data_7TJ5 # _model_server_result.job_id MFTtG_NeIAd99RFqVGxvvQ _model_server_result.datetime_utc '2024-10-15 11:28:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tj5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 7TJ5 # _exptl.entry_id 7TJ5 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 329.206 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TJ5 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TJ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 O N N ? 2 W N N ? 2 EA N N # _chem_comp.formula 'C10 H12 N5 O6 P' _chem_comp.formula_weight 329.206 _chem_comp.id CMP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'CYCLIC AMP;CAMP' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P CMP doub 70 n n P O2P CMP sing 71 n n P O5' CMP sing 72 n n P O3' CMP sing 73 n n O2P HOP2 CMP sing 74 n n O5' C5' CMP sing 75 n n C5' C4' CMP sing 76 n n C5' "H5'1" CMP sing 77 n n C5' "H5'2" CMP sing 78 n n C4' O4' CMP sing 79 n n C4' C3' CMP sing 80 n n C4' H4' CMP sing 81 n n O4' C1' CMP sing 82 n n C3' O3' CMP sing 83 n n C3' C2' CMP sing 84 n n C3' H3' CMP sing 85 n n C2' O2' CMP sing 86 n n C2' C1' CMP sing 87 n n C2' H2' CMP sing 88 n n O2' HO2' CMP sing 89 n n C1' N9 CMP sing 90 n n C1' H1' CMP sing 91 n n N9 C8 CMP sing 92 n y N9 C4 CMP sing 93 n y C8 N7 CMP doub 94 n y C8 H8 CMP sing 95 n n N7 C5 CMP sing 96 n y C5 C6 CMP sing 97 n y C5 C4 CMP doub 98 n y C6 N6 CMP sing 99 n n C6 N1 CMP doub 100 n y N6 HN61 CMP sing 101 n n N6 HN62 CMP sing 102 n n N1 C2 CMP sing 103 n y C2 N3 CMP doub 104 n y C2 H2 CMP sing 105 n n N3 C4 CMP sing 106 n y # _atom_sites.entry_id 7TJ5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CMP A 1 501 501 CMP CMP . F 3 D21 A 1 502 603 D21 LIG . G 3 D21 A 1 503 604 D21 LIG . H 3 D21 A 1 504 605 D21 LIG . I 3 D21 A 1 505 606 D21 LIG . J 3 D21 A 1 506 607 D21 LIG . K 3 D21 A 1 507 601 D21 LIG . L 3 D21 A 1 508 602 D21 LIG . M 3 D21 B 1 601 601 D21 LIG . N 3 D21 B 1 602 602 D21 LIG . O 2 CMP B 1 603 501 CMP CMP . P 3 D21 B 1 604 603 D21 LIG . Q 3 D21 B 1 605 604 D21 LIG . R 3 D21 B 1 606 605 D21 LIG . S 3 D21 B 1 607 606 D21 LIG . T 3 D21 B 1 608 607 D21 LIG . U 3 D21 C 1 601 601 D21 LIG . V 3 D21 C 1 602 602 D21 LIG . W 2 CMP C 1 603 501 CMP CMP . X 3 D21 C 1 604 603 D21 LIG . Y 3 D21 C 1 605 604 D21 LIG . Z 3 D21 C 1 606 605 D21 LIG . AA 3 D21 C 1 607 606 D21 LIG . BA 3 D21 C 1 608 607 D21 LIG . CA 3 D21 D 1 601 601 D21 LIG . DA 3 D21 D 1 602 602 D21 LIG . EA 2 CMP D 1 603 501 CMP CMP . FA 3 D21 D 1 604 603 D21 LIG . GA 3 D21 D 1 605 604 D21 LIG . HA 3 D21 D 1 606 605 D21 LIG . IA 3 D21 D 1 607 606 D21 LIG . JA 3 D21 D 1 608 607 D21 LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P CMP . . . E 2 119.152 155.663 95.061 1 22.25 ? P CMP 501 A 1 HETATM 2 O O1P CMP . . . E 2 119.448 155.213 93.65 1 22.25 ? O1P CMP 501 A 1 HETATM 3 O O2P CMP . . . E 2 119.54 154.781 96.226 1 22.25 ? O2P CMP 501 A 1 HETATM 4 O O5' CMP . . . E 2 119.888 157.065 95.308 1 22.25 ? O5' CMP 501 A 1 HETATM 5 C C5' CMP . . . E 2 119.677 157.788 96.517 1 22.25 ? C5' CMP 501 A 1 HETATM 6 C C4' CMP . . . E 2 118.265 157.552 96.964 1 22.25 ? C4' CMP 501 A 1 HETATM 7 O O4' CMP . . . E 2 117.675 158.695 97.619 1 22.25 ? O4' CMP 501 A 1 HETATM 8 C C3' CMP . . . E 2 117.322 157.297 95.82 1 22.25 ? C3' CMP 501 A 1 HETATM 9 O O3' CMP . . . E 2 117.579 156.054 95.192 1 22.25 ? O3' CMP 501 A 1 HETATM 10 C C2' CMP . . . E 2 115.965 157.476 96.484 1 22.25 ? C2' CMP 501 A 1 HETATM 11 O O2' CMP . . . E 2 115.624 156.332 97.252 1 22.25 ? O2' CMP 501 A 1 HETATM 12 C C1' CMP . . . E 2 116.268 158.639 97.448 1 22.25 ? C1' CMP 501 A 1 HETATM 13 N N9 CMP . . . E 2 115.801 159.938 96.93 1 22.25 ? N9 CMP 501 A 1 HETATM 14 C C8 CMP . . . E 2 116.335 160.621 95.898 1 22.25 ? C8 CMP 501 A 1 HETATM 15 N N7 CMP . . . E 2 115.67 161.783 95.679 1 22.25 ? N7 CMP 501 A 1 HETATM 16 C C5 CMP . . . E 2 114.684 161.859 96.59 1 22.25 ? C5 CMP 501 A 1 HETATM 17 C C6 CMP . . . E 2 113.61 162.825 96.921 1 22.25 ? C6 CMP 501 A 1 HETATM 18 N N6 CMP . . . E 2 113.456 163.97 96.214 1 22.25 ? N6 CMP 501 A 1 HETATM 19 N N1 CMP . . . E 2 112.79 162.524 97.953 1 22.25 ? N1 CMP 501 A 1 HETATM 20 C C2 CMP . . . E 2 112.933 161.39 98.663 1 22.25 ? C2 CMP 501 A 1 HETATM 21 N N3 CMP . . . E 2 113.883 160.471 98.418 1 22.25 ? N3 CMP 501 A 1 HETATM 22 C C4 CMP . . . E 2 114.775 160.643 97.413 1 22.25 ? C4 CMP 501 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 22 #