data_7T9R
#
_model_server_result.job_id            1RIrp5I1tAXBF_ZQagpjmg 
_model_server_result.datetime_utc      '2025-01-06 06:30:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7t9r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":102}' 
#
_entry.id    7T9R 
#
_exptl.entry_id    7T9R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90.093 
_cell.angle_beta          90.016 
_cell.angle_gamma         90.014 
_cell.entry_id            7T9R 
_cell.length_a            27.056 
_cell.length_b            33.694 
_cell.length_c            36.642 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7T9R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
PISA monomeric 1 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,I,J,Q 1 1 
B,K,R 2 1 
C,L,M,N,S 3 1 
D,O,P,T 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 M N N 
? 2 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 8 A CYS 8 1_555 A SG CYS 36 A CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf2 A SG CYS 15 A CYS 15 1_555 A SG CYS 29 A CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf3 A SG CYS 19 A CYS 19 1_555 A SG CYS 37 A CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
disulf ? disulf4 B SG CYS 8 B CYS 8 1_555 B SG CYS 36 B CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 B SG CYS 15 B CYS 15 1_555 B SG CYS 29 B CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf6 B SG CYS 19 B CYS 19 1_555 B SG CYS 37 B CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf7 C SG CYS 8 C CYS 8 1_555 C SG CYS 36 C CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf8 C SG CYS 15 C CYS 15 1_555 C SG CYS 29 C CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf9 C SG CYS 19 C CYS 19 1_555 C SG CYS 37 C CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf10 D SG CYS 8 D CYS 8 1_555 D SG CYS 36 D CYS 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf11 D SG CYS 15 D CYS 15 1_555 D SG CYS 29 D CYS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf12 D SG CYS 19 D CYS 19 1_555 D SG CYS 37 D CYS 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 56 n n 
C1 C2 EDO sing 57 n n 
C1 H11 EDO sing 58 n n 
C1 H12 EDO sing 59 n n 
O1 HO1 EDO sing 60 n n 
C2 O2 EDO sing 61 n n 
C2 H21 EDO sing 62 n n 
C2 H22 EDO sing 63 n n 
O2 HO2 EDO sing 64 n n 
#
_atom_sites.entry_id                     7T9R 
_atom_sites.fract_transf_matrix[1][1]    0.03696 
_atom_sites.fract_transf_matrix[1][2]    0.000009 
_atom_sites.fract_transf_matrix[1][3]    0.00001 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.029679 
_atom_sites.fract_transf_matrix[2][3]    0.000048 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.027291 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 EDO A 1 101 101 EDO EDO . 
F 3 PA6 A 1 102 201 PA6 PA6 . 
G 3 PA6 A 1 103 301 PA6 PA6 . 
H 4 PO4 A 1 104 1 PO4 PO4 . 
I 4 PO4 A 1 105 2 PO4 PO4 . 
J 4 PO4 A 1 106 3 PO4 PO4 . 
K 3 PA6 B 1 201 201 PA6 PA6 . 
L 3 PA6 C 1 101 101 PA6 PA6 . 
M 2 EDO C 1 102 201 EDO EDO . 
N 4 PO4 C 1 103 9 PO4 PO4 . 
O 2 EDO D 1 101 101 EDO EDO . 
P 4 PO4 D 1 102 8 PO4 PO4 . 
Q 5 HOH A 1 201 79 HOH HOH . 
Q 5 HOH A 2 202 54 HOH HOH . 
Q 5 HOH A 3 203 55 HOH HOH . 
Q 5 HOH A 4 204 32 HOH HOH . 
Q 5 HOH A 5 205 136 HOH HOH . 
Q 5 HOH A 6 206 113 HOH HOH . 
Q 5 HOH A 7 207 10 HOH HOH . 
Q 5 HOH A 8 208 101 HOH HOH . 
Q 5 HOH A 9 209 27 HOH HOH . 
Q 5 HOH A 10 210 90 HOH HOH . 
Q 5 HOH A 11 211 81 HOH HOH . 
Q 5 HOH A 12 212 35 HOH HOH . 
Q 5 HOH A 13 213 24 HOH HOH . 
Q 5 HOH A 14 214 7 HOH HOH . 
Q 5 HOH A 15 215 8 HOH HOH . 
Q 5 HOH A 16 216 64 HOH HOH . 
Q 5 HOH A 17 217 1 HOH HOH . 
Q 5 HOH A 18 218 52 HOH HOH . 
Q 5 HOH A 19 219 78 HOH HOH . 
Q 5 HOH A 20 220 39 HOH HOH . 
Q 5 HOH A 21 221 12 HOH HOH . 
Q 5 HOH A 22 222 66 HOH HOH . 
Q 5 HOH A 23 223 122 HOH HOH . 
Q 5 HOH A 24 224 100 HOH HOH . 
Q 5 HOH A 25 225 40 HOH HOH . 
Q 5 HOH A 26 226 130 HOH HOH . 
Q 5 HOH A 27 227 131 HOH HOH . 
Q 5 HOH A 28 228 45 HOH HOH . 
Q 5 HOH A 29 229 77 HOH HOH . 
Q 5 HOH A 30 230 135 HOH HOH . 
Q 5 HOH A 31 231 148 HOH HOH . 
R 5 HOH B 1 301 125 HOH HOH . 
R 5 HOH B 2 302 119 HOH HOH . 
R 5 HOH B 3 303 6 HOH HOH . 
R 5 HOH B 4 304 38 HOH HOH . 
R 5 HOH B 5 305 96 HOH HOH . 
R 5 HOH B 6 306 145 HOH HOH . 
R 5 HOH B 7 307 28 HOH HOH . 
R 5 HOH B 8 308 47 HOH HOH . 
R 5 HOH B 9 309 147 HOH HOH . 
R 5 HOH B 10 310 86 HOH HOH . 
R 5 HOH B 11 311 4 HOH HOH . 
R 5 HOH B 12 312 102 HOH HOH . 
R 5 HOH B 13 313 15 HOH HOH . 
R 5 HOH B 14 314 29 HOH HOH . 
R 5 HOH B 15 315 127 HOH HOH . 
R 5 HOH B 16 316 34 HOH HOH . 
R 5 HOH B 17 317 111 HOH HOH . 
R 5 HOH B 18 318 57 HOH HOH . 
R 5 HOH B 19 319 19 HOH HOH . 
R 5 HOH B 20 320 72 HOH HOH . 
R 5 HOH B 21 321 106 HOH HOH . 
R 5 HOH B 22 322 138 HOH HOH . 
R 5 HOH B 23 323 44 HOH HOH . 
R 5 HOH B 24 324 129 HOH HOH . 
R 5 HOH B 25 325 172 HOH HOH . 
R 5 HOH B 26 326 132 HOH HOH . 
R 5 HOH B 27 327 36 HOH HOH . 
R 5 HOH B 28 328 141 HOH HOH . 
R 5 HOH B 29 329 108 HOH HOH . 
R 5 HOH B 30 330 150 HOH HOH . 
R 5 HOH B 31 331 97 HOH HOH . 
R 5 HOH B 32 332 139 HOH HOH . 
R 5 HOH B 33 333 117 HOH HOH . 
R 5 HOH B 34 334 171 HOH HOH . 
R 5 HOH B 35 335 31 HOH HOH . 
R 5 HOH B 36 336 53 HOH HOH . 
S 5 HOH C 1 201 124 HOH HOH . 
S 5 HOH C 2 202 85 HOH HOH . 
S 5 HOH C 3 203 94 HOH HOH . 
S 5 HOH C 4 204 61 HOH HOH . 
S 5 HOH C 5 205 87 HOH HOH . 
S 5 HOH C 6 206 75 HOH HOH . 
S 5 HOH C 7 207 175 HOH HOH . 
S 5 HOH C 8 208 51 HOH HOH . 
S 5 HOH C 9 209 63 HOH HOH . 
S 5 HOH C 10 210 22 HOH HOH . 
S 5 HOH C 11 211 42 HOH HOH . 
S 5 HOH C 12 212 59 HOH HOH . 
S 5 HOH C 13 213 41 HOH HOH . 
S 5 HOH C 14 214 21 HOH HOH . 
S 5 HOH C 15 215 14 HOH HOH . 
S 5 HOH C 16 216 49 HOH HOH . 
S 5 HOH C 17 217 126 HOH HOH . 
S 5 HOH C 18 218 107 HOH HOH . 
S 5 HOH C 19 219 5 HOH HOH . 
S 5 HOH C 20 220 88 HOH HOH . 
S 5 HOH C 21 221 3 HOH HOH . 
S 5 HOH C 22 222 60 HOH HOH . 
S 5 HOH C 23 223 99 HOH HOH . 
S 5 HOH C 24 224 146 HOH HOH . 
S 5 HOH C 25 225 161 HOH HOH . 
S 5 HOH C 26 226 80 HOH HOH . 
S 5 HOH C 27 227 11 HOH HOH . 
S 5 HOH C 28 228 163 HOH HOH . 
S 5 HOH C 29 229 110 HOH HOH . 
S 5 HOH C 30 230 104 HOH HOH . 
S 5 HOH C 31 231 169 HOH HOH . 
S 5 HOH C 32 232 121 HOH HOH . 
S 5 HOH C 33 233 109 HOH HOH . 
S 5 HOH C 34 234 149 HOH HOH . 
S 5 HOH C 35 235 23 HOH HOH . 
S 5 HOH C 36 236 95 HOH HOH . 
T 5 HOH D 1 201 25 HOH HOH . 
T 5 HOH D 2 202 114 HOH HOH . 
T 5 HOH D 3 203 133 HOH HOH . 
T 5 HOH D 4 204 134 HOH HOH . 
T 5 HOH D 5 205 69 HOH HOH . 
T 5 HOH D 6 206 17 HOH HOH . 
T 5 HOH D 7 207 152 HOH HOH . 
T 5 HOH D 8 208 48 HOH HOH . 
T 5 HOH D 9 209 9 HOH HOH . 
T 5 HOH D 10 210 162 HOH HOH . 
T 5 HOH D 11 211 92 HOH HOH . 
T 5 HOH D 12 212 56 HOH HOH . 
T 5 HOH D 13 213 74 HOH HOH . 
T 5 HOH D 14 214 76 HOH HOH . 
T 5 HOH D 15 215 13 HOH HOH . 
T 5 HOH D 16 216 33 HOH HOH . 
T 5 HOH D 17 217 174 HOH HOH . 
T 5 HOH D 18 218 84 HOH HOH . 
T 5 HOH D 19 219 58 HOH HOH . 
T 5 HOH D 20 220 65 HOH HOH . 
T 5 HOH D 21 221 37 HOH HOH . 
T 5 HOH D 22 222 16 HOH HOH . 
T 5 HOH D 23 223 93 HOH HOH . 
T 5 HOH D 24 224 26 HOH HOH . 
T 5 HOH D 25 225 167 HOH HOH . 
T 5 HOH D 26 226 115 HOH HOH . 
T 5 HOH D 27 227 177 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . M 2 24.22 4.04 3.264 1 16.17 ? C1 EDO 102 C 1 
HETATM 2 O O1 EDO . . . M 2 24.269 3.987 4.691 1 11.1 ? O1 EDO 102 C 1 
HETATM 3 C C2 EDO . . . M 2 22.786 3.905 2.744 1 33.95 ? C2 EDO 102 C 1 
HETATM 4 O O2 EDO . . . M 2 21.863 3.731 3.815 1 32.59 ? O2 EDO 102 C 1 
HETATM 5 H H11 EDO . . . M 2 24.831 3.234 2.852 1 19.43 ? H11 EDO 102 C 1 
HETATM 6 H H12 EDO . . . M 2 24.641 4.988 2.923 1 19.43 ? H12 EDO 102 C 1 
HETATM 7 H HO1 EDO . . . M 2 25.184 4.094 4.986 1 13.34 ? HO1 EDO 102 C 1 
HETATM 8 H H21 EDO . . . M 2 22.724 3.05 2.068 1 40.76 ? H21 EDO 102 C 1 
HETATM 9 H H22 EDO . . . M 2 22.52 4.8 2.177 1 40.76 ? H22 EDO 102 C 1 
HETATM 10 H HO2 EDO . . . M 2 20.973 3.962 3.515 1 39.13 ? HO2 EDO 102 C 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           10 
#