data_7TCH
#
_model_server_result.job_id            pkubLp8BscC9uCW4EfKdBQ 
_model_server_result.datetime_utc      '2025-03-06 08:31:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7tch 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":701}' 
#
_entry.id    7TCH 
#
_exptl.entry_id    7TCH 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              842.178 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-amino-4-deoxy-1-O-[(S)-hydroxy{[(2E,6E,10Z,14Z,18Z,22E,26E,30E)-3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaen-1-yl]oxy}phosphoryl]-alpha-L-arabinopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7TCH 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7TCH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C50 H84 N O7 P' 
_chem_comp.formula_weight    842.178 
_chem_comp.id                I0O 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-amino-4-deoxy-1-O-[(S)-hydroxy{[(2E,6E,10Z,14Z,18Z,22E,26E,30E)-3,7,11,15,19,23,27,31,35-nonamethylhexatriaconta-2,6,10,14,18,22,26,30,34-nonaen-1-yl]oxy}phosphoryl]-alpha-L-arabinopyranose 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N16 C9 I0O sing 199 n n 
C9 C8 I0O sing 200 n n 
C9 C10 I0O sing 201 n n 
C8 O15 I0O sing 202 n n 
C8 C7 I0O sing 203 n n 
C10 O11 I0O sing 204 n n 
O14 C7 I0O sing 205 n n 
C7 C6 I0O sing 206 n n 
O11 C6 I0O sing 207 n n 
C6 O5 I0O sing 208 n n 
O4 P2 I0O doub 209 n n 
O5 P2 I0O sing 210 n n 
P2 O1 I0O sing 211 n n 
P2 O3 I0O sing 212 n n 
O1 C1 I0O sing 213 n n 
C1 C2 I0O sing 214 n n 
C2 C3 I0O doub 215 e n 
C13 C3 I0O sing 216 n n 
C3 C4 I0O sing 217 n n 
C4 C5 I0O sing 218 n n 
C5 C11 I0O sing 219 n n 
C11 C12 I0O doub 220 e n 
C14 C12 I0O sing 221 n n 
C12 C15 I0O sing 222 n n 
C15 C16 I0O sing 223 n n 
C16 C17 I0O sing 224 n n 
C17 C18 I0O doub 225 z n 
C18 C19 I0O sing 226 n n 
C18 C20 I0O sing 227 n n 
C20 C21 I0O sing 228 n n 
C21 C22 I0O sing 229 n n 
C22 C23 I0O doub 230 z n 
C44 C43 I0O sing 231 n n 
C23 C24 I0O sing 232 n n 
C23 C25 I0O sing 233 n n 
C50 C48 I0O sing 234 n n 
C25 C26 I0O sing 235 n n 
C41 C40 I0O sing 236 n n 
C41 C42 I0O sing 237 n n 
C43 C42 I0O doub 238 e n 
C43 C45 I0O sing 239 n n 
C40 C38 I0O sing 240 n n 
C48 C47 I0O doub 241 n n 
C48 C49 I0O sing 242 n n 
C47 C46 I0O sing 243 n n 
C26 C27 I0O sing 244 n n 
C45 C46 I0O sing 245 n n 
C39 C38 I0O sing 246 n n 
C38 C37 I0O doub 247 e n 
C27 C28 I0O doub 248 z n 
C37 C36 I0O sing 249 n n 
C28 C30 I0O sing 250 n n 
C28 C29 I0O sing 251 n n 
C30 C31 I0O sing 252 n n 
C36 C35 I0O sing 253 n n 
C31 C32 I0O sing 254 n n 
C32 C33 I0O doub 255 e n 
C35 C33 I0O sing 256 n n 
C33 C34 I0O sing 257 n n 
C1 H1 I0O sing 258 n n 
C1 H2 I0O sing 259 n n 
C2 H3 I0O sing 260 n n 
C4 H4 I0O sing 261 n n 
C4 H5 I0O sing 262 n n 
C5 H6 I0O sing 263 n n 
C5 H7 I0O sing 264 n n 
C6 H8 I0O sing 265 n n 
C7 H9 I0O sing 266 n n 
C9 H10 I0O sing 267 n n 
C15 H11 I0O sing 268 n n 
C15 H12 I0O sing 269 n n 
C16 H13 I0O sing 270 n n 
C16 H14 I0O sing 271 n n 
C17 H15 I0O sing 272 n n 
C19 H16 I0O sing 273 n n 
C19 H17 I0O sing 274 n n 
C19 H18 I0O sing 275 n n 
C24 H19 I0O sing 276 n n 
C24 H20 I0O sing 277 n n 
C24 H21 I0O sing 278 n n 
C25 H22 I0O sing 279 n n 
C25 H23 I0O sing 280 n n 
C26 H24 I0O sing 281 n n 
C26 H25 I0O sing 282 n n 
C27 H26 I0O sing 283 n n 
C29 H27 I0O sing 284 n n 
C29 H28 I0O sing 285 n n 
C29 H29 I0O sing 286 n n 
C36 H30 I0O sing 287 n n 
C36 H31 I0O sing 288 n n 
C37 H32 I0O sing 289 n n 
C39 H33 I0O sing 290 n n 
C39 H34 I0O sing 291 n n 
C39 H35 I0O sing 292 n n 
C40 H36 I0O sing 293 n n 
C40 H37 I0O sing 294 n n 
C10 H38 I0O sing 295 n n 
C10 H39 I0O sing 296 n n 
C11 H40 I0O sing 297 n n 
C13 H41 I0O sing 298 n n 
C13 H42 I0O sing 299 n n 
C13 H43 I0O sing 300 n n 
C14 H44 I0O sing 301 n n 
C14 H45 I0O sing 302 n n 
C14 H46 I0O sing 303 n n 
C20 H47 I0O sing 304 n n 
C20 H48 I0O sing 305 n n 
C21 H49 I0O sing 306 n n 
C21 H50 I0O sing 307 n n 
C22 H51 I0O sing 308 n n 
C30 H52 I0O sing 309 n n 
C30 H53 I0O sing 310 n n 
C31 H54 I0O sing 311 n n 
C31 H55 I0O sing 312 n n 
C32 H56 I0O sing 313 n n 
C34 H57 I0O sing 314 n n 
C34 H58 I0O sing 315 n n 
C34 H59 I0O sing 316 n n 
C35 H60 I0O sing 317 n n 
C35 H61 I0O sing 318 n n 
C41 H62 I0O sing 319 n n 
C41 H63 I0O sing 320 n n 
C42 H64 I0O sing 321 n n 
C44 H65 I0O sing 322 n n 
C44 H66 I0O sing 323 n n 
C44 H67 I0O sing 324 n n 
C45 H68 I0O sing 325 n n 
C45 H69 I0O sing 326 n n 
C46 H70 I0O sing 327 n n 
C46 H71 I0O sing 328 n n 
C47 H72 I0O sing 329 n n 
C49 H73 I0O sing 330 n n 
C49 H74 I0O sing 331 n n 
C49 H75 I0O sing 332 n n 
C50 H76 I0O sing 333 n n 
C50 H77 I0O sing 334 n n 
C50 H78 I0O sing 335 n n 
C8 H79 I0O sing 336 n n 
N16 H80 I0O sing 337 n n 
N16 H81 I0O sing 338 n n 
O14 H83 I0O sing 339 n n 
O15 H84 I0O sing 340 n n 
O3 H85 I0O sing 341 n n 
#
_atom_sites.entry_id                     7TCH 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 I0O A 1 701 701 I0O AUP . 
E 4 ATP B 1 301 301 ATP ATP . 
F 4 ATP C 1 301 301 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 I0O . . . D 3 131.869 119.313 99.307 1 33.09 ? C1 I0O 701 A 1 
HETATM 2 C C2 I0O . . . D 3 132.67 120.18 100.223 1 33.09 ? C2 I0O 701 A 1 
HETATM 3 C C3 I0O . . . D 3 133.84 119.809 100.731 1 33.09 ? C3 I0O 701 A 1 
HETATM 4 C C4 I0O . . . D 3 134.806 120.807 101.306 1 33.09 ? C4 I0O 701 A 1 
HETATM 5 C C5 I0O . . . D 3 134.22 121.673 102.398 1 33.09 ? C5 I0O 701 A 1 
HETATM 6 C C6 I0O . . . D 3 132.729 118.258 95.026 1 33.09 ? C6 I0O 701 A 1 
HETATM 7 C C7 I0O . . . D 3 134.132 118.555 94.511 1 33.09 ? C7 I0O 701 A 1 
HETATM 8 C C9 I0O . . . D 3 133.826 116.392 93.289 1 33.09 ? C9 I0O 701 A 1 
HETATM 9 C C15 I0O . . . D 3 135.987 124.792 103.94 1 33.09 ? C15 I0O 701 A 1 
HETATM 10 C C16 I0O . . . D 3 136.288 124.991 105.409 1 33.09 ? C16 I0O 701 A 1 
HETATM 11 C C17 I0O . . . D 3 137.037 123.854 106.032 1 33.09 ? C17 I0O 701 A 1 
HETATM 12 C C18 I0O . . . D 3 138.182 123.912 106.704 1 33.09 ? C18 I0O 701 A 1 
HETATM 13 C C19 I0O . . . D 3 138.846 122.725 107.326 1 33.09 ? C19 I0O 701 A 1 
HETATM 14 C C24 I0O . . . D 3 140.284 129.096 109.66 1 33.09 ? C24 I0O 701 A 1 
HETATM 15 C C25 I0O . . . D 3 139.585 127.051 110.974 1 33.09 ? C25 I0O 701 A 1 
HETATM 16 C C26 I0O . . . D 3 138.774 127.892 111.939 1 33.09 ? C26 I0O 701 A 1 
HETATM 17 C C27 I0O . . . D 3 137.289 127.775 111.79 1 33.09 ? C27 I0O 701 A 1 
HETATM 18 C C28 I0O . . . D 3 136.412 127.437 112.731 1 33.09 ? C28 I0O 701 A 1 
HETATM 19 C C29 I0O . . . D 3 136.809 126.947 114.089 1 33.09 ? C29 I0O 701 A 1 
HETATM 20 C C36 I0O . . . D 3 134.583 123.819 109.391 1 33.09 ? C36 I0O 701 A 1 
HETATM 21 C C37 I0O . . . D 3 134.67 122.465 108.758 1 33.09 ? C37 I0O 701 A 1 
HETATM 22 C C38 I0O . . . D 3 134.044 121.349 109.119 1 33.09 ? C38 I0O 701 A 1 
HETATM 23 C C39 I0O . . . D 3 133.055 121.277 110.242 1 33.09 ? C39 I0O 701 A 1 
HETATM 24 C C40 I0O . . . D 3 134.301 120.05 108.41 1 33.09 ? C40 I0O 701 A 1 
HETATM 25 C C10 I0O . . . D 3 132.648 116.045 94.183 1 33.09 ? C10 I0O 701 A 1 
HETATM 26 C C11 I0O . . . D 3 135.174 122.737 102.841 1 33.09 ? C11 I0O 701 A 1 
HETATM 27 C C12 I0O . . . D 3 134.949 123.737 103.687 1 33.09 ? C12 I0O 701 A 1 
HETATM 28 C C13 I0O . . . D 3 134.289 118.381 100.779 1 33.09 ? C13 I0O 701 A 1 
HETATM 29 C C14 I0O . . . D 3 133.667 123.917 104.439 1 33.09 ? C14 I0O 701 A 1 
HETATM 30 C C20 I0O . . . D 3 138.899 125.218 106.895 1 33.09 ? C20 I0O 701 A 1 
HETATM 31 C C21 I0O . . . D 3 139.025 125.622 108.348 1 33.09 ? C21 I0O 701 A 1 
HETATM 32 C C22 I0O . . . D 3 139.524 127.024 108.503 1 33.09 ? C22 I0O 701 A 1 
HETATM 33 C C23 I0O . . . D 3 139.78 127.687 109.627 1 33.09 ? C23 I0O 701 A 1 
HETATM 34 C C30 I0O . . . D 3 134.929 127.551 112.512 1 33.09 ? C30 I0O 701 A 1 
HETATM 35 C C31 I0O . . . D 3 134.48 127.735 111.076 1 33.09 ? C31 I0O 701 A 1 
HETATM 36 C C32 I0O . . . D 3 134.485 126.459 110.294 1 33.09 ? C32 I0O 701 A 1 
HETATM 37 C C33 I0O . . . D 3 134.027 126.25 109.063 1 33.09 ? C33 I0O 701 A 1 
HETATM 38 C C34 I0O . . . D 3 133.439 127.325 108.201 1 33.09 ? C34 I0O 701 A 1 
HETATM 39 C C35 I0O . . . D 3 134.056 124.88 108.447 1 33.09 ? C35 I0O 701 A 1 
HETATM 40 C C41 I0O . . . D 3 133.061 119.42 107.809 1 33.09 ? C41 I0O 701 A 1 
HETATM 41 C C42 I0O . . . D 3 132.421 120.251 106.74 1 33.09 ? C42 I0O 701 A 1 
HETATM 42 C C43 I0O . . . D 3 131.164 120.68 106.678 1 33.09 ? C43 I0O 701 A 1 
HETATM 43 C C44 I0O . . . D 3 130.126 120.358 107.709 1 33.09 ? C44 I0O 701 A 1 
HETATM 44 C C45 I0O . . . D 3 130.688 121.541 105.543 1 33.09 ? C45 I0O 701 A 1 
HETATM 45 C C46 I0O . . . D 3 130.71 120.86 104.189 1 33.09 ? C46 I0O 701 A 1 
HETATM 46 C C47 I0O . . . D 3 129.792 119.679 104.111 1 33.09 ? C47 I0O 701 A 1 
HETATM 47 C C48 I0O . . . D 3 130.05 118.468 103.644 1 33.09 ? C48 I0O 701 A 1 
HETATM 48 C C49 I0O . . . D 3 129.047 117.355 103.679 1 33.09 ? C49 I0O 701 A 1 
HETATM 49 C C50 I0O . . . D 3 131.365 118.103 103.026 1 33.09 ? C50 I0O 701 A 1 
HETATM 50 C C8 I0O . . . D 3 134.825 117.285 94.028 1 33.09 ? C8 I0O 701 A 1 
HETATM 51 N N16 I0O . . . D 3 134.461 115.195 92.717 1 33.09 ? N16 I0O 701 A 1 
HETATM 52 O O1 I0O . . . D 3 131.446 120.051 98.164 1 33.09 ? O1 I0O 701 A 1 
HETATM 53 O O11 I0O . . . D 3 132.614 116.882 95.348 1 33.09 ? O11 I0O 701 A 1 
HETATM 54 O O14 I0O . . . D 3 134.057 119.513 93.459 1 33.09 ? O14 I0O 701 A 1 
HETATM 55 O O15 I0O . . . D 3 135.359 116.575 95.139 1 33.09 ? O15 I0O 701 A 1 
HETATM 56 O O3 I0O . . . D 3 130.257 120.185 95.942 1 33.09 ? O3 I0O 701 A 1 
HETATM 57 O O4 I0O . . . D 3 130.475 117.925 97.189 1 33.09 ? O4 I0O 701 A 1 
HETATM 58 O O5 I0O . . . D 3 132.505 119.058 96.157 1 33.09 ? O5 I0O 701 A 1 
HETATM 59 P P2 I0O . . . D 3 131.056 119.263 96.821 1 33.09 ? P2 I0O 701 A 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           454 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           59 
#