data_7T9C # _model_server_result.job_id eGNHOISqFLBs97P39xUeKw _model_server_result.datetime_utc '2024-10-20 20:38:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7T9C # _exptl.entry_id 7T9C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T9C _cell.length_a 58.451 _cell.length_b 66.792 _cell.length_c 67.951 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,P 1 1 B,L,M,N,O,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 L FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc3 L FE HEM . B HEM 201 1_555 Q O HOH . B HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 142 n n CHA C4D HEM doub 143 n n CHA HHA HEM sing 144 n n CHB C4A HEM sing 145 n n CHB C1B HEM doub 146 n n CHB HHB HEM sing 147 n n CHC C4B HEM sing 148 n n CHC C1C HEM doub 149 n n CHC HHC HEM sing 150 n n CHD C4C HEM doub 151 n n CHD C1D HEM sing 152 n n CHD HHD HEM sing 153 n n C1A C2A HEM doub 154 n y C1A NA HEM sing 155 n y C2A C3A HEM sing 156 n y C2A CAA HEM sing 157 n n C3A C4A HEM doub 158 n y C3A CMA HEM sing 159 n n C4A NA HEM sing 160 n y CMA HMA HEM sing 161 n n CMA HMAA HEM sing 162 n n CMA HMAB HEM sing 163 n n CAA CBA HEM sing 164 n n CAA HAA HEM sing 165 n n CAA HAAA HEM sing 166 n n CBA CGA HEM sing 167 n n CBA HBA HEM sing 168 n n CBA HBAA HEM sing 169 n n CGA O1A HEM doub 170 n n CGA O2A HEM sing 171 n n C1B C2B HEM sing 172 n n C1B NB HEM sing 173 n n C2B C3B HEM doub 174 n n C2B CMB HEM sing 175 n n C3B C4B HEM sing 176 n n C3B CAB HEM sing 177 n n C4B NB HEM doub 178 n n CMB HMB HEM sing 179 n n CMB HMBA HEM sing 180 n n CMB HMBB HEM sing 181 n n CAB CBB HEM doub 182 n n CAB HAB HEM sing 183 n n CBB HBB HEM sing 184 n n CBB HBBA HEM sing 185 n n C1C C2C HEM sing 186 n y C1C NC HEM sing 187 n y C2C C3C HEM doub 188 n y C2C CMC HEM sing 189 n n C3C C4C HEM sing 190 n y C3C CAC HEM sing 191 n n C4C NC HEM sing 192 n y CMC HMC HEM sing 193 n n CMC HMCA HEM sing 194 n n CMC HMCB HEM sing 195 n n CAC CBC HEM doub 196 n n CAC HAC HEM sing 197 n n CBC HBC HEM sing 198 n n CBC HBCA HEM sing 199 n n C1D C2D HEM sing 200 n n C1D ND HEM doub 201 n n C2D C3D HEM doub 202 n n C2D CMD HEM sing 203 n n C3D C4D HEM sing 204 n n C3D CAD HEM sing 205 n n C4D ND HEM sing 206 n n CMD HMD HEM sing 207 n n CMD HMDA HEM sing 208 n n CMD HMDB HEM sing 209 n n CAD CBD HEM sing 210 n n CAD HAD HEM sing 211 n n CAD HADA HEM sing 212 n n CBD CGD HEM sing 213 n n CBD HBD HEM sing 214 n n CBD HBDA HEM sing 215 n n CGD O1D HEM doub 216 n n CGD O2D HEM sing 217 n n O2A H2A HEM sing 218 n n O2D H2D HEM sing 219 n n FE NA HEM sing 220 n n FE NB HEM sing 221 n n FE NC HEM sing 222 n n FE ND HEM sing 223 n n # _atom_sites.entry_id 7T9C _atom_sites.fract_transf_matrix[1][1] 0.017108 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014972 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014716 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 201 139 HEM HEM . D 3 GOL A 1 202 141 GOL GOL . E 3 GOL A 1 203 142 GOL GOL . F 3 GOL A 1 204 143 GOL GOL . G 3 GOL A 1 205 144 GOL GOL . H 3 GOL A 1 206 145 GOL GOL . I 4 IPB A 1 207 146 IPB TM1 . J 5 SO4 A 1 208 1 SO4 SO4 . K 5 SO4 A 1 209 2 SO4 SO4 . L 2 HEM B 1 201 139 HEM HEM . M 4 IPB B 1 202 140 IPB TM1 . N 3 GOL B 1 203 141 GOL GOL . O 3 GOL B 1 204 142 GOL GOL . P 6 HOH A 1 301 51 HOH HOH . P 6 HOH A 2 302 73 HOH HOH . P 6 HOH A 3 303 107 HOH HOH . P 6 HOH A 4 304 109 HOH HOH . P 6 HOH A 5 305 38 HOH HOH . P 6 HOH A 6 306 95 HOH HOH . P 6 HOH A 7 307 27 HOH HOH . P 6 HOH A 8 308 46 HOH HOH . P 6 HOH A 9 309 40 HOH HOH . P 6 HOH A 10 310 36 HOH HOH . P 6 HOH A 11 311 71 HOH HOH . P 6 HOH A 12 312 57 HOH HOH . P 6 HOH A 13 313 113 HOH HOH . P 6 HOH A 14 314 52 HOH HOH . P 6 HOH A 15 315 12 HOH HOH . P 6 HOH A 16 316 76 HOH HOH . P 6 HOH A 17 317 28 HOH HOH . P 6 HOH A 18 318 112 HOH HOH . P 6 HOH A 19 319 19 HOH HOH . P 6 HOH A 20 320 14 HOH HOH . P 6 HOH A 21 321 15 HOH HOH . P 6 HOH A 22 322 66 HOH HOH . P 6 HOH A 23 323 121 HOH HOH . P 6 HOH A 24 324 37 HOH HOH . P 6 HOH A 25 325 44 HOH HOH . P 6 HOH A 26 326 104 HOH HOH . P 6 HOH A 27 327 16 HOH HOH . P 6 HOH A 28 328 34 HOH HOH . P 6 HOH A 29 329 77 HOH HOH . P 6 HOH A 30 330 5 HOH HOH . P 6 HOH A 31 331 110 HOH HOH . P 6 HOH A 32 332 26 HOH HOH . P 6 HOH A 33 333 35 HOH HOH . P 6 HOH A 34 334 18 HOH HOH . P 6 HOH A 35 335 25 HOH HOH . P 6 HOH A 36 336 7 HOH HOH . P 6 HOH A 37 337 21 HOH HOH . P 6 HOH A 38 338 83 HOH HOH . P 6 HOH A 39 339 42 HOH HOH . P 6 HOH A 40 340 111 HOH HOH . P 6 HOH A 41 341 64 HOH HOH . P 6 HOH A 42 342 59 HOH HOH . P 6 HOH A 43 343 69 HOH HOH . P 6 HOH A 44 344 108 HOH HOH . P 6 HOH A 45 345 53 HOH HOH . P 6 HOH A 46 346 88 HOH HOH . P 6 HOH A 47 347 54 HOH HOH . P 6 HOH A 48 348 63 HOH HOH . P 6 HOH A 49 349 30 HOH HOH . P 6 HOH A 50 350 94 HOH HOH . P 6 HOH A 51 351 84 HOH HOH . P 6 HOH A 52 352 81 HOH HOH . P 6 HOH A 53 353 90 HOH HOH . P 6 HOH A 54 354 82 HOH HOH . P 6 HOH A 55 355 87 HOH HOH . P 6 HOH A 56 356 39 HOH HOH . Q 6 HOH B 1 301 86 HOH HOH . Q 6 HOH B 2 302 115 HOH HOH . Q 6 HOH B 3 303 70 HOH HOH . Q 6 HOH B 4 304 117 HOH HOH . Q 6 HOH B 5 305 49 HOH HOH . Q 6 HOH B 6 306 74 HOH HOH . Q 6 HOH B 7 307 114 HOH HOH . Q 6 HOH B 8 308 31 HOH HOH . Q 6 HOH B 9 309 50 HOH HOH . Q 6 HOH B 10 310 61 HOH HOH . Q 6 HOH B 11 311 56 HOH HOH . Q 6 HOH B 12 312 106 HOH HOH . Q 6 HOH B 13 313 123 HOH HOH . Q 6 HOH B 14 314 65 HOH HOH . Q 6 HOH B 15 315 6 HOH HOH . Q 6 HOH B 16 316 120 HOH HOH . Q 6 HOH B 17 317 47 HOH HOH . Q 6 HOH B 18 318 11 HOH HOH . Q 6 HOH B 19 319 122 HOH HOH . Q 6 HOH B 20 320 45 HOH HOH . Q 6 HOH B 21 321 13 HOH HOH . Q 6 HOH B 22 322 116 HOH HOH . Q 6 HOH B 23 323 118 HOH HOH . Q 6 HOH B 24 324 24 HOH HOH . Q 6 HOH B 25 325 43 HOH HOH . Q 6 HOH B 26 326 60 HOH HOH . Q 6 HOH B 27 327 89 HOH HOH . Q 6 HOH B 28 328 78 HOH HOH . Q 6 HOH B 29 329 72 HOH HOH . Q 6 HOH B 30 330 17 HOH HOH . Q 6 HOH B 31 331 29 HOH HOH . Q 6 HOH B 32 332 33 HOH HOH . Q 6 HOH B 33 333 67 HOH HOH . Q 6 HOH B 34 334 91 HOH HOH . Q 6 HOH B 35 335 23 HOH HOH . Q 6 HOH B 36 336 3 HOH HOH . Q 6 HOH B 37 337 80 HOH HOH . Q 6 HOH B 38 338 55 HOH HOH . Q 6 HOH B 39 339 20 HOH HOH . Q 6 HOH B 40 340 32 HOH HOH . Q 6 HOH B 41 341 58 HOH HOH . Q 6 HOH B 42 342 75 HOH HOH . Q 6 HOH B 43 343 98 HOH HOH . Q 6 HOH B 44 344 41 HOH HOH . Q 6 HOH B 45 345 102 HOH HOH . Q 6 HOH B 46 346 22 HOH HOH . Q 6 HOH B 47 347 68 HOH HOH . Q 6 HOH B 48 348 62 HOH HOH . Q 6 HOH B 49 349 119 HOH HOH . Q 6 HOH B 50 350 93 HOH HOH . Q 6 HOH B 51 351 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . C 2 4.902 -6.482 10.998 1 30.33 0 CHA HEM 201 A 1 HETATM 2 C CHB HEM . . . C 2 3.637 -7.308 15.62 1 38.7 0 CHB HEM 201 A 1 HETATM 3 C CHC HEM . . . C 2 7.876 -5.415 17.12 1 36.11 0 CHC HEM 201 A 1 HETATM 4 C CHD HEM . . . C 2 8.959 -4.492 12.494 1 32.97 0 CHD HEM 201 A 1 HETATM 5 C C1A HEM . . . C 2 4.214 -6.837 12.14 1 34.51 0 C1A HEM 201 A 1 HETATM 6 C C2A HEM . . . C 2 2.879 -7.296 12.149 1 40.24 0 C2A HEM 201 A 1 HETATM 7 C C3A HEM . . . C 2 2.536 -7.516 13.442 1 40.36 0 C3A HEM 201 A 1 HETATM 8 C C4A HEM . . . C 2 3.635 -7.205 14.241 1 35.38 0 C4A HEM 201 A 1 HETATM 9 C CMA HEM . . . C 2 1.219 -8.04 13.984 1 39.84 0 CMA HEM 201 A 1 HETATM 10 C CAA HEM . . . C 2 1.988 -7.546 10.952 1 49.12 0 CAA HEM 201 A 1 HETATM 11 C CBA HEM . . . C 2 0.853 -6.509 10.811 1 58.2 0 CBA HEM 201 A 1 HETATM 12 C CGA HEM . . . C 2 0.633 -6.046 9.37 1 64.22 0 CGA HEM 201 A 1 HETATM 13 O O1A HEM . . . C 2 -0.519 -5.696 9.022 1 64.36 0 O1A HEM 201 A 1 HETATM 14 O O2A HEM . . . C 2 1.582 -5.985 8.53 1 70.87 0 O2A HEM 201 A 1 HETATM 15 C C1B HEM . . . C 2 4.689 -6.868 16.441 1 38.21 0 C1B HEM 201 A 1 HETATM 16 C C2B HEM . . . C 2 4.655 -6.906 17.879 1 39.11 0 C2B HEM 201 A 1 HETATM 17 C C3B HEM . . . C 2 5.837 -6.364 18.328 1 38.39 0 C3B HEM 201 A 1 HETATM 18 C C4B HEM . . . C 2 6.599 -6.005 17.086 1 38.53 0 C4B HEM 201 A 1 HETATM 19 C CMB HEM . . . C 2 3.529 -7.432 18.74 1 37.45 0 CMB HEM 201 A 1 HETATM 20 C CAB HEM . . . C 2 6.348 -6.182 19.72 1 39.55 0 CAB HEM 201 A 1 HETATM 21 C CBB HEM . . . C 2 5.734 -6.622 20.827 1 41.64 0 CBB HEM 201 A 1 HETATM 22 C C1C HEM . . . C 2 8.553 -4.965 15.98 1 36.73 0 C1C HEM 201 A 1 HETATM 23 C C2C HEM . . . C 2 9.784 -4.257 15.942 1 34.4 0 C2C HEM 201 A 1 HETATM 24 C C3C HEM . . . C 2 10.08 -3.997 14.593 1 36.49 0 C3C HEM 201 A 1 HETATM 25 C C4C HEM . . . C 2 9.01 -4.55 13.845 1 36.23 0 C4C HEM 201 A 1 HETATM 26 C CMC HEM . . . C 2 10.616 -3.882 17.15 1 37.2 0 CMC HEM 201 A 1 HETATM 27 C CAC HEM . . . C 2 11.24 -3.288 13.969 1 37.99 0 CAC HEM 201 A 1 HETATM 28 C CBC HEM . . . C 2 12.189 -2.652 14.671 1 39.42 0 CBC HEM 201 A 1 HETATM 29 C C1D HEM . . . C 2 7.904 -4.995 11.779 1 33.44 0 C1D HEM 201 A 1 HETATM 30 C C2D HEM . . . C 2 7.933 -4.821 10.338 1 30.57 0 C2D HEM 201 A 1 HETATM 31 C C3D HEM . . . C 2 6.821 -5.353 9.905 1 34.46 0 C3D HEM 201 A 1 HETATM 32 C C4D HEM . . . C 2 6.113 -5.847 11.103 1 28.49 0 C4D HEM 201 A 1 HETATM 33 C CMD HEM . . . C 2 8.999 -4.182 9.477 1 34.86 0 CMD HEM 201 A 1 HETATM 34 C CAD HEM . . . C 2 6.387 -5.446 8.46 1 38.75 0 CAD HEM 201 A 1 HETATM 35 C CBD HEM . . . C 2 6.66 -4.245 7.558 1 45.85 0 CBD HEM 201 A 1 HETATM 36 C CGD HEM . . . C 2 5.725 -3.098 7.873 1 51.87 0 CGD HEM 201 A 1 HETATM 37 O O1D HEM . . . C 2 5.134 -2.498 6.938 1 55.46 0 O1D HEM 201 A 1 HETATM 38 O O2D HEM . . . C 2 5.538 -2.736 9.055 0.2 52.53 0 O2D HEM 201 A 1 HETATM 39 N NA HEM . . . C 2 4.635 -6.787 13.429 1 32.01 0 NA HEM 201 A 1 HETATM 40 N NB HEM . . . C 2 5.838 -6.322 16.011 1 37.69 0 NB HEM 201 A 1 HETATM 41 N NC HEM . . . C 2 8.109 -5.133 14.7 1 33.35 0 NC HEM 201 A 1 HETATM 42 N ND HEM . . . C 2 6.787 -5.595 12.222 1 28.18 0 ND HEM 201 A 1 HETATM 43 FE FE HEM . . . C 2 6.388 -6.069 13.989 1 36.7 0 FE HEM 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 43 #