data_7T88 # _model_server_result.job_id fU7SC0HPElHxb6BMxski2w _model_server_result.datetime_utc '2024-10-11 06:26:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t88 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":810}' # _entry.id 7T88 # _exptl.entry_id 7T88 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T88 _cell.length_a 72.875 _cell.length_b 72.875 _cell.length_c 193.248 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T88 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 96.624 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 129 A GLY 512 1_555 F K K . A K 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc2 A O HIS 132 A HIS 515 1_555 F K K . A K 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? metalc ? metalc3 A OD1 ASP 306 A ASP 689 1_555 F K K . A K 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc4 A OD2 ASP 306 A ASP 689 1_555 F K K . A K 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.088 ? metalc ? metalc5 A O LEU 307 A LEU 690 1_555 F K K . A K 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc6 C O1 EDO . A EDO 802 1_555 F K K . A K 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.025 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7T88 _atom_sites.fract_transf_matrix[1][1] 0.013722 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005175 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 801 801 EDO EDO . C 2 EDO A 1 802 802 EDO EDO . D 2 EDO A 1 803 803 EDO EDO . E 2 EDO A 1 804 804 EDO EDO . F 3 K A 1 805 1 K K . G 4 CL A 1 806 1 CL CL . H 5 PO4 A 1 807 1 PO4 PO4 . I 5 PO4 A 1 808 2 PO4 PO4 . J 6 IOD A 1 809 1 IOD IOD . K 6 IOD A 1 810 2 IOD IOD . L 7 NA A 1 811 1 NA NA . M 8 HOH A 1 901 19 HOH HOH . M 8 HOH A 2 902 3 HOH HOH . M 8 HOH A 3 903 42 HOH HOH . M 8 HOH A 4 904 25 HOH HOH . M 8 HOH A 5 905 2 HOH HOH . M 8 HOH A 6 906 17 HOH HOH . M 8 HOH A 7 907 23 HOH HOH . M 8 HOH A 8 908 13 HOH HOH . M 8 HOH A 9 909 27 HOH HOH . M 8 HOH A 10 910 1 HOH HOH . M 8 HOH A 11 911 20 HOH HOH . M 8 HOH A 12 912 29 HOH HOH . M 8 HOH A 13 913 12 HOH HOH . M 8 HOH A 14 914 18 HOH HOH . M 8 HOH A 15 915 47 HOH HOH . M 8 HOH A 16 916 21 HOH HOH . M 8 HOH A 17 917 15 HOH HOH . M 8 HOH A 18 918 44 HOH HOH . M 8 HOH A 19 919 22 HOH HOH . M 8 HOH A 20 920 8 HOH HOH . M 8 HOH A 21 921 5 HOH HOH . M 8 HOH A 22 922 6 HOH HOH . M 8 HOH A 23 923 36 HOH HOH . M 8 HOH A 24 924 33 HOH HOH . M 8 HOH A 25 925 24 HOH HOH . M 8 HOH A 26 926 28 HOH HOH . M 8 HOH A 27 927 14 HOH HOH . M 8 HOH A 28 928 38 HOH HOH . M 8 HOH A 29 929 7 HOH HOH . M 8 HOH A 30 930 26 HOH HOH . M 8 HOH A 31 931 9 HOH HOH . M 8 HOH A 32 932 40 HOH HOH . M 8 HOH A 33 933 4 HOH HOH . M 8 HOH A 34 934 10 HOH HOH . M 8 HOH A 35 935 11 HOH HOH . M 8 HOH A 36 936 16 HOH HOH . M 8 HOH A 37 937 50 HOH HOH . M 8 HOH A 38 938 48 HOH HOH . M 8 HOH A 39 939 41 HOH HOH . M 8 HOH A 40 940 46 HOH HOH . M 8 HOH A 41 941 49 HOH HOH . M 8 HOH A 42 942 39 HOH HOH . M 8 HOH A 43 943 45 HOH HOH . M 8 HOH A 44 944 51 HOH HOH . M 8 HOH A 45 945 53 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 6 _atom_site.Cartn_x -4.223 _atom_site.Cartn_y -11.434 _atom_site.Cartn_z 49.09 _atom_site.occupancy 0.28 _atom_site.B_iso_or_equiv 72.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 810 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #