data_7TKW # _model_server_result.job_id MGS3zJWCwkHl9M4tY0lI6g _model_server_result.datetime_utc '2024-11-27 09:25:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tkw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7TKW # _exptl.entry_id 7TKW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TKW _cell.length_a 53.75 _cell.length_b 64.95 _cell.length_c 70.41 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TKW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7TKW _atom_sites.fract_transf_matrix[1][1] 0.018605 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015396 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 201 GOL GOL . D 3 PEG A 1 202 301 PEG PEG . E 3 PEG A 1 203 401 PEG PEG . F 2 GOL A 1 204 501 GOL GOL . G 2 GOL A 1 205 601 GOL GOL . H 2 GOL B 1 201 201 GOL GOL . I 4 HOH A 1 301 360 HOH HOH . I 4 HOH A 2 302 206 HOH HOH . I 4 HOH A 3 303 109 HOH HOH . I 4 HOH A 4 304 383 HOH HOH . I 4 HOH A 5 305 38 HOH HOH . I 4 HOH A 6 306 132 HOH HOH . I 4 HOH A 7 307 191 HOH HOH . I 4 HOH A 8 308 72 HOH HOH . I 4 HOH A 9 309 31 HOH HOH . I 4 HOH A 10 310 91 HOH HOH . I 4 HOH A 11 311 119 HOH HOH . I 4 HOH A 12 312 24 HOH HOH . I 4 HOH A 13 313 131 HOH HOH . I 4 HOH A 14 314 23 HOH HOH . I 4 HOH A 15 315 49 HOH HOH . I 4 HOH A 16 316 336 HOH HOH . I 4 HOH A 17 317 1 HOH HOH . I 4 HOH A 18 318 362 HOH HOH . I 4 HOH A 19 319 97 HOH HOH . I 4 HOH A 20 320 239 HOH HOH . I 4 HOH A 21 321 76 HOH HOH . I 4 HOH A 22 322 34 HOH HOH . I 4 HOH A 23 323 81 HOH HOH . I 4 HOH A 24 324 335 HOH HOH . I 4 HOH A 25 325 193 HOH HOH . I 4 HOH A 26 326 16 HOH HOH . I 4 HOH A 27 327 190 HOH HOH . I 4 HOH A 28 328 195 HOH HOH . I 4 HOH A 29 329 243 HOH HOH . I 4 HOH A 30 330 161 HOH HOH . I 4 HOH A 31 331 246 HOH HOH . I 4 HOH A 32 332 257 HOH HOH . I 4 HOH A 33 333 213 HOH HOH . I 4 HOH A 34 334 12 HOH HOH . I 4 HOH A 35 335 17 HOH HOH . I 4 HOH A 36 336 35 HOH HOH . I 4 HOH A 37 337 92 HOH HOH . I 4 HOH A 38 338 7 HOH HOH . I 4 HOH A 39 339 45 HOH HOH . I 4 HOH A 40 340 22 HOH HOH . I 4 HOH A 41 341 27 HOH HOH . I 4 HOH A 42 342 86 HOH HOH . I 4 HOH A 43 343 258 HOH HOH . I 4 HOH A 44 344 8 HOH HOH . I 4 HOH A 45 345 128 HOH HOH . I 4 HOH A 46 346 10 HOH HOH . I 4 HOH A 47 347 5 HOH HOH . I 4 HOH A 48 348 307 HOH HOH . I 4 HOH A 49 349 160 HOH HOH . I 4 HOH A 50 350 210 HOH HOH . I 4 HOH A 51 351 168 HOH HOH . I 4 HOH A 52 352 116 HOH HOH . I 4 HOH A 53 353 64 HOH HOH . I 4 HOH A 54 354 225 HOH HOH . I 4 HOH A 55 355 337 HOH HOH . I 4 HOH A 56 356 71 HOH HOH . I 4 HOH A 57 357 103 HOH HOH . I 4 HOH A 58 358 114 HOH HOH . I 4 HOH A 59 359 221 HOH HOH . I 4 HOH A 60 360 54 HOH HOH . I 4 HOH A 61 361 33 HOH HOH . I 4 HOH A 62 362 26 HOH HOH . I 4 HOH A 63 363 122 HOH HOH . I 4 HOH A 64 364 110 HOH HOH . I 4 HOH A 65 365 20 HOH HOH . I 4 HOH A 66 366 9 HOH HOH . I 4 HOH A 67 367 185 HOH HOH . I 4 HOH A 68 368 177 HOH HOH . I 4 HOH A 69 369 90 HOH HOH . I 4 HOH A 70 370 247 HOH HOH . I 4 HOH A 71 371 39 HOH HOH . I 4 HOH A 72 372 154 HOH HOH . I 4 HOH A 73 373 108 HOH HOH . I 4 HOH A 74 374 87 HOH HOH . I 4 HOH A 75 375 350 HOH HOH . I 4 HOH A 76 376 328 HOH HOH . I 4 HOH A 77 377 237 HOH HOH . I 4 HOH A 78 378 32 HOH HOH . I 4 HOH A 79 379 349 HOH HOH . I 4 HOH A 80 380 13 HOH HOH . I 4 HOH A 81 381 381 HOH HOH . I 4 HOH A 82 382 100 HOH HOH . I 4 HOH A 83 383 3 HOH HOH . I 4 HOH A 84 384 37 HOH HOH . I 4 HOH A 85 385 61 HOH HOH . I 4 HOH A 86 386 196 HOH HOH . I 4 HOH A 87 387 11 HOH HOH . I 4 HOH A 88 388 217 HOH HOH . I 4 HOH A 89 389 57 HOH HOH . I 4 HOH A 90 390 272 HOH HOH . I 4 HOH A 91 391 380 HOH HOH . I 4 HOH A 92 392 215 HOH HOH . I 4 HOH A 93 393 211 HOH HOH . I 4 HOH A 94 394 194 HOH HOH . I 4 HOH A 95 395 82 HOH HOH . I 4 HOH A 96 396 373 HOH HOH . I 4 HOH A 97 397 379 HOH HOH . I 4 HOH A 98 398 170 HOH HOH . I 4 HOH A 99 399 228 HOH HOH . I 4 HOH A 100 400 187 HOH HOH . I 4 HOH A 101 401 147 HOH HOH . I 4 HOH A 102 402 240 HOH HOH . I 4 HOH A 103 403 339 HOH HOH . I 4 HOH A 104 404 277 HOH HOH . I 4 HOH A 105 405 244 HOH HOH . I 4 HOH A 106 406 138 HOH HOH . I 4 HOH A 107 407 357 HOH HOH . I 4 HOH A 108 408 303 HOH HOH . I 4 HOH A 109 409 286 HOH HOH . I 4 HOH A 110 410 245 HOH HOH . I 4 HOH A 111 411 372 HOH HOH . I 4 HOH A 112 412 79 HOH HOH . I 4 HOH A 113 413 126 HOH HOH . I 4 HOH A 114 414 56 HOH HOH . I 4 HOH A 115 415 276 HOH HOH . I 4 HOH A 116 416 363 HOH HOH . I 4 HOH A 117 417 345 HOH HOH . I 4 HOH A 118 418 118 HOH HOH . I 4 HOH A 119 419 150 HOH HOH . I 4 HOH A 120 420 47 HOH HOH . I 4 HOH A 121 421 141 HOH HOH . I 4 HOH A 122 422 104 HOH HOH . I 4 HOH A 123 423 75 HOH HOH . I 4 HOH A 124 424 268 HOH HOH . I 4 HOH A 125 425 263 HOH HOH . I 4 HOH A 126 426 151 HOH HOH . I 4 HOH A 127 427 105 HOH HOH . I 4 HOH A 128 428 58 HOH HOH . I 4 HOH A 129 429 304 HOH HOH . I 4 HOH A 130 430 378 HOH HOH . J 4 HOH B 1 301 365 HOH HOH . J 4 HOH B 2 302 382 HOH HOH . J 4 HOH B 3 303 139 HOH HOH . J 4 HOH B 4 304 279 HOH HOH . J 4 HOH B 5 305 44 HOH HOH . J 4 HOH B 6 306 30 HOH HOH . J 4 HOH B 7 307 136 HOH HOH . J 4 HOH B 8 308 219 HOH HOH . J 4 HOH B 9 309 53 HOH HOH . J 4 HOH B 10 310 94 HOH HOH . J 4 HOH B 11 311 287 HOH HOH . J 4 HOH B 12 312 164 HOH HOH . J 4 HOH B 13 313 230 HOH HOH . J 4 HOH B 14 314 259 HOH HOH . J 4 HOH B 15 315 171 HOH HOH . J 4 HOH B 16 316 242 HOH HOH . J 4 HOH B 17 317 153 HOH HOH . J 4 HOH B 18 318 233 HOH HOH . J 4 HOH B 19 319 95 HOH HOH . J 4 HOH B 20 320 176 HOH HOH . J 4 HOH B 21 321 6 HOH HOH . J 4 HOH B 22 322 273 HOH HOH . J 4 HOH B 23 323 340 HOH HOH . J 4 HOH B 24 324 159 HOH HOH . J 4 HOH B 25 325 229 HOH HOH . J 4 HOH B 26 326 99 HOH HOH . J 4 HOH B 27 327 140 HOH HOH . J 4 HOH B 28 328 173 HOH HOH . J 4 HOH B 29 329 155 HOH HOH . J 4 HOH B 30 330 222 HOH HOH . J 4 HOH B 31 331 21 HOH HOH . J 4 HOH B 32 332 123 HOH HOH . J 4 HOH B 33 333 180 HOH HOH . J 4 HOH B 34 334 68 HOH HOH . J 4 HOH B 35 335 15 HOH HOH . J 4 HOH B 36 336 296 HOH HOH . J 4 HOH B 37 337 227 HOH HOH . J 4 HOH B 38 338 261 HOH HOH . J 4 HOH B 39 339 235 HOH HOH . J 4 HOH B 40 340 113 HOH HOH . J 4 HOH B 41 341 19 HOH HOH . J 4 HOH B 42 342 65 HOH HOH . J 4 HOH B 43 343 41 HOH HOH . J 4 HOH B 44 344 43 HOH HOH . J 4 HOH B 45 345 181 HOH HOH . J 4 HOH B 46 346 96 HOH HOH . J 4 HOH B 47 347 55 HOH HOH . J 4 HOH B 48 348 174 HOH HOH . J 4 HOH B 49 349 40 HOH HOH . J 4 HOH B 50 350 36 HOH HOH . J 4 HOH B 51 351 101 HOH HOH . J 4 HOH B 52 352 374 HOH HOH . J 4 HOH B 53 353 364 HOH HOH . J 4 HOH B 54 354 69 HOH HOH . J 4 HOH B 55 355 77 HOH HOH . J 4 HOH B 56 356 83 HOH HOH . J 4 HOH B 57 357 184 HOH HOH . J 4 HOH B 58 358 117 HOH HOH . J 4 HOH B 59 359 51 HOH HOH . J 4 HOH B 60 360 314 HOH HOH . J 4 HOH B 61 361 146 HOH HOH . J 4 HOH B 62 362 310 HOH HOH . J 4 HOH B 63 363 252 HOH HOH . J 4 HOH B 64 364 207 HOH HOH . J 4 HOH B 65 365 134 HOH HOH . J 4 HOH B 66 366 60 HOH HOH . J 4 HOH B 67 367 121 HOH HOH . J 4 HOH B 68 368 74 HOH HOH . J 4 HOH B 69 369 375 HOH HOH . J 4 HOH B 70 370 148 HOH HOH . J 4 HOH B 71 371 28 HOH HOH . J 4 HOH B 72 372 178 HOH HOH . J 4 HOH B 73 373 368 HOH HOH . J 4 HOH B 74 374 2 HOH HOH . J 4 HOH B 75 375 48 HOH HOH . J 4 HOH B 76 376 167 HOH HOH . J 4 HOH B 77 377 321 HOH HOH . J 4 HOH B 78 378 135 HOH HOH . J 4 HOH B 79 379 322 HOH HOH . J 4 HOH B 80 380 376 HOH HOH . J 4 HOH B 81 381 250 HOH HOH . J 4 HOH B 82 382 343 HOH HOH . J 4 HOH B 83 383 347 HOH HOH . J 4 HOH B 84 384 306 HOH HOH . J 4 HOH B 85 385 179 HOH HOH . J 4 HOH B 86 386 288 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 -1.636 -7.496 10.817 1 50.67 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . C 2 -0.516 -6.826 11.388 1 68.79 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . C 2 -2.728 -6.523 10.427 1 68.59 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . C 2 -3.433 -6.084 11.586 1 50.51 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . C 2 -2.224 -5.337 9.632 1 57.36 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . C 2 -3.297 -4.515 9.181 1 60.8 ? O3 GOL 201 A 1 HETATM 7 H H11 GOL . . . C 2 -2.029 -8.086 11.469 1 60.81 ? H11 GOL 201 A 1 HETATM 8 H H12 GOL . . . C 2 -1.406 -8.085 10.133 1 60.81 ? H12 GOL 201 A 1 HETATM 9 H HO1 GOL . . . C 2 -0.049 -6.539 10.738 1 82.55 ? HO1 GOL 201 A 1 HETATM 10 H H2 GOL . . . C 2 -3.344 -6.957 9.948 1 82.31 ? H2 GOL 201 A 1 HETATM 11 H HO2 GOL . . . C 2 -4.036 -5.54 11.335 1 60.62 ? HO2 GOL 201 A 1 HETATM 12 H H31 GOL . . . C 2 -1.676 -5.587 9.004 1 68.83 ? H31 GOL 201 A 1 HETATM 13 H H32 GOL . . . C 2 -1.648 -4.823 10.219 1 68.83 ? H32 GOL 201 A 1 HETATM 14 H HO3 GOL . . . C 2 -2.947 -3.873 8.748 1 72.96 ? HO3 GOL 201 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #