data_7T7Q # _model_server_result.job_id EMnSp_YvFC11Pk5jjdAMSA _model_server_result.datetime_utc '2024-11-23 23:51:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t7q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7T7Q # _exptl.entry_id 7T7Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-NADPH _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7T7Q _cell.length_a 78.875 _cell.length_b 78.875 _cell.length_c 107.993 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T7Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDW _chem_comp.mon_nstd_flag . _chem_comp.name alpha-NADPH _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '[[(2~{R},3~{S},4~{R},5~{S})-5-(3-aminocarbonyl-4~{H}-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A NDW doub 283 n y N1A C6A NDW sing 284 n y N6A C6A NDW sing 285 n n C2A N3A NDW sing 286 n y C6A C5A NDW doub 287 n y N3A C4A NDW doub 288 n y C5A C4A NDW sing 289 n y C5A N7A NDW sing 290 n y C4A N9A NDW sing 291 n y N7A C8A NDW doub 292 n y N9A C8A NDW sing 293 n y N9A C1B NDW sing 294 n n C1B O4B NDW sing 295 n n C1B C2B NDW sing 296 n n O3X P2B NDW doub 297 n n O4B C4B NDW sing 298 n n C2B O2B NDW sing 299 n n C2B C3B NDW sing 300 n n O2B P2B NDW sing 301 n n O2X P2B NDW sing 302 n n P2B O1X NDW sing 303 n n C4B C3B NDW sing 304 n n C4B C5B NDW sing 305 n n C3B O3B NDW sing 306 n n O1A PA NDW doub 307 n n O2A PA NDW sing 308 n n C5B O5B NDW sing 309 n n O5B PA NDW sing 310 n n PA O3 NDW sing 311 n n O7N C7N NDW doub 312 n n O3 PN NDW sing 313 n n O1N PN NDW doub 314 n n C7N N7N NDW sing 315 n n C7N C3N NDW sing 316 n n O2N PN NDW sing 317 n n PN O5D NDW sing 318 n n C2N C3N NDW doub 319 n n C2N N1N NDW sing 320 n n C3N C4N NDW sing 321 n n C1D O4D NDW sing 322 n n C1D N1N NDW sing 323 n n C1D C2D NDW sing 324 n n O4D C4D NDW sing 325 n n O5D C5D NDW sing 326 n n N1N C6N NDW sing 327 n n C4N C5N NDW sing 328 n n C2D C3D NDW sing 329 n n C2D O2D NDW sing 330 n n C5D C4D NDW sing 331 n n C4D C3D NDW sing 332 n n C6N C5N NDW doub 333 n n C3D O3D NDW sing 334 n n O2A H1 NDW sing 335 n n C5B H2 NDW sing 336 n n C5B H3 NDW sing 337 n n C4B H4 NDW sing 338 n n C3B H5 NDW sing 339 n n O3B H6 NDW sing 340 n n C2B H7 NDW sing 341 n n C1B H8 NDW sing 342 n n C8A H9 NDW sing 343 n n N6A H10 NDW sing 344 n n N6A H11 NDW sing 345 n n C2A H12 NDW sing 346 n n O2N H13 NDW sing 347 n n C5D H14 NDW sing 348 n n C5D H15 NDW sing 349 n n C4D H16 NDW sing 350 n n C3D H17 NDW sing 351 n n O3D H18 NDW sing 352 n n C2D H19 NDW sing 353 n n O2D H20 NDW sing 354 n n C1D H21 NDW sing 355 n n C2N H23 NDW sing 356 n n N7N H26 NDW sing 357 n n N7N H27 NDW sing 358 n n C4N H28 NDW sing 359 n n C4N H29 NDW sing 360 n n C5N H30 NDW sing 361 n n C6N H32 NDW sing 362 n n O1X H34 NDW sing 363 n n O2X H35 NDW sing 364 n n # _atom_sites.entry_id 7T7Q _atom_sites.fract_transf_matrix[1][1] 0.012678 _atom_sites.fract_transf_matrix[1][2] 0.00732 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01464 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00926 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDW X 1 201 201 NDW ANA . C 3 06U X 1 202 1 06U 06U . D 4 ACT X 1 203 701 ACT ACT . E 5 HOH X 1 301 14 HOH HOH . E 5 HOH X 2 302 6 HOH HOH . E 5 HOH X 3 303 27 HOH HOH . E 5 HOH X 4 304 14 HOH HOH . E 5 HOH X 5 305 2 HOH HOH . E 5 HOH X 6 306 5 HOH HOH . E 5 HOH X 7 307 7 HOH HOH . E 5 HOH X 8 308 23 HOH HOH . E 5 HOH X 9 309 15 HOH HOH . E 5 HOH X 10 310 33 HOH HOH . E 5 HOH X 11 311 13 HOH HOH . E 5 HOH X 12 312 28 HOH HOH . E 5 HOH X 13 313 11 HOH HOH . E 5 HOH X 14 314 4 HOH HOH . E 5 HOH X 15 315 29 HOH HOH . E 5 HOH X 16 316 11 HOH HOH . E 5 HOH X 17 317 8 HOH HOH . E 5 HOH X 18 318 3 HOH HOH . E 5 HOH X 19 319 10 HOH HOH . E 5 HOH X 20 320 16 HOH HOH . E 5 HOH X 21 321 1 HOH HOH . E 5 HOH X 22 322 30 HOH HOH . E 5 HOH X 23 323 24 HOH HOH . E 5 HOH X 24 324 6 HOH HOH . E 5 HOH X 25 325 12 HOH HOH . E 5 HOH X 26 326 17 HOH HOH . E 5 HOH X 27 327 25 HOH HOH . E 5 HOH X 28 328 8 HOH HOH . E 5 HOH X 29 329 12 HOH HOH . E 5 HOH X 30 330 18 HOH HOH . E 5 HOH X 31 331 5 HOH HOH . E 5 HOH X 32 332 32 HOH HOH . E 5 HOH X 33 333 3 HOH HOH . E 5 HOH X 34 334 13 HOH HOH . E 5 HOH X 35 335 4 HOH HOH . E 5 HOH X 36 336 1 HOH HOH . E 5 HOH X 37 337 21 HOH HOH . E 5 HOH X 38 338 26 HOH HOH . E 5 HOH X 39 339 31 HOH HOH . E 5 HOH X 40 340 22 HOH HOH . E 5 HOH X 41 341 10 HOH HOH . E 5 HOH X 42 342 19 HOH HOH . E 5 HOH X 43 343 9 HOH HOH . E 5 HOH X 44 344 9 HOH HOH . E 5 HOH X 45 345 2 HOH HOH . E 5 HOH X 46 346 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDW . . . B 2 46.638 37.109 114.092 1 27.32 ? PA NDW 201 X 1 HETATM 2 O O1A NDW . . . B 2 47.039 38.36 113.403 1 22.22 ? O1A NDW 201 X 1 HETATM 3 O O2A NDW . . . B 2 45.404 36.434 113.646 1 25.19 ? O2A NDW 201 X 1 HETATM 4 O O5B NDW . . . B 2 47.831 36.053 114.062 1 28.98 ? O5B NDW 201 X 1 HETATM 5 C C5B NDW . . . B 2 49.17 36.516 113.833 1 28.97 ? C5B NDW 201 X 1 HETATM 6 C C4B NDW . . . B 2 49.962 35.421 113.178 1 27.68 ? C4B NDW 201 X 1 HETATM 7 O O4B NDW . . . B 2 49.744 35.478 111.749 1 35.79 ? O4B NDW 201 X 1 HETATM 8 C C3B NDW . . . B 2 51.483 35.522 113.304 1 24.89 ? C3B NDW 201 X 1 HETATM 9 O O3B NDW . . . B 2 51.948 35.147 114.591 1 26.97 ? O3B NDW 201 X 1 HETATM 10 C C2B NDW . . . B 2 51.886 34.604 112.164 1 28.79 ? C2B NDW 201 X 1 HETATM 11 O O2B NDW . . . B 2 51.499 33.276 112.455 1 34.85 ? O2B NDW 201 X 1 HETATM 12 C C1B NDW . . . B 2 50.923 35.086 111.089 1 29.94 ? C1B NDW 201 X 1 HETATM 13 N N9A NDW . . . B 2 51.43 36.202 110.307 1 27.73 ? N9A NDW 201 X 1 HETATM 14 C C8A NDW . . . B 2 51.118 37.527 110.454 1 27.87 ? C8A NDW 201 X 1 HETATM 15 N N7A NDW . . . B 2 51.742 38.298 109.607 1 27.33 ? N7A NDW 201 X 1 HETATM 16 C C5A NDW . . . B 2 52.505 37.432 108.848 1 31.11 ? C5A NDW 201 X 1 HETATM 17 C C6A NDW . . . B 2 53.378 37.645 107.769 1 27.78 ? C6A NDW 201 X 1 HETATM 18 N N6A NDW . . . B 2 53.639 38.843 107.263 1 26.44 ? N6A NDW 201 X 1 HETATM 19 N N1A NDW . . . B 2 53.971 36.559 107.225 1 36.83 ? N1A NDW 201 X 1 HETATM 20 C C2A NDW . . . B 2 53.701 35.358 107.745 1 31.25 ? C2A NDW 201 X 1 HETATM 21 N N3A NDW . . . B 2 52.898 35.039 108.752 1 31.13 ? N3A NDW 201 X 1 HETATM 22 C C4A NDW . . . B 2 52.323 36.133 109.27 1 32.64 ? C4A NDW 201 X 1 HETATM 23 O O3 NDW . . . B 2 46.507 37.391 115.652 1 23.57 ? O3 NDW 201 X 1 HETATM 24 P PN NDW . . . B 2 47.239 38.438 116.6 1 22.71 ? PN NDW 201 X 1 HETATM 25 O O1N NDW . . . B 2 48.685 38.406 116.308 1 31.79 ? O1N NDW 201 X 1 HETATM 26 O O2N NDW . . . B 2 46.544 39.737 116.507 1 25.54 ? O2N NDW 201 X 1 HETATM 27 O O5D NDW . . . B 2 46.998 37.812 118.035 1 19.74 ? O5D NDW 201 X 1 HETATM 28 C C5D NDW . . . B 2 46.168 38.558 118.927 1 22.72 ? C5D NDW 201 X 1 HETATM 29 C C4D NDW . . . B 2 44.898 37.784 119.155 1 20.63 ? C4D NDW 201 X 1 HETATM 30 O O4D NDW . . . B 2 44.1 37.786 117.949 1 27.2 ? O4D NDW 201 X 1 HETATM 31 C C3D NDW . . . B 2 45.078 36.318 119.551 1 22.53 ? C3D NDW 201 X 1 HETATM 32 O O3D NDW . . . B 2 44.968 36.194 120.958 1 30.74 ? O3D NDW 201 X 1 HETATM 33 C C2D NDW . . . B 2 43.931 35.611 118.837 1 29.21 ? C2D NDW 201 X 1 HETATM 34 O O2D NDW . . . B 2 43.067 34.995 119.77 1 38.01 ? O2D NDW 201 X 1 HETATM 35 C C1D NDW . . . B 2 43.299 36.641 117.904 1 26.82 ? C1D NDW 201 X 1 HETATM 36 N N1N NDW . . . B 2 41.88 37.021 118.179 1 30.82 ? N1N NDW 201 X 1 HETATM 37 C C2N NDW . . . B 2 41.038 37.274 117.143 1 24.27 ? C2N NDW 201 X 1 HETATM 38 C C3N NDW . . . B 2 39.826 37.83 117.376 1 25.76 ? C3N NDW 201 X 1 HETATM 39 C C7N NDW . . . B 2 39.3 38.718 116.346 1 20.62 ? C7N NDW 201 X 1 HETATM 40 O O7N NDW . . . B 2 39.891 38.804 115.272 1 25.12 ? O7N NDW 201 X 1 HETATM 41 N N7N NDW . . . B 2 38.192 39.39 116.597 1 25.26 ? N7N NDW 201 X 1 HETATM 42 C C4N NDW . . . B 2 39.132 37.483 118.637 1 27.97 ? C4N NDW 201 X 1 HETATM 43 C C5N NDW . . . B 2 40.074 36.979 119.629 1 30.57 ? C5N NDW 201 X 1 HETATM 44 C C6N NDW . . . B 2 41.349 37.194 119.433 1 22.13 ? C6N NDW 201 X 1 HETATM 45 P P2B NDW . . . B 2 52.748 32.369 112.813 1 33.21 ? P2B NDW 201 X 1 HETATM 46 O O1X NDW . . . B 2 53.278 32.764 114.153 1 18.15 ? O1X NDW 201 X 1 HETATM 47 O O2X NDW . . . B 2 52.216 30.979 112.807 1 30.33 ? O2X NDW 201 X 1 HETATM 48 O O3X NDW . . . B 2 53.727 32.609 111.725 1 24.88 ? O3X NDW 201 X 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 48 #