data_7T79 # _model_server_result.job_id lBENDwpLpmmtgRlqKl_7pg _model_server_result.datetime_utc '2024-11-25 16:52:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t79 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":502}' # _entry.id 7T79 # _exptl.entry_id 7T79 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description alpha-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T79 _cell.length_a 84.51 _cell.length_b 102.08 _cell.length_c 130.98 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T79 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GLC _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLC sing 159 n n C1 O1 GLC sing 160 n n C1 O5 GLC sing 161 n n C1 H1 GLC sing 162 n n C2 C3 GLC sing 163 n n C2 O2 GLC sing 164 n n C2 H2 GLC sing 165 n n C3 C4 GLC sing 166 n n C3 O3 GLC sing 167 n n C3 H3 GLC sing 168 n n C4 C5 GLC sing 169 n n C4 O4 GLC sing 170 n n C4 H4 GLC sing 171 n n C5 C6 GLC sing 172 n n C5 O5 GLC sing 173 n n C5 H5 GLC sing 174 n n C6 O6 GLC sing 175 n n C6 H61 GLC sing 176 n n C6 H62 GLC sing 177 n n O1 HO1 GLC sing 178 n n O2 HO2 GLC sing 179 n n O3 HO3 GLC sing 180 n n O4 HO4 GLC sing 181 n n O6 HO6 GLC sing 182 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GLC a-D-glucopyranose 'COMMON NAME' GMML 1 GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7T79 _atom_sites.fract_transf_matrix[1][1] 0.011833 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009796 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007635 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G1S A 1 501 4000 G1S LIG . D 3 GLC A 1 502 1 GLC GLC . E 2 G1S B 1 501 4000 G1S LIG . F 3 GLC B 1 502 1 GLC GLC . G 4 HOH A 1 601 142 HOH HOH . G 4 HOH A 2 602 141 HOH HOH . G 4 HOH A 3 603 3 HOH HOH . G 4 HOH A 4 604 1 HOH HOH . G 4 HOH A 5 605 25 HOH HOH . G 4 HOH A 6 606 17 HOH HOH . G 4 HOH A 7 607 6 HOH HOH . G 4 HOH A 8 608 42 HOH HOH . G 4 HOH A 9 609 4 HOH HOH . G 4 HOH A 10 610 26 HOH HOH . G 4 HOH A 11 611 137 HOH HOH . G 4 HOH A 12 612 84 HOH HOH . G 4 HOH A 13 613 94 HOH HOH . G 4 HOH A 14 614 9 HOH HOH . G 4 HOH A 15 615 10 HOH HOH . G 4 HOH A 16 616 92 HOH HOH . G 4 HOH A 17 617 29 HOH HOH . G 4 HOH A 18 618 20 HOH HOH . G 4 HOH A 19 619 55 HOH HOH . G 4 HOH A 20 620 5 HOH HOH . G 4 HOH A 21 621 8 HOH HOH . G 4 HOH A 22 622 15 HOH HOH . G 4 HOH A 23 623 35 HOH HOH . G 4 HOH A 24 624 50 HOH HOH . G 4 HOH A 25 625 30 HOH HOH . G 4 HOH A 26 626 85 HOH HOH . G 4 HOH A 27 627 31 HOH HOH . G 4 HOH A 28 628 80 HOH HOH . G 4 HOH A 29 629 23 HOH HOH . G 4 HOH A 30 630 113 HOH HOH . G 4 HOH A 31 631 60 HOH HOH . G 4 HOH A 32 632 70 HOH HOH . G 4 HOH A 33 633 93 HOH HOH . G 4 HOH A 34 634 13 HOH HOH . G 4 HOH A 35 635 44 HOH HOH . G 4 HOH A 36 636 129 HOH HOH . G 4 HOH A 37 637 69 HOH HOH . G 4 HOH A 38 638 2 HOH HOH . G 4 HOH A 39 639 45 HOH HOH . G 4 HOH A 40 640 27 HOH HOH . G 4 HOH A 41 641 14 HOH HOH . G 4 HOH A 42 642 19 HOH HOH . G 4 HOH A 43 643 99 HOH HOH . G 4 HOH A 44 644 21 HOH HOH . G 4 HOH A 45 645 98 HOH HOH . G 4 HOH A 46 646 73 HOH HOH . G 4 HOH A 47 647 75 HOH HOH . G 4 HOH A 48 648 46 HOH HOH . G 4 HOH A 49 649 135 HOH HOH . G 4 HOH A 50 650 136 HOH HOH . G 4 HOH A 51 651 100 HOH HOH . G 4 HOH A 52 652 116 HOH HOH . H 4 HOH B 1 601 132 HOH HOH . H 4 HOH B 2 602 41 HOH HOH . H 4 HOH B 3 603 36 HOH HOH . H 4 HOH B 4 604 91 HOH HOH . H 4 HOH B 5 605 54 HOH HOH . H 4 HOH B 6 606 12 HOH HOH . H 4 HOH B 7 607 122 HOH HOH . H 4 HOH B 8 608 95 HOH HOH . H 4 HOH B 9 609 34 HOH HOH . H 4 HOH B 10 610 83 HOH HOH . H 4 HOH B 11 611 16 HOH HOH . H 4 HOH B 12 612 24 HOH HOH . H 4 HOH B 13 613 22 HOH HOH . H 4 HOH B 14 614 11 HOH HOH . H 4 HOH B 15 615 18 HOH HOH . H 4 HOH B 16 616 47 HOH HOH . H 4 HOH B 17 617 108 HOH HOH . H 4 HOH B 18 618 87 HOH HOH . H 4 HOH B 19 619 65 HOH HOH . H 4 HOH B 20 620 7 HOH HOH . H 4 HOH B 21 621 74 HOH HOH . H 4 HOH B 22 622 81 HOH HOH . H 4 HOH B 23 623 88 HOH HOH . H 4 HOH B 24 624 33 HOH HOH . H 4 HOH B 25 625 49 HOH HOH . H 4 HOH B 26 626 86 HOH HOH . H 4 HOH B 27 627 57 HOH HOH . H 4 HOH B 28 628 119 HOH HOH . H 4 HOH B 29 629 48 HOH HOH . H 4 HOH B 30 630 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLC . . . F 3 -23.72 33.842 29.8 1 39.87 ? C1 GLC 502 B 1 HETATM 2 C C2 GLC . . . F 3 -24.211 35.094 29.062 1 42.93 ? C2 GLC 502 B 1 HETATM 3 C C3 GLC . . . F 3 -25.726 35.064 28.857 1 40.87 ? C3 GLC 502 B 1 HETATM 4 C C4 GLC . . . F 3 -26.17 33.749 28.228 1 38.27 ? C4 GLC 502 B 1 HETATM 5 C C5 GLC . . . F 3 -25.648 32.58 29.058 1 35.58 ? C5 GLC 502 B 1 HETATM 6 C C6 GLC . . . F 3 -25.969 31.232 28.477 1 37.1 ? C6 GLC 502 B 1 HETATM 7 O O1 GLC . . . F 3 -24.186 33.868 31.086 1 41.75 ? O1 GLC 502 B 1 HETATM 8 O O2 GLC . . . F 3 -23.84 36.238 29.824 1 45.12 ? O2 GLC 502 B 1 HETATM 9 O O3 GLC . . . F 3 -26.147 36.136 28.019 1 41.57 ? O3 GLC 502 B 1 HETATM 10 O O4 GLC . . . F 3 -27.591 33.719 28.166 1 41.05 ? O4 GLC 502 B 1 HETATM 11 O O5 GLC . . . F 3 -24.211 32.658 29.165 1 38.68 ? O5 GLC 502 B 1 HETATM 12 O O6 GLC . . . F 3 -25.289 31.023 27.244 1 41.35 ? O6 GLC 502 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 12 #