data_7TJ3 # _model_server_result.job_id IzkfFeYVwQZWcSZsxjidCQ _model_server_result.datetime_utc '2024-11-28 19:05:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tj3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7TJ3 # _exptl.entry_id 7TJ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TJ3 _cell.length_a 101.99 _cell.length_b 101.99 _cell.length_c 87.31 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TJ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7TJ3 _atom_sites.fract_transf_matrix[1][1] 0.009805 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 201 201 NAP NAP . C 3 MMV A 1 202 202 MMV MMV . D 4 EDO A 1 203 203 EDO EDO . E 5 GOL A 1 204 204 GOL GOL . F 6 HOH A 1 301 198 HOH HOH . F 6 HOH A 2 302 79 HOH HOH . F 6 HOH A 3 303 81 HOH HOH . F 6 HOH A 4 304 152 HOH HOH . F 6 HOH A 5 305 203 HOH HOH . F 6 HOH A 6 306 180 HOH HOH . F 6 HOH A 7 307 64 HOH HOH . F 6 HOH A 8 308 181 HOH HOH . F 6 HOH A 9 309 70 HOH HOH . F 6 HOH A 10 310 11 HOH HOH . F 6 HOH A 11 311 187 HOH HOH . F 6 HOH A 12 312 113 HOH HOH . F 6 HOH A 13 313 185 HOH HOH . F 6 HOH A 14 314 60 HOH HOH . F 6 HOH A 15 315 135 HOH HOH . F 6 HOH A 16 316 164 HOH HOH . F 6 HOH A 17 317 153 HOH HOH . F 6 HOH A 18 318 109 HOH HOH . F 6 HOH A 19 319 63 HOH HOH . F 6 HOH A 20 320 194 HOH HOH . F 6 HOH A 21 321 91 HOH HOH . F 6 HOH A 22 322 101 HOH HOH . F 6 HOH A 23 323 78 HOH HOH . F 6 HOH A 24 324 2 HOH HOH . F 6 HOH A 25 325 26 HOH HOH . F 6 HOH A 26 326 74 HOH HOH . F 6 HOH A 27 327 168 HOH HOH . F 6 HOH A 28 328 12 HOH HOH . F 6 HOH A 29 329 178 HOH HOH . F 6 HOH A 30 330 182 HOH HOH . F 6 HOH A 31 331 118 HOH HOH . F 6 HOH A 32 332 156 HOH HOH . F 6 HOH A 33 333 120 HOH HOH . F 6 HOH A 34 334 5 HOH HOH . F 6 HOH A 35 335 88 HOH HOH . F 6 HOH A 36 336 128 HOH HOH . F 6 HOH A 37 337 111 HOH HOH . F 6 HOH A 38 338 166 HOH HOH . F 6 HOH A 39 339 136 HOH HOH . F 6 HOH A 40 340 15 HOH HOH . F 6 HOH A 41 341 39 HOH HOH . F 6 HOH A 42 342 155 HOH HOH . F 6 HOH A 43 343 57 HOH HOH . F 6 HOH A 44 344 24 HOH HOH . F 6 HOH A 45 345 7 HOH HOH . F 6 HOH A 46 346 117 HOH HOH . F 6 HOH A 47 347 71 HOH HOH . F 6 HOH A 48 348 17 HOH HOH . F 6 HOH A 49 349 179 HOH HOH . F 6 HOH A 50 350 4 HOH HOH . F 6 HOH A 51 351 147 HOH HOH . F 6 HOH A 52 352 159 HOH HOH . F 6 HOH A 53 353 160 HOH HOH . F 6 HOH A 54 354 67 HOH HOH . F 6 HOH A 55 355 84 HOH HOH . F 6 HOH A 56 356 14 HOH HOH . F 6 HOH A 57 357 62 HOH HOH . F 6 HOH A 58 358 16 HOH HOH . F 6 HOH A 59 359 132 HOH HOH . F 6 HOH A 60 360 25 HOH HOH . F 6 HOH A 61 361 106 HOH HOH . F 6 HOH A 62 362 134 HOH HOH . F 6 HOH A 63 363 23 HOH HOH . F 6 HOH A 64 364 6 HOH HOH . F 6 HOH A 65 365 125 HOH HOH . F 6 HOH A 66 366 53 HOH HOH . F 6 HOH A 67 367 122 HOH HOH . F 6 HOH A 68 368 80 HOH HOH . F 6 HOH A 69 369 108 HOH HOH . F 6 HOH A 70 370 31 HOH HOH . F 6 HOH A 71 371 171 HOH HOH . F 6 HOH A 72 372 55 HOH HOH . F 6 HOH A 73 373 174 HOH HOH . F 6 HOH A 74 374 41 HOH HOH . F 6 HOH A 75 375 3 HOH HOH . F 6 HOH A 76 376 202 HOH HOH . F 6 HOH A 77 377 46 HOH HOH . F 6 HOH A 78 378 68 HOH HOH . F 6 HOH A 79 379 157 HOH HOH . F 6 HOH A 80 380 29 HOH HOH . F 6 HOH A 81 381 145 HOH HOH . F 6 HOH A 82 382 18 HOH HOH . F 6 HOH A 83 383 191 HOH HOH . F 6 HOH A 84 384 193 HOH HOH . F 6 HOH A 85 385 75 HOH HOH . F 6 HOH A 86 386 72 HOH HOH . F 6 HOH A 87 387 143 HOH HOH . F 6 HOH A 88 388 133 HOH HOH . F 6 HOH A 89 389 61 HOH HOH . F 6 HOH A 90 390 103 HOH HOH . F 6 HOH A 91 391 50 HOH HOH . F 6 HOH A 92 392 190 HOH HOH . F 6 HOH A 93 393 86 HOH HOH . F 6 HOH A 94 394 204 HOH HOH . F 6 HOH A 95 395 98 HOH HOH . F 6 HOH A 96 396 183 HOH HOH . F 6 HOH A 97 397 1 HOH HOH . F 6 HOH A 98 398 162 HOH HOH . F 6 HOH A 99 399 172 HOH HOH . F 6 HOH A 100 400 37 HOH HOH . F 6 HOH A 101 401 22 HOH HOH . F 6 HOH A 102 402 95 HOH HOH . F 6 HOH A 103 403 76 HOH HOH . F 6 HOH A 104 404 115 HOH HOH . F 6 HOH A 105 405 176 HOH HOH . F 6 HOH A 106 406 45 HOH HOH . F 6 HOH A 107 407 140 HOH HOH . F 6 HOH A 108 408 112 HOH HOH . F 6 HOH A 109 409 48 HOH HOH . F 6 HOH A 110 410 27 HOH HOH . F 6 HOH A 111 411 123 HOH HOH . F 6 HOH A 112 412 200 HOH HOH . F 6 HOH A 113 413 186 HOH HOH . F 6 HOH A 114 414 149 HOH HOH . F 6 HOH A 115 415 131 HOH HOH . F 6 HOH A 116 416 69 HOH HOH . F 6 HOH A 117 417 177 HOH HOH . F 6 HOH A 118 418 36 HOH HOH . F 6 HOH A 119 419 102 HOH HOH . F 6 HOH A 120 420 30 HOH HOH . F 6 HOH A 121 421 19 HOH HOH . F 6 HOH A 122 422 10 HOH HOH . F 6 HOH A 123 423 9 HOH HOH . F 6 HOH A 124 424 99 HOH HOH . F 6 HOH A 125 425 188 HOH HOH . F 6 HOH A 126 426 173 HOH HOH . F 6 HOH A 127 427 21 HOH HOH . F 6 HOH A 128 428 192 HOH HOH . F 6 HOH A 129 429 38 HOH HOH . F 6 HOH A 130 430 13 HOH HOH . F 6 HOH A 131 431 40 HOH HOH . F 6 HOH A 132 432 34 HOH HOH . F 6 HOH A 133 433 65 HOH HOH . F 6 HOH A 134 434 8 HOH HOH . F 6 HOH A 135 435 73 HOH HOH . F 6 HOH A 136 436 87 HOH HOH . F 6 HOH A 137 437 197 HOH HOH . F 6 HOH A 138 438 205 HOH HOH . F 6 HOH A 139 439 90 HOH HOH . F 6 HOH A 140 440 89 HOH HOH . F 6 HOH A 141 441 96 HOH HOH . F 6 HOH A 142 442 129 HOH HOH . F 6 HOH A 143 443 105 HOH HOH . F 6 HOH A 144 444 97 HOH HOH . F 6 HOH A 145 445 154 HOH HOH . F 6 HOH A 146 446 158 HOH HOH . F 6 HOH A 147 447 130 HOH HOH . F 6 HOH A 148 448 20 HOH HOH . F 6 HOH A 149 449 94 HOH HOH . F 6 HOH A 150 450 199 HOH HOH . F 6 HOH A 151 451 175 HOH HOH . F 6 HOH A 152 452 201 HOH HOH . F 6 HOH A 153 453 42 HOH HOH . F 6 HOH A 154 454 169 HOH HOH . F 6 HOH A 155 455 167 HOH HOH . F 6 HOH A 156 456 119 HOH HOH . F 6 HOH A 157 457 189 HOH HOH . F 6 HOH A 158 458 146 HOH HOH . F 6 HOH A 159 459 127 HOH HOH . F 6 HOH A 160 460 85 HOH HOH . F 6 HOH A 161 461 66 HOH HOH . F 6 HOH A 162 462 114 HOH HOH . F 6 HOH A 163 463 151 HOH HOH . F 6 HOH A 164 464 49 HOH HOH . F 6 HOH A 165 465 58 HOH HOH . F 6 HOH A 166 466 184 HOH HOH . F 6 HOH A 167 467 110 HOH HOH . F 6 HOH A 168 468 126 HOH HOH . F 6 HOH A 169 469 52 HOH HOH . F 6 HOH A 170 470 137 HOH HOH . F 6 HOH A 171 471 144 HOH HOH . F 6 HOH A 172 472 138 HOH HOH . F 6 HOH A 173 473 107 HOH HOH . F 6 HOH A 174 474 93 HOH HOH . F 6 HOH A 175 475 104 HOH HOH . F 6 HOH A 176 476 163 HOH HOH . F 6 HOH A 177 477 139 HOH HOH . F 6 HOH A 178 478 196 HOH HOH . F 6 HOH A 179 479 44 HOH HOH . F 6 HOH A 180 480 82 HOH HOH . F 6 HOH A 181 481 33 HOH HOH . F 6 HOH A 182 482 54 HOH HOH . F 6 HOH A 183 483 150 HOH HOH . F 6 HOH A 184 484 83 HOH HOH . F 6 HOH A 185 485 43 HOH HOH . F 6 HOH A 186 486 124 HOH HOH . F 6 HOH A 187 487 116 HOH HOH . F 6 HOH A 188 488 165 HOH HOH . F 6 HOH A 189 489 170 HOH HOH . F 6 HOH A 190 490 121 HOH HOH . F 6 HOH A 191 491 35 HOH HOH . F 6 HOH A 192 492 47 HOH HOH . F 6 HOH A 193 493 92 HOH HOH . F 6 HOH A 194 494 28 HOH HOH . F 6 HOH A 195 495 51 HOH HOH . F 6 HOH A 196 496 56 HOH HOH . F 6 HOH A 197 497 148 HOH HOH . F 6 HOH A 198 498 59 HOH HOH . F 6 HOH A 199 499 32 HOH HOH . F 6 HOH A 200 500 195 HOH HOH . F 6 HOH A 201 501 141 HOH HOH . F 6 HOH A 202 502 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 -8.689 4.572 -27.303 1 31.68 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 4 -9.898 4.246 -26.606 1 37.25 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 4 -8.302 6.009 -26.981 1 37.85 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 4 -8.025 6.135 -25.583 1 42.15 ? O2 EDO 203 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #