C7M FMN . . . F 5 13.952 28.625 8.366 1 46.6 ? C7M FMN 504 A 1 HETATM 13 C C8 FMN . . . F 5 12.222 27.798 6.717 1 53.34 ? C8 FMN 504 A 1 HETATM 14 C C8M FMN . . . F 5 11.149 28.225 7.676 1 49.13 ? C8M FMN 504 A 1 HETATM 15 C C9 FMN . . . F 5 11.898 27.188 5.504 1 46.79 ? C9 FMN 504 A 1 HETATM 16 C C9A FMN . . . F 5 12.91 26.79 4.627 1 50.63 ? C9A FMN 504 A 1 HETATM 17 N N10 FMN . . . F 5 12.63 26.189 3.404 1 50.9 ? N10 FMN 504 A 1 HETATM 18 C C10 FMN . . . F 5 13.674 25.814 2.574 1 53.34 ? C10 FMN 504 A 1 HETATM 19 C C1' FMN . . . F 5 11.214 25.952 2.946 1 49.69 ? C1' FMN 504 A 1 HETATM 20 C C2' FMN . . . F 5 10.646 24.674 3.545 1 46.28 ? C2' FMN 504 A 1 HETATM 21 O O2' FMN . . . F 5 11.417 23.572 3.113 1 44.16 ? O2' FMN 504 A 1 HETATM 22 C C3' FMN . . . F 5 9.188 24.431 3.16 1 44.87 ? C3' FMN 504 A 1 HETATM 23 O O3' FMN . . . F 5 9.08 24.086 1.798 1 48.28 ? O3' FMN 504 A 1 HETATM 24 C C4' FMN . . . F 5 8.315 25.65 3.438 1 43.13 ? C4' FMN 504 A 1 HETATM 25 O O4' FMN . . . F 5 8.684 26.241 4.664 1 41.32 ? O4' FMN 504 A 1 HETATM 26 C C5' FMN . . . F 5 6.833 25.297 3.486 1 41.42 ? C5' FMN 504 A 1 HETATM 27 O O5' FMN . . . F 5 6.655 24.14 4.272 1 44.99 ? O5' FMN 504 A 1 HETATM 28 P P FMN . . . F 5 6.114 24.256 5.782 1 41.79 ? P FMN 504 A 1 HETATM 29 O O1P FMN . . . F 5 7.2 24.874 6.631 1 46.28 ? O1P FMN 504 A 1 HETATM 30 O O2P FMN . . . F 5 4.902 25.156 5.802 1 41.33 -1 O2P FMN 504 A 1 HETATM 31 O O3P FMN . . . F 5 5.753 22.894 6.324 1 46.12 ? O3P FMN 504 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 31 #