data_7TJC # _model_server_result.job_id 5Vj7WbClUqTlYohAY7f-7Q _model_server_result.datetime_utc '2024-11-04 23:59:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tjc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 7TJC # _exptl.entry_id 7TJC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TJC _cell.length_a 43.219 _cell.length_b 66.553 _cell.length_c 93.165 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TJC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.063 ? disulf ? disulf2 A SG CYS 22 A CYS 22 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.013 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 161 n n C1 C2 GOL sing 162 n n C1 H11 GOL sing 163 n n C1 H12 GOL sing 164 n n O1 HO1 GOL sing 165 n n C2 O2 GOL sing 166 n n C2 C3 GOL sing 167 n n C2 H2 GOL sing 168 n n O2 HO2 GOL sing 169 n n C3 O3 GOL sing 170 n n C3 H31 GOL sing 171 n n C3 H32 GOL sing 172 n n O3 HO3 GOL sing 173 n n # _atom_sites.entry_id 7TJC _atom_sites.fract_transf_matrix[1][1] 0.023138 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015026 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010734 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CLM A 1 201 125 CLM CLM . D 3 GOL A 1 202 126 GOL GOL . E 2 CLM B 1 201 125 CLM CLM . F 4 HOH A 1 301 235 HOH HOH . F 4 HOH A 2 302 191 HOH HOH . F 4 HOH A 3 303 203 HOH HOH . F 4 HOH A 4 304 174 HOH HOH . F 4 HOH A 5 305 227 HOH HOH . F 4 HOH A 6 306 146 HOH HOH . F 4 HOH A 7 307 162 HOH HOH . F 4 HOH A 8 308 210 HOH HOH . F 4 HOH A 9 309 132 HOH HOH . F 4 HOH A 10 310 148 HOH HOH . F 4 HOH A 11 311 149 HOH HOH . F 4 HOH A 12 312 214 HOH HOH . F 4 HOH A 13 313 166 HOH HOH . F 4 HOH A 14 314 184 HOH HOH . F 4 HOH A 15 315 133 HOH HOH . F 4 HOH A 16 316 126 HOH HOH . F 4 HOH A 17 317 164 HOH HOH . F 4 HOH A 18 318 131 HOH HOH . F 4 HOH A 19 319 129 HOH HOH . F 4 HOH A 20 320 173 HOH HOH . F 4 HOH A 21 321 161 HOH HOH . F 4 HOH A 22 322 139 HOH HOH . F 4 HOH A 23 323 220 HOH HOH . F 4 HOH A 24 324 197 HOH HOH . F 4 HOH A 25 325 134 HOH HOH . F 4 HOH A 26 326 125 HOH HOH . F 4 HOH A 27 327 140 HOH HOH . F 4 HOH A 28 328 142 HOH HOH . F 4 HOH A 29 329 137 HOH HOH . F 4 HOH A 30 330 209 HOH HOH . F 4 HOH A 31 331 185 HOH HOH . F 4 HOH A 32 332 160 HOH HOH . F 4 HOH A 33 333 223 HOH HOH . F 4 HOH A 34 334 157 HOH HOH . F 4 HOH A 35 335 232 HOH HOH . F 4 HOH A 36 336 143 HOH HOH . F 4 HOH A 37 337 216 HOH HOH . F 4 HOH A 38 338 196 HOH HOH . F 4 HOH A 39 339 245 HOH HOH . F 4 HOH A 40 340 200 HOH HOH . F 4 HOH A 41 341 141 HOH HOH . F 4 HOH A 42 342 218 HOH HOH . F 4 HOH A 43 343 172 HOH HOH . F 4 HOH A 44 344 151 HOH HOH . F 4 HOH A 45 345 247 HOH HOH . F 4 HOH A 46 346 188 HOH HOH . F 4 HOH A 47 347 128 HOH HOH . F 4 HOH A 48 348 217 HOH HOH . F 4 HOH A 49 349 169 HOH HOH . F 4 HOH A 50 350 153 HOH HOH . F 4 HOH A 51 351 211 HOH HOH . F 4 HOH A 52 352 156 HOH HOH . F 4 HOH A 53 353 202 HOH HOH . F 4 HOH A 54 354 186 HOH HOH . F 4 HOH A 55 355 180 HOH HOH . F 4 HOH A 56 356 233 HOH HOH . F 4 HOH A 57 357 171 HOH HOH . F 4 HOH A 58 358 236 HOH HOH . F 4 HOH A 59 359 206 HOH HOH . F 4 HOH A 60 360 178 HOH HOH . F 4 HOH A 61 361 237 HOH HOH . F 4 HOH A 62 362 208 HOH HOH . F 4 HOH A 63 363 134 HOH HOH . F 4 HOH A 64 364 144 HOH HOH . F 4 HOH A 65 365 181 HOH HOH . F 4 HOH A 66 366 155 HOH HOH . F 4 HOH A 67 367 221 HOH HOH . F 4 HOH A 68 368 240 HOH HOH . F 4 HOH A 69 369 159 HOH HOH . F 4 HOH A 70 370 183 HOH HOH . F 4 HOH A 71 371 192 HOH HOH . F 4 HOH A 72 372 165 HOH HOH . F 4 HOH A 73 373 175 HOH HOH . F 4 HOH A 74 374 127 HOH HOH . F 4 HOH A 75 375 193 HOH HOH . F 4 HOH A 76 376 145 HOH HOH . F 4 HOH A 77 377 136 HOH HOH . F 4 HOH A 78 378 224 HOH HOH . F 4 HOH A 79 379 170 HOH HOH . F 4 HOH A 80 380 199 HOH HOH . F 4 HOH A 81 381 182 HOH HOH . F 4 HOH A 82 382 201 HOH HOH . F 4 HOH A 83 383 150 HOH HOH . F 4 HOH A 84 384 154 HOH HOH . F 4 HOH A 85 385 163 HOH HOH . F 4 HOH A 86 386 213 HOH HOH . F 4 HOH A 87 387 130 HOH HOH . F 4 HOH A 88 388 168 HOH HOH . F 4 HOH A 89 389 152 HOH HOH . F 4 HOH A 90 390 215 HOH HOH . F 4 HOH A 91 391 207 HOH HOH . F 4 HOH A 92 392 241 HOH HOH . F 4 HOH A 93 393 226 HOH HOH . F 4 HOH A 94 394 189 HOH HOH . F 4 HOH A 95 395 176 HOH HOH . F 4 HOH A 96 396 239 HOH HOH . F 4 HOH A 97 397 238 HOH HOH . F 4 HOH A 98 398 229 HOH HOH . F 4 HOH A 99 399 212 HOH HOH . F 4 HOH A 100 400 234 HOH HOH . F 4 HOH A 101 401 225 HOH HOH . F 4 HOH A 102 402 204 HOH HOH . F 4 HOH A 103 403 167 HOH HOH . F 4 HOH A 104 404 195 HOH HOH . F 4 HOH A 105 405 187 HOH HOH . F 4 HOH A 106 406 190 HOH HOH . F 4 HOH A 107 407 228 HOH HOH . F 4 HOH A 108 408 231 HOH HOH . F 4 HOH A 109 409 246 HOH HOH . F 4 HOH A 110 410 244 HOH HOH . F 4 HOH A 111 411 194 HOH HOH . F 4 HOH A 112 412 242 HOH HOH . F 4 HOH A 113 413 179 HOH HOH . F 4 HOH A 114 414 222 HOH HOH . F 4 HOH A 115 415 219 HOH HOH . F 4 HOH A 116 416 147 HOH HOH . F 4 HOH A 117 417 158 HOH HOH . F 4 HOH A 118 418 138 HOH HOH . F 4 HOH A 119 419 175 HOH HOH . F 4 HOH A 120 420 198 HOH HOH . F 4 HOH A 121 421 249 HOH HOH . F 4 HOH A 122 422 230 HOH HOH . F 4 HOH A 123 423 238 HOH HOH . F 4 HOH A 124 424 243 HOH HOH . F 4 HOH A 125 425 205 HOH HOH . G 4 HOH B 1 301 186 HOH HOH . G 4 HOH B 2 302 165 HOH HOH . G 4 HOH B 3 303 252 HOH HOH . G 4 HOH B 4 304 240 HOH HOH . G 4 HOH B 5 305 258 HOH HOH . G 4 HOH B 6 306 169 HOH HOH . G 4 HOH B 7 307 257 HOH HOH . G 4 HOH B 8 308 138 HOH HOH . G 4 HOH B 9 309 151 HOH HOH . G 4 HOH B 10 310 147 HOH HOH . G 4 HOH B 11 311 140 HOH HOH . G 4 HOH B 12 312 161 HOH HOH . G 4 HOH B 13 313 209 HOH HOH . G 4 HOH B 14 314 153 HOH HOH . G 4 HOH B 15 315 189 HOH HOH . G 4 HOH B 16 316 164 HOH HOH . G 4 HOH B 17 317 144 HOH HOH . G 4 HOH B 18 318 197 HOH HOH . G 4 HOH B 19 319 174 HOH HOH . G 4 HOH B 20 320 128 HOH HOH . G 4 HOH B 21 321 190 HOH HOH . G 4 HOH B 22 322 221 HOH HOH . G 4 HOH B 23 323 127 HOH HOH . G 4 HOH B 24 324 162 HOH HOH . G 4 HOH B 25 325 195 HOH HOH . G 4 HOH B 26 326 149 HOH HOH . G 4 HOH B 27 327 133 HOH HOH . G 4 HOH B 28 328 179 HOH HOH . G 4 HOH B 29 329 160 HOH HOH . G 4 HOH B 30 330 142 HOH HOH . G 4 HOH B 31 331 135 HOH HOH . G 4 HOH B 32 332 130 HOH HOH . G 4 HOH B 33 333 125 HOH HOH . G 4 HOH B 34 334 187 HOH HOH . G 4 HOH B 35 335 182 HOH HOH . G 4 HOH B 36 336 236 HOH HOH . G 4 HOH B 37 337 129 HOH HOH . G 4 HOH B 38 338 196 HOH HOH . G 4 HOH B 39 339 166 HOH HOH . G 4 HOH B 40 340 143 HOH HOH . G 4 HOH B 41 341 141 HOH HOH . G 4 HOH B 42 342 198 HOH HOH . G 4 HOH B 43 343 163 HOH HOH . G 4 HOH B 44 344 146 HOH HOH . G 4 HOH B 45 345 173 HOH HOH . G 4 HOH B 46 346 168 HOH HOH . G 4 HOH B 47 347 159 HOH HOH . G 4 HOH B 48 348 170 HOH HOH . G 4 HOH B 49 349 137 HOH HOH . G 4 HOH B 50 350 235 HOH HOH . G 4 HOH B 51 351 244 HOH HOH . G 4 HOH B 52 352 247 HOH HOH . G 4 HOH B 53 353 193 HOH HOH . G 4 HOH B 54 354 132 HOH HOH . G 4 HOH B 55 355 204 HOH HOH . G 4 HOH B 56 356 152 HOH HOH . G 4 HOH B 57 357 210 HOH HOH . G 4 HOH B 58 358 242 HOH HOH . G 4 HOH B 59 359 145 HOH HOH . G 4 HOH B 60 360 213 HOH HOH . G 4 HOH B 61 361 135 HOH HOH . G 4 HOH B 62 362 131 HOH HOH . G 4 HOH B 63 363 220 HOH HOH . G 4 HOH B 64 364 206 HOH HOH . G 4 HOH B 65 365 208 HOH HOH . G 4 HOH B 66 366 184 HOH HOH . G 4 HOH B 67 367 178 HOH HOH . G 4 HOH B 68 368 234 HOH HOH . G 4 HOH B 69 369 216 HOH HOH . G 4 HOH B 70 370 183 HOH HOH . G 4 HOH B 71 371 219 HOH HOH . G 4 HOH B 72 372 223 HOH HOH . G 4 HOH B 73 373 156 HOH HOH . G 4 HOH B 74 374 218 HOH HOH . G 4 HOH B 75 375 136 HOH HOH . G 4 HOH B 76 376 154 HOH HOH . G 4 HOH B 77 377 181 HOH HOH . G 4 HOH B 78 378 225 HOH HOH . G 4 HOH B 79 379 126 HOH HOH . G 4 HOH B 80 380 157 HOH HOH . G 4 HOH B 81 381 194 HOH HOH . G 4 HOH B 82 382 185 HOH HOH . G 4 HOH B 83 383 172 HOH HOH . G 4 HOH B 84 384 200 HOH HOH . G 4 HOH B 85 385 158 HOH HOH . G 4 HOH B 86 386 229 HOH HOH . G 4 HOH B 87 387 155 HOH HOH . G 4 HOH B 88 388 251 HOH HOH . G 4 HOH B 89 389 148 HOH HOH . G 4 HOH B 90 390 177 HOH HOH . G 4 HOH B 91 391 250 HOH HOH . G 4 HOH B 92 392 167 HOH HOH . G 4 HOH B 93 393 239 HOH HOH . G 4 HOH B 94 394 180 HOH HOH . G 4 HOH B 95 395 243 HOH HOH . G 4 HOH B 96 396 224 HOH HOH . G 4 HOH B 97 397 207 HOH HOH . G 4 HOH B 98 398 205 HOH HOH . G 4 HOH B 99 399 232 HOH HOH . G 4 HOH B 100 400 150 HOH HOH . G 4 HOH B 101 401 222 HOH HOH . G 4 HOH B 102 402 260 HOH HOH . G 4 HOH B 103 403 231 HOH HOH . G 4 HOH B 104 404 237 HOH HOH . G 4 HOH B 105 405 253 HOH HOH . G 4 HOH B 106 406 176 HOH HOH . G 4 HOH B 107 407 249 HOH HOH . G 4 HOH B 108 408 254 HOH HOH . G 4 HOH B 109 409 256 HOH HOH . G 4 HOH B 110 410 211 HOH HOH . G 4 HOH B 111 411 248 HOH HOH . G 4 HOH B 112 412 199 HOH HOH . G 4 HOH B 113 413 246 HOH HOH . G 4 HOH B 114 414 192 HOH HOH . G 4 HOH B 115 415 228 HOH HOH . G 4 HOH B 116 416 248 HOH HOH . G 4 HOH B 117 417 203 HOH HOH . G 4 HOH B 118 418 245 HOH HOH . G 4 HOH B 119 419 226 HOH HOH . G 4 HOH B 120 420 139 HOH HOH . G 4 HOH B 121 421 191 HOH HOH . G 4 HOH B 122 422 171 HOH HOH . G 4 HOH B 123 423 255 HOH HOH . G 4 HOH B 124 424 233 HOH HOH . G 4 HOH B 125 425 217 HOH HOH . G 4 HOH B 126 426 177 HOH HOH . G 4 HOH B 127 427 241 HOH HOH . G 4 HOH B 128 428 188 HOH HOH . G 4 HOH B 129 429 259 HOH HOH . G 4 HOH B 130 430 227 HOH HOH . G 4 HOH B 131 431 230 HOH HOH . G 4 HOH B 132 432 212 HOH HOH . G 4 HOH B 133 433 202 HOH HOH . G 4 HOH B 134 434 214 HOH HOH . G 4 HOH B 135 435 201 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 31.636 22.339 45.237 1 27.97 ? C1 GOL 202 A 1 HETATM 2 O O1 GOL . . . D 3 30.602 22.201 46.158 1 29.54 ? O1 GOL 202 A 1 HETATM 3 C C2 GOL . . . D 3 31.077 21.841 43.899 1 28.52 ? C2 GOL 202 A 1 HETATM 4 O O2 GOL . . . D 3 30.362 22.84 43.242 1 28.04 ? O2 GOL 202 A 1 HETATM 5 C C3 GOL . . . D 3 32.296 21.312 43.093 1 28.86 ? C3 GOL 202 A 1 HETATM 6 O O3 GOL . . . D 3 31.846 21.083 41.79 1 28.34 ? O3 GOL 202 A 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #