data_7TMK # _model_server_result.job_id tJGXXHxfytvDzaU99lYJYw _model_server_result.datetime_utc '2024-11-28 01:33:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tmk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7TMK # _exptl.entry_id 7TMK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 41.052 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ACETONITRILE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 82.067 _cell.angle_beta 89.981 _cell.angle_gamma 88.199 _cell.entry_id 7TMK _cell.length_a 13.396 _cell.length_b 13.768 _cell.length_c 27.481 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TMK _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C02 I6W 1 A I6W 1 1_555 A N LEU 2 A LEU 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.416 ? covale ? covale2 A C02 I6W 1 A I6W 1 1_555 A N LEU 2 A LEU 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.429 ? covale ? covale3 A C LEU 2 A LEU 2 1_555 A N AIB 3 A AIB 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C AIB 3 A AIB 3 1_555 A N ALA 4 A ALA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 A C ALA 4 A ALA 4 1_555 A N AIB 5 A AIB 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 A C AIB 5 A AIB 5 1_555 A N LEU 6 A LEU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale7 A C GLN 8 A GLN 8 1_555 A N AIB 9 A AIB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale8 A C AIB 9 A AIB 9 1_555 A N LEU 10 A LEU 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale9 A C LEU 10 A LEU 10 1_555 A N15 I77 11 A I77 11 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.413 ? covale ? covale10 A C LEU 10 A LEU 10 1_555 A N15 I77 11 A I77 11 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.429 ? covale ? covale11 B C02 I6W 1 C I6W 1 1_555 B N LEU 2 C LEU 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.423 ? covale ? covale12 B C02 I6W 1 C I6W 1 1_555 B N LEU 2 C LEU 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.427 ? covale ? covale13 B C LEU 2 C LEU 2 1_555 B N AIB 3 C AIB 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale14 B C AIB 3 C AIB 3 1_555 B N ALA 4 C ALA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale15 B C ALA 4 C ALA 4 1_555 B N AIB 5 C AIB 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale16 B C AIB 5 C AIB 5 1_555 B N LEU 6 C LEU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale17 B C GLN 8 C GLN 8 1_555 B N AIB 9 C AIB 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale18 B C AIB 9 C AIB 9 1_555 B N LEU 10 C LEU 10 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.341 ? covale ? covale19 B C AIB 9 C AIB 9 1_555 B N LEU 10 C LEU 10 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.333 ? covale ? covale20 B C LEU 10 C LEU 10 1_555 B N15 I77 11 C I77 11 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.415 ? covale ? covale21 B C LEU 10 C LEU 10 1_555 B N15 I77 11 C I77 11 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.429 ? # _chem_comp.formula 'C2 H3 N' _chem_comp.formula_weight 41.052 _chem_comp.id CCN _chem_comp.mon_nstd_flag . _chem_comp.name ACETONITRILE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C1 CCN trip 28 n n C1 C2 CCN sing 29 n n C2 H21 CCN sing 30 n n C2 H22 CCN sing 31 n n C2 H23 CCN sing 32 n n # _atom_sites.entry_id 7TMK _atom_sites.fract_transf_matrix[1][1] 0.074649 _atom_sites.fract_transf_matrix[1][2] -0.002347 _atom_sites.fract_transf_matrix[1][3] 0.000302 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.072668 _atom_sites.fract_transf_matrix[2][3] -0.010131 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.036741 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CCN A 1 201 1 CCN ACN . D 2 CCN A 1 202 2 CCN ACN . E 2 CCN C 1 201 1 CCN ACN . F 3 HOH A 1 301 4 HOH HOH . F 3 HOH A 2 302 6 HOH HOH . F 3 HOH A 3 303 8 HOH HOH . F 3 HOH A 4 304 3 HOH HOH . F 3 HOH A 5 305 17 HOH HOH . F 3 HOH A 6 306 12 HOH HOH . F 3 HOH A 7 307 9 HOH HOH . F 3 HOH A 8 308 21 HOH HOH . F 3 HOH A 9 309 19 HOH HOH . F 3 HOH A 10 310 13 HOH HOH . F 3 HOH A 11 311 7 HOH HOH . G 3 HOH C 1 301 2 HOH HOH . G 3 HOH C 2 302 1 HOH HOH . G 3 HOH C 3 303 16 HOH HOH . G 3 HOH C 4 304 5 HOH HOH . G 3 HOH C 5 305 11 HOH HOH . G 3 HOH C 6 306 20 HOH HOH . G 3 HOH C 7 307 15 HOH HOH . G 3 HOH C 8 308 10 HOH HOH . G 3 HOH C 9 309 14 HOH HOH . G 3 HOH C 10 310 18 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N CCN . . . C 2 -0.27 5.569 -12.061 0.96 5.19 ? N CCN 201 A 1 HETATM 2 C C1 CCN . . . C 2 -0.34 4.532 -12.496 1 4.32 ? C1 CCN 201 A 1 HETATM 3 C C2 CCN . . . C 2 -0.409 3.14 -13.083 1 3.9 ? C2 CCN 201 A 1 HETATM 4 H H21 CCN . . . C 2 -1.432 2.785 -13.051 1 4.68 ? H21 CCN 201 A 1 HETATM 5 H H22 CCN . . . C 2 0.222 2.473 -12.507 1 4.68 ? H22 CCN 201 A 1 HETATM 6 H H23 CCN . . . C 2 -0.067 3.163 -14.11 0.99 4.68 ? H23 CCN 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #