data_7TCV # _model_server_result.job_id DNfl6NB8HNVVmNYZS5nT4w _model_server_result.datetime_utc '2024-11-24 07:24:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tcv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7TCV # _exptl.entry_id 7TCV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 677.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.664 _cell.angle_gamma 90 _cell.entry_id 7TCV _cell.length_a 98.197 _cell.length_b 57.8 _cell.length_c 66.44 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TCV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C36 H72 N O8 P' _chem_comp.formula_weight 677.933 _chem_comp.id MC3 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MC3 sing 218 n n C1 O3P MC3 sing 219 n n C1 H11 MC3 sing 220 n n C1 H12 MC3 sing 221 n n C2 C3 MC3 sing 222 n n C2 O2 MC3 sing 223 n n C2 H2 MC3 sing 224 n n C3 O3 MC3 sing 225 n n C3 H31 MC3 sing 226 n n C3 H32 MC3 sing 227 n n C4 C5 MC3 sing 228 n n C4 O4P MC3 sing 229 n n C4 H41 MC3 sing 230 n n C4 H42 MC3 sing 231 n n C5 N MC3 sing 232 n n C5 H51 MC3 sing 233 n n C5 H52 MC3 sing 234 n n C6 N MC3 sing 235 n n C6 H61 MC3 sing 236 n n C6 H62 MC3 sing 237 n n C6 H63 MC3 sing 238 n n C7 N MC3 sing 239 n n C7 H71 MC3 sing 240 n n C7 H72 MC3 sing 241 n n C7 H73 MC3 sing 242 n n C8 N MC3 sing 243 n n C8 H81 MC3 sing 244 n n C8 H82 MC3 sing 245 n n C8 H83 MC3 sing 246 n n C11 C12 MC3 sing 247 n n C11 O3 MC3 sing 248 n n C11 O11 MC3 doub 249 n n C12 C13 MC3 sing 250 n n C12 H121 MC3 sing 251 n n C12 H122 MC3 sing 252 n n C13 C14 MC3 sing 253 n n C13 H131 MC3 sing 254 n n C13 H132 MC3 sing 255 n n C14 C15 MC3 sing 256 n n C14 H141 MC3 sing 257 n n C14 H142 MC3 sing 258 n n C15 C16 MC3 sing 259 n n C15 H151 MC3 sing 260 n n C15 H152 MC3 sing 261 n n C16 C17 MC3 sing 262 n n C16 H161 MC3 sing 263 n n C16 H162 MC3 sing 264 n n C17 C18 MC3 sing 265 n n C17 H171 MC3 sing 266 n n C17 H172 MC3 sing 267 n n C18 C19 MC3 sing 268 n n C18 H181 MC3 sing 269 n n C18 H182 MC3 sing 270 n n C19 C20 MC3 sing 271 n n C19 H191 MC3 sing 272 n n C19 H192 MC3 sing 273 n n C20 C21 MC3 sing 274 n n C20 H201 MC3 sing 275 n n C20 H202 MC3 sing 276 n n C21 C22 MC3 sing 277 n n C21 H211 MC3 sing 278 n n C21 H212 MC3 sing 279 n n C22 C23 MC3 sing 280 n n C22 H221 MC3 sing 281 n n C22 H222 MC3 sing 282 n n C23 C24 MC3 sing 283 n n C23 H231 MC3 sing 284 n n C23 H232 MC3 sing 285 n n C24 H241 MC3 sing 286 n n C24 H242 MC3 sing 287 n n C24 H243 MC3 sing 288 n n C31 C32 MC3 sing 289 n n C31 O2 MC3 sing 290 n n C31 O31 MC3 doub 291 n n C32 C33 MC3 sing 292 n n C32 H321 MC3 sing 293 n n C32 H322 MC3 sing 294 n n C33 C34 MC3 sing 295 n n C33 H331 MC3 sing 296 n n C33 H332 MC3 sing 297 n n C34 C35 MC3 sing 298 n n C34 H341 MC3 sing 299 n n C34 H342 MC3 sing 300 n n C35 C36 MC3 sing 301 n n C35 H351 MC3 sing 302 n n C35 H352 MC3 sing 303 n n C36 C37 MC3 sing 304 n n C36 H361 MC3 sing 305 n n C36 H362 MC3 sing 306 n n C37 C38 MC3 sing 307 n n C37 H371 MC3 sing 308 n n C37 H372 MC3 sing 309 n n C38 C39 MC3 sing 310 n n C38 H381 MC3 sing 311 n n C38 H382 MC3 sing 312 n n C39 C40 MC3 sing 313 n n C39 H391 MC3 sing 314 n n C39 H392 MC3 sing 315 n n C40 C41 MC3 sing 316 n n C40 H401 MC3 sing 317 n n C40 H402 MC3 sing 318 n n C41 C42 MC3 sing 319 n n C41 H411 MC3 sing 320 n n C41 H412 MC3 sing 321 n n C42 C43 MC3 sing 322 n n C42 H421 MC3 sing 323 n n C42 H422 MC3 sing 324 n n C43 C44 MC3 sing 325 n n C43 H431 MC3 sing 326 n n C43 H432 MC3 sing 327 n n C44 H441 MC3 sing 328 n n C44 H442 MC3 sing 329 n n C44 H443 MC3 sing 330 n n O1P P MC3 doub 331 n n O2P P MC3 sing 332 n n O3P P MC3 sing 333 n n O4P P MC3 sing 334 n n # _atom_sites.entry_id 7TCV _atom_sites.fract_transf_matrix[1][1] 0.010184 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00137 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017301 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015187 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MC3 XXX 1 301 301 MC3 MC3 . C 3 HOH XXX 1 401 30 HOH HOH . C 3 HOH XXX 2 402 9 HOH HOH . C 3 HOH XXX 3 403 1 HOH HOH . C 3 HOH XXX 4 404 38 HOH HOH . C 3 HOH XXX 5 405 40 HOH HOH . C 3 HOH XXX 6 406 7 HOH HOH . C 3 HOH XXX 7 407 18 HOH HOH . C 3 HOH XXX 8 408 4 HOH HOH . C 3 HOH XXX 9 409 14 HOH HOH . C 3 HOH XXX 10 410 27 HOH HOH . C 3 HOH XXX 11 411 10 HOH HOH . C 3 HOH XXX 12 412 20 HOH HOH . C 3 HOH XXX 13 413 33 HOH HOH . C 3 HOH XXX 14 414 5 HOH HOH . C 3 HOH XXX 15 415 36 HOH HOH . C 3 HOH XXX 16 416 19 HOH HOH . C 3 HOH XXX 17 417 2 HOH HOH . C 3 HOH XXX 18 418 46 HOH HOH . C 3 HOH XXX 19 419 13 HOH HOH . C 3 HOH XXX 20 420 8 HOH HOH . C 3 HOH XXX 21 421 34 HOH HOH . C 3 HOH XXX 22 422 3 HOH HOH . C 3 HOH XXX 23 423 11 HOH HOH . C 3 HOH XXX 24 424 6 HOH HOH . C 3 HOH XXX 25 425 41 HOH HOH . C 3 HOH XXX 26 426 47 HOH HOH . C 3 HOH XXX 27 427 31 HOH HOH . C 3 HOH XXX 28 428 29 HOH HOH . C 3 HOH XXX 29 429 26 HOH HOH . C 3 HOH XXX 30 430 25 HOH HOH . C 3 HOH XXX 31 431 28 HOH HOH . C 3 HOH XXX 32 432 24 HOH HOH . C 3 HOH XXX 33 433 23 HOH HOH . C 3 HOH XXX 34 434 15 HOH HOH . C 3 HOH XXX 35 435 16 HOH HOH . C 3 HOH XXX 36 436 37 HOH HOH . C 3 HOH XXX 37 437 12 HOH HOH . C 3 HOH XXX 38 438 45 HOH HOH . C 3 HOH XXX 39 439 39 HOH HOH . C 3 HOH XXX 40 440 44 HOH HOH . C 3 HOH XXX 41 441 17 HOH HOH . C 3 HOH XXX 42 442 35 HOH HOH . C 3 HOH XXX 43 443 43 HOH HOH . C 3 HOH XXX 44 444 21 HOH HOH . C 3 HOH XXX 45 445 42 HOH HOH . C 3 HOH XXX 46 446 32 HOH HOH . C 3 HOH XXX 47 447 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MC3 . . . B 2 36.745 36.099 31.329 1 87.52 ? C1 MC3 301 XXX 1 HETATM 2 C C2 MC3 . . . B 2 35.864 35.388 32.331 1 84.84 ? C2 MC3 301 XXX 1 HETATM 3 C C3 MC3 . . . B 2 34.46 35.947 32.412 1 88.26 ? C3 MC3 301 XXX 1 HETATM 4 C C11 MC3 . . . B 2 33.331 38.019 32.335 1 74.3 ? C11 MC3 301 XXX 1 HETATM 5 C C12 MC3 . . . B 2 32.763 38.241 33.722 1 70.26 ? C12 MC3 301 XXX 1 HETATM 6 C C13 MC3 . . . B 2 31.357 37.748 33.914 1 68.05 ? C13 MC3 301 XXX 1 HETATM 7 C C14 MC3 . . . B 2 30.413 38.787 34.528 1 65.7 ? C14 MC3 301 XXX 1 HETATM 8 C C15 MC3 . . . B 2 29.002 38.264 34.783 1 64.08 ? C15 MC3 301 XXX 1 HETATM 9 C C16 MC3 . . . B 2 27.915 39.325 34.929 1 63.64 ? C16 MC3 301 XXX 1 HETATM 10 C C17 MC3 . . . B 2 26.681 39.076 34.078 1 65.61 ? C17 MC3 301 XXX 1 HETATM 11 C C18 MC3 . . . B 2 25.519 40.019 34.343 1 65.35 ? C18 MC3 301 XXX 1 HETATM 12 C C19 MC3 . . . B 2 24.644 40.295 33.137 1 59.74 ? C19 MC3 301 XXX 1 HETATM 13 C C20 MC3 . . . B 2 23.239 40.791 33.468 1 58.18 ? C20 MC3 301 XXX 1 HETATM 14 C C21 MC3 . . . B 2 22.274 40.758 32.303 1 54.24 ? C21 MC3 301 XXX 1 HETATM 15 C C22 MC3 . . . B 2 21.38 41.962 32.172 1 55.64 ? C22 MC3 301 XXX 1 HETATM 16 O O3 MC3 . . . B 2 34.505 37.392 32.37 1 84.33 ? O3 MC3 301 XXX 1 HETATM 17 O O11 MC3 . . . B 2 32.829 38.377 31.31 1 71.3 ? O11 MC3 301 XXX 1 HETATM 18 O O1P MC3 . . . B 2 38.531 39.262 32.526 1 79.99 ? O1P MC3 301 XXX 1 HETATM 19 O O2P MC3 . . . B 2 37.802 39.06 30.03 1 83.77 ? O2P MC3 301 XXX 1 HETATM 20 O O3P MC3 . . . B 2 36.853 37.496 31.723 1 93.34 ? O3P MC3 301 XXX 1 HETATM 21 P P MC3 . . . B 2 38.197 38.314 31.398 1 99.76 ? P MC3 301 XXX 1 HETATM 22 H H11 MC3 . . . B 2 36.352 36.034 30.433 1 88.15 ? H11 MC3 301 XXX 1 HETATM 23 H H12 MC3 . . . B 2 37.633 35.685 31.313 1 88.16 ? H12 MC3 301 XXX 1 HETATM 24 H H2 MC3 . . . B 2 36.284 35.456 33.225 1 86.21 ? H2 MC3 301 XXX 1 HETATM 25 H H31 MC3 . . . B 2 34.028 35.659 33.248 1 86.4 ? H31 MC3 301 XXX 1 HETATM 26 H H32 MC3 . . . B 2 33.925 35.62 31.66 1 86.28 ? H32 MC3 301 XXX 1 HETATM 27 H H121 MC3 . . . B 2 32.791 39.199 33.923 1 70.62 ? H121 MC3 301 XXX 1 HETATM 28 H H122 MC3 . . . B 2 33.34 37.79 34.372 1 70.66 ? H122 MC3 301 XXX 1 HETATM 29 H H131 MC3 . . . B 2 31.372 36.959 34.495 1 67.98 ? H131 MC3 301 XXX 1 HETATM 30 H H132 MC3 . . . B 2 30.992 37.469 33.048 1 67.99 ? H132 MC3 301 XXX 1 HETATM 31 H H141 MC3 . . . B 2 30.361 39.559 33.925 1 65.83 ? H141 MC3 301 XXX 1 HETATM 32 H H142 MC3 . . . B 2 30.794 39.096 35.377 1 65.83 ? H142 MC3 301 XXX 1 HETATM 33 H H151 MC3 . . . B 2 29.016 37.724 35.602 1 64.33 ? H151 MC3 301 XXX 1 HETATM 34 H H152 MC3 . . . B 2 28.755 37.667 34.044 1 64.34 ? H152 MC3 301 XXX 1 HETATM 35 H H161 MC3 . . . B 2 28.292 40.198 34.687 1 64.19 ? H161 MC3 301 XXX 1 HETATM 36 H H162 MC3 . . . B 2 27.644 39.37 35.87 1 64.19 ? H162 MC3 301 XXX 1 HETATM 37 H H171 MC3 . . . B 2 26.377 38.156 34.233 1 65.06 ? H171 MC3 301 XXX 1 HETATM 38 H H172 MC3 . . . B 2 26.934 39.149 33.133 1 65.05 ? H172 MC3 301 XXX 1 HETATM 39 H H181 MC3 . . . B 2 25.876 40.872 34.672 1 64.02 ? H181 MC3 301 XXX 1 HETATM 40 H H182 MC3 . . . B 2 24.962 39.637 35.055 1 64.01 ? H182 MC3 301 XXX 1 HETATM 41 H H191 MC3 . . . B 2 24.568 39.47 32.611 1 60.62 ? H191 MC3 301 XXX 1 HETATM 42 H H192 MC3 . . . B 2 25.088 40.964 32.575 1 60.62 ? H192 MC3 301 XXX 1 HETATM 43 H H201 MC3 . . . B 2 23.302 41.713 33.798 1 57.57 ? H201 MC3 301 XXX 1 HETATM 44 H H202 MC3 . . . B 2 22.874 40.241 34.193 1 57.58 ? H202 MC3 301 XXX 1 HETATM 45 H H211 MC3 . . . B 2 21.711 39.959 32.388 1 55.45 ? H211 MC3 301 XXX 1 HETATM 46 H H212 MC3 . . . B 2 22.792 40.667 31.475 1 55.41 ? H212 MC3 301 XXX 1 HETATM 47 H H221 MC3 . . . B 2 21.746 42.64 32.351 0 20 ? H221 MC3 301 XXX 1 HETATM 48 H H222 MC3 . . . B 2 20.751 41.97 32.925 1 55.2 ? H222 MC3 301 XXX 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 430 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 48 #