data_7T8R # _model_server_result.job_id P3JAB2xxdd1QhcvsiQHLtg _model_server_result.datetime_utc '2024-11-01 02:20:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t8r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":604}' # _entry.id 7T8R # _exptl.entry_id 7T8R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.536 _cell.angle_gamma 90 _cell.entry_id 7T8R _cell.length_a 98.546 _cell.length_b 79.98 _cell.length_c 51.876 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T8R _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7T8R _atom_sites.fract_transf_matrix[1][1] 0.010148 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004632 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012503 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 601 601 EDO EDO . D 3 EDO A 1 602 701 EDO EDO . E 4 GOL A 1 603 801 GOL GOL . F 3 EDO A 1 604 901 EDO EDO . G 3 EDO A 1 605 1001 EDO EDO . H 3 EDO A 1 606 1101 EDO EDO . I 3 EDO A 1 607 601 EDO EDO . J 5 HOH A 1 701 191 HOH HOH . J 5 HOH A 2 702 197 HOH HOH . J 5 HOH A 3 703 43 HOH HOH . J 5 HOH A 4 704 217 HOH HOH . J 5 HOH A 5 705 21 HOH HOH . J 5 HOH A 6 706 303 HOH HOH . J 5 HOH A 7 707 33 HOH HOH . J 5 HOH A 8 708 168 HOH HOH . J 5 HOH A 9 709 6 HOH HOH . J 5 HOH A 10 710 70 HOH HOH . J 5 HOH A 11 711 160 HOH HOH . J 5 HOH A 12 712 181 HOH HOH . J 5 HOH A 13 713 255 HOH HOH . J 5 HOH A 14 714 91 HOH HOH . J 5 HOH A 15 715 157 HOH HOH . J 5 HOH A 16 716 34 HOH HOH . J 5 HOH A 17 717 37 HOH HOH . J 5 HOH A 18 718 55 HOH HOH . J 5 HOH A 19 719 127 HOH HOH . J 5 HOH A 20 720 203 HOH HOH . J 5 HOH A 21 721 23 HOH HOH . J 5 HOH A 22 722 16 HOH HOH . J 5 HOH A 23 723 65 HOH HOH . J 5 HOH A 24 724 15 HOH HOH . J 5 HOH A 25 725 215 HOH HOH . J 5 HOH A 26 726 152 HOH HOH . J 5 HOH A 27 727 101 HOH HOH . J 5 HOH A 28 728 2 HOH HOH . J 5 HOH A 29 729 8 HOH HOH . J 5 HOH A 30 730 105 HOH HOH . J 5 HOH A 31 731 236 HOH HOH . J 5 HOH A 32 732 158 HOH HOH . J 5 HOH A 33 733 117 HOH HOH . J 5 HOH A 34 734 143 HOH HOH . J 5 HOH A 35 735 92 HOH HOH . J 5 HOH A 36 736 178 HOH HOH . J 5 HOH A 37 737 111 HOH HOH . J 5 HOH A 38 738 64 HOH HOH . J 5 HOH A 39 739 310 HOH HOH . J 5 HOH A 40 740 82 HOH HOH . J 5 HOH A 41 741 36 HOH HOH . J 5 HOH A 42 742 48 HOH HOH . J 5 HOH A 43 743 133 HOH HOH . J 5 HOH A 44 744 108 HOH HOH . J 5 HOH A 45 745 38 HOH HOH . J 5 HOH A 46 746 219 HOH HOH . J 5 HOH A 47 747 122 HOH HOH . J 5 HOH A 48 748 16 HOH HOH . J 5 HOH A 49 749 315 HOH HOH . J 5 HOH A 50 750 50 HOH HOH . J 5 HOH A 51 751 237 HOH HOH . J 5 HOH A 52 752 235 HOH HOH . J 5 HOH A 53 753 89 HOH HOH . J 5 HOH A 54 754 120 HOH HOH . J 5 HOH A 55 755 179 HOH HOH . J 5 HOH A 56 756 312 HOH HOH . J 5 HOH A 57 757 220 HOH HOH . J 5 HOH A 58 758 21 HOH HOH . J 5 HOH A 59 759 30 HOH HOH . J 5 HOH A 60 760 5 HOH HOH . J 5 HOH A 61 761 228 HOH HOH . J 5 HOH A 62 762 25 HOH HOH . J 5 HOH A 63 763 93 HOH HOH . J 5 HOH A 64 764 126 HOH HOH . J 5 HOH A 65 765 124 HOH HOH . J 5 HOH A 66 766 10 HOH HOH . J 5 HOH A 67 767 39 HOH HOH . J 5 HOH A 68 768 103 HOH HOH . J 5 HOH A 69 769 74 HOH HOH . J 5 HOH A 70 770 159 HOH HOH . J 5 HOH A 71 771 54 HOH HOH . J 5 HOH A 72 772 196 HOH HOH . J 5 HOH A 73 773 167 HOH HOH . J 5 HOH A 74 774 86 HOH HOH . J 5 HOH A 75 775 31 HOH HOH . J 5 HOH A 76 776 146 HOH HOH . J 5 HOH A 77 777 24 HOH HOH . J 5 HOH A 78 778 140 HOH HOH . J 5 HOH A 79 779 52 HOH HOH . J 5 HOH A 80 780 22 HOH HOH . J 5 HOH A 81 781 307 HOH HOH . J 5 HOH A 82 782 1 HOH HOH . J 5 HOH A 83 783 257 HOH HOH . J 5 HOH A 84 784 180 HOH HOH . J 5 HOH A 85 785 192 HOH HOH . J 5 HOH A 86 786 225 HOH HOH . J 5 HOH A 87 787 170 HOH HOH . J 5 HOH A 88 788 5 HOH HOH . J 5 HOH A 89 789 201 HOH HOH . J 5 HOH A 90 790 72 HOH HOH . J 5 HOH A 91 791 231 HOH HOH . J 5 HOH A 92 792 232 HOH HOH . J 5 HOH A 93 793 206 HOH HOH . J 5 HOH A 94 794 173 HOH HOH . J 5 HOH A 95 795 262 HOH HOH . J 5 HOH A 96 796 56 HOH HOH . J 5 HOH A 97 797 63 HOH HOH . J 5 HOH A 98 798 97 HOH HOH . J 5 HOH A 99 799 147 HOH HOH . J 5 HOH A 100 800 99 HOH HOH . J 5 HOH A 101 801 279 HOH HOH . J 5 HOH A 102 802 11 HOH HOH . J 5 HOH A 103 803 131 HOH HOH . J 5 HOH A 104 804 151 HOH HOH . J 5 HOH A 105 805 110 HOH HOH . J 5 HOH A 106 806 211 HOH HOH . J 5 HOH A 107 807 47 HOH HOH . J 5 HOH A 108 808 212 HOH HOH . J 5 HOH A 109 809 18 HOH HOH . J 5 HOH A 110 810 129 HOH HOH . J 5 HOH A 111 811 200 HOH HOH . J 5 HOH A 112 812 2 HOH HOH . J 5 HOH A 113 813 156 HOH HOH . J 5 HOH A 114 814 193 HOH HOH . J 5 HOH A 115 815 209 HOH HOH . J 5 HOH A 116 816 27 HOH HOH . J 5 HOH A 117 817 137 HOH HOH . J 5 HOH A 118 818 85 HOH HOH . J 5 HOH A 119 819 46 HOH HOH . J 5 HOH A 120 820 188 HOH HOH . J 5 HOH A 121 821 9 HOH HOH . J 5 HOH A 122 822 29 HOH HOH . J 5 HOH A 123 823 174 HOH HOH . J 5 HOH A 124 824 13 HOH HOH . J 5 HOH A 125 825 39 HOH HOH . J 5 HOH A 126 826 44 HOH HOH . J 5 HOH A 127 827 12 HOH HOH . J 5 HOH A 128 828 153 HOH HOH . J 5 HOH A 129 829 136 HOH HOH . J 5 HOH A 130 830 75 HOH HOH . J 5 HOH A 131 831 45 HOH HOH . J 5 HOH A 132 832 35 HOH HOH . J 5 HOH A 133 833 118 HOH HOH . J 5 HOH A 134 834 125 HOH HOH . J 5 HOH A 135 835 15 HOH HOH . J 5 HOH A 136 836 98 HOH HOH . J 5 HOH A 137 837 67 HOH HOH . J 5 HOH A 138 838 134 HOH HOH . J 5 HOH A 139 839 202 HOH HOH . J 5 HOH A 140 840 41 HOH HOH . J 5 HOH A 141 841 57 HOH HOH . J 5 HOH A 142 842 17 HOH HOH . J 5 HOH A 143 843 296 HOH HOH . J 5 HOH A 144 844 145 HOH HOH . J 5 HOH A 145 845 112 HOH HOH . J 5 HOH A 146 846 114 HOH HOH . J 5 HOH A 147 847 73 HOH HOH . J 5 HOH A 148 848 190 HOH HOH . J 5 HOH A 149 849 289 HOH HOH . J 5 HOH A 150 850 76 HOH HOH . J 5 HOH A 151 851 78 HOH HOH . J 5 HOH A 152 852 177 HOH HOH . J 5 HOH A 153 853 295 HOH HOH . J 5 HOH A 154 854 139 HOH HOH . J 5 HOH A 155 855 171 HOH HOH . J 5 HOH A 156 856 161 HOH HOH . J 5 HOH A 157 857 104 HOH HOH . J 5 HOH A 158 858 40 HOH HOH . J 5 HOH A 159 859 223 HOH HOH . J 5 HOH A 160 860 230 HOH HOH . J 5 HOH A 161 861 148 HOH HOH . J 5 HOH A 162 862 9 HOH HOH . J 5 HOH A 163 863 68 HOH HOH . J 5 HOH A 164 864 116 HOH HOH . J 5 HOH A 165 865 109 HOH HOH . J 5 HOH A 166 866 293 HOH HOH . J 5 HOH A 167 867 184 HOH HOH . J 5 HOH A 168 868 221 HOH HOH . J 5 HOH A 169 869 95 HOH HOH . J 5 HOH A 170 870 14 HOH HOH . J 5 HOH A 171 871 205 HOH HOH . J 5 HOH A 172 872 35 HOH HOH . J 5 HOH A 173 873 142 HOH HOH . J 5 HOH A 174 874 6 HOH HOH . J 5 HOH A 175 875 28 HOH HOH . J 5 HOH A 176 876 247 HOH HOH . J 5 HOH A 177 877 7 HOH HOH . J 5 HOH A 178 878 288 HOH HOH . J 5 HOH A 179 879 49 HOH HOH . J 5 HOH A 180 880 79 HOH HOH . J 5 HOH A 181 881 292 HOH HOH . J 5 HOH A 182 882 216 HOH HOH . J 5 HOH A 183 883 51 HOH HOH . J 5 HOH A 184 884 239 HOH HOH . J 5 HOH A 185 885 138 HOH HOH . J 5 HOH A 186 886 204 HOH HOH . J 5 HOH A 187 887 53 HOH HOH . J 5 HOH A 188 888 69 HOH HOH . J 5 HOH A 189 889 287 HOH HOH . J 5 HOH A 190 890 256 HOH HOH . J 5 HOH A 191 891 18 HOH HOH . J 5 HOH A 192 892 194 HOH HOH . J 5 HOH A 193 893 107 HOH HOH . J 5 HOH A 194 894 3 HOH HOH . J 5 HOH A 195 895 128 HOH HOH . J 5 HOH A 196 896 7 HOH HOH . J 5 HOH A 197 897 19 HOH HOH . J 5 HOH A 198 898 238 HOH HOH . J 5 HOH A 199 899 37 HOH HOH . J 5 HOH A 200 900 164 HOH HOH . J 5 HOH A 201 901 102 HOH HOH . J 5 HOH A 202 902 19 HOH HOH . J 5 HOH A 203 903 58 HOH HOH . J 5 HOH A 204 904 4 HOH HOH . J 5 HOH A 205 905 218 HOH HOH . J 5 HOH A 206 906 163 HOH HOH . J 5 HOH A 207 907 186 HOH HOH . J 5 HOH A 208 908 20 HOH HOH . J 5 HOH A 209 909 14 HOH HOH . J 5 HOH A 210 910 182 HOH HOH . J 5 HOH A 211 911 316 HOH HOH . J 5 HOH A 212 912 242 HOH HOH . J 5 HOH A 213 913 25 HOH HOH . J 5 HOH A 214 914 183 HOH HOH . J 5 HOH A 215 915 248 HOH HOH . J 5 HOH A 216 916 291 HOH HOH . J 5 HOH A 217 917 298 HOH HOH . J 5 HOH A 218 918 81 HOH HOH . J 5 HOH A 219 919 144 HOH HOH . J 5 HOH A 220 920 251 HOH HOH . J 5 HOH A 221 921 263 HOH HOH . J 5 HOH A 222 922 302 HOH HOH . J 5 HOH A 223 923 241 HOH HOH . J 5 HOH A 224 924 199 HOH HOH . J 5 HOH A 225 925 252 HOH HOH . J 5 HOH A 226 926 260 HOH HOH . J 5 HOH A 227 927 280 HOH HOH . J 5 HOH A 228 928 150 HOH HOH . J 5 HOH A 229 929 306 HOH HOH . J 5 HOH A 230 930 244 HOH HOH . J 5 HOH A 231 931 300 HOH HOH . J 5 HOH A 232 932 17 HOH HOH . J 5 HOH A 233 933 80 HOH HOH . J 5 HOH A 234 934 317 HOH HOH . J 5 HOH A 235 935 10 HOH HOH . J 5 HOH A 236 936 273 HOH HOH . J 5 HOH A 237 937 36 HOH HOH . J 5 HOH A 238 938 38 HOH HOH . J 5 HOH A 239 939 71 HOH HOH . J 5 HOH A 240 940 155 HOH HOH . J 5 HOH A 241 941 208 HOH HOH . J 5 HOH A 242 942 172 HOH HOH . J 5 HOH A 243 943 305 HOH HOH . J 5 HOH A 244 944 26 HOH HOH . J 5 HOH A 245 945 299 HOH HOH . J 5 HOH A 246 946 246 HOH HOH . J 5 HOH A 247 947 20 HOH HOH . J 5 HOH A 248 948 115 HOH HOH . J 5 HOH A 249 949 30 HOH HOH . J 5 HOH A 250 950 23 HOH HOH . J 5 HOH A 251 951 135 HOH HOH . J 5 HOH A 252 952 290 HOH HOH . J 5 HOH A 253 953 198 HOH HOH . J 5 HOH A 254 954 165 HOH HOH . J 5 HOH A 255 955 40 HOH HOH . J 5 HOH A 256 956 94 HOH HOH . J 5 HOH A 257 957 83 HOH HOH . J 5 HOH A 258 958 233 HOH HOH . J 5 HOH A 259 959 169 HOH HOH . J 5 HOH A 260 960 29 HOH HOH . J 5 HOH A 261 961 189 HOH HOH . J 5 HOH A 262 962 130 HOH HOH . J 5 HOH A 263 963 175 HOH HOH . J 5 HOH A 264 964 243 HOH HOH . J 5 HOH A 265 965 301 HOH HOH . J 5 HOH A 266 966 249 HOH HOH . J 5 HOH A 267 967 96 HOH HOH . J 5 HOH A 268 968 229 HOH HOH . J 5 HOH A 269 969 278 HOH HOH . J 5 HOH A 270 970 277 HOH HOH . J 5 HOH A 271 971 12 HOH HOH . J 5 HOH A 272 972 87 HOH HOH . J 5 HOH A 273 973 27 HOH HOH . J 5 HOH A 274 974 281 HOH HOH . J 5 HOH A 275 975 149 HOH HOH . J 5 HOH A 276 976 1 HOH HOH . J 5 HOH A 277 977 234 HOH HOH . J 5 HOH A 278 978 314 HOH HOH . J 5 HOH A 279 979 8 HOH HOH . J 5 HOH A 280 980 77 HOH HOH . J 5 HOH A 281 981 59 HOH HOH . J 5 HOH A 282 982 245 HOH HOH . J 5 HOH A 283 983 34 HOH HOH . J 5 HOH A 284 984 195 HOH HOH . J 5 HOH A 285 985 253 HOH HOH . J 5 HOH A 286 986 31 HOH HOH . J 5 HOH A 287 987 141 HOH HOH . J 5 HOH A 288 988 132 HOH HOH . J 5 HOH A 289 989 224 HOH HOH . J 5 HOH A 290 990 32 HOH HOH . J 5 HOH A 291 991 162 HOH HOH . J 5 HOH A 292 992 227 HOH HOH . J 5 HOH A 293 993 84 HOH HOH . J 5 HOH A 294 994 210 HOH HOH . J 5 HOH A 295 995 106 HOH HOH . J 5 HOH A 296 996 222 HOH HOH . J 5 HOH A 297 997 26 HOH HOH . J 5 HOH A 298 998 226 HOH HOH . J 5 HOH A 299 999 100 HOH HOH . J 5 HOH A 300 1000 123 HOH HOH . J 5 HOH A 301 1001 22 HOH HOH . J 5 HOH A 302 1002 240 HOH HOH . J 5 HOH A 303 1003 121 HOH HOH . J 5 HOH A 304 1004 113 HOH HOH . J 5 HOH A 305 1005 294 HOH HOH . J 5 HOH A 306 1006 254 HOH HOH . J 5 HOH A 307 1007 304 HOH HOH . J 5 HOH A 308 1008 4 HOH HOH . J 5 HOH A 309 1009 207 HOH HOH . J 5 HOH A 310 1010 270 HOH HOH . J 5 HOH A 311 1011 13 HOH HOH . J 5 HOH A 312 1012 28 HOH HOH . J 5 HOH A 313 1013 297 HOH HOH . J 5 HOH A 314 1014 311 HOH HOH . K 5 HOH B 1 201 283 HOH HOH . K 5 HOH B 2 202 282 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 3 -1.717 30.357 5.199 1 26.04 ? C1 EDO 604 A 1 HETATM 2 O O1 EDO . . . F 3 -3.123 30.411 5.337 1 32.36 ? O1 EDO 604 A 1 HETATM 3 C C2 EDO . . . F 3 -1.263 30.361 3.686 1 27.65 ? C2 EDO 604 A 1 HETATM 4 O O2 EDO . . . F 3 -2.218 30.948 2.762 1 39.16 ? O2 EDO 604 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #