data_7TNC # _model_server_result.job_id Q3NUaiSVOFQ6yylAlw_Z2Q _model_server_result.datetime_utc '2024-10-10 09:24:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tnc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7TNC # _exptl.entry_id 7TNC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TNC _cell.length_a 49.274 _cell.length_b 73.901 _cell.length_c 77.616 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TNC _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -49.274 0 0 3 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -49.274 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 26 A CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 A N ALA 1 A ALA 1 1_555 D CU CU . A CU 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.031 ? metalc ? metalc2 A O ALA 1 A ALA 1 1_555 D CU CU . A CU 203 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.181 ? metalc ? metalc3 A ND1 HIS 46 A HIS 46 1_555 C CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc4 A NE2 HIS 83 A HIS 83 1_555 D CU CU . A CU 203 8_544 ? ? ? ? B ? ? ? ? ? ? ? 2.487 ? metalc ? metalc5 A NE2 HIS 83 A HIS 83 1_555 D CU CU . A CU 203 8_544 ? ? ? ? A ? ? ? ? ? ? ? 1.862 ? metalc ? metalc6 A SG CYS 112 A CYS 112 1_555 C CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc7 A ND1 HIS 117 A HIS 117 1_555 C CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc8 B N TRS . A TRS 201 1_555 D CU CU . A CU 203 8_544 ? ? ? ? B ? ? ? ? ? ? ? 2.281 ? metalc ? metalc9 B N TRS . A TRS 201 1_555 D CU CU . A CU 203 8_544 ? ? ? ? A ? ? ? ? ? ? ? 1.846 ? metalc ? metalc10 B O3 TRS . A TRS 201 1_555 D CU CU . A CU 203 8_544 ? ? ? ? B ? ? ? ? ? ? ? 2.346 ? metalc ? metalc11 D CU CU . A CU 203 1_555 F O HOH . A HOH 332 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc12 D CU CU . A CU 203 1_555 F O HOH . A HOH 332 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.445 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 7TNC _atom_sites.fract_transf_matrix[1][1] 0.020295 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013532 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012884 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 201 201 TRS TRS . C 3 CU A 1 202 1 CU CU . D 3 CU A 1 203 2 CU CU . E 4 CL A 1 204 1 CL CL . F 5 HOH A 1 301 165 HOH HOH . F 5 HOH A 2 302 132 HOH HOH . F 5 HOH A 3 303 139 HOH HOH . F 5 HOH A 4 304 71 HOH HOH . F 5 HOH A 5 305 66 HOH HOH . F 5 HOH A 6 306 74 HOH HOH . F 5 HOH A 7 307 98 HOH HOH . F 5 HOH A 8 308 18 HOH HOH . F 5 HOH A 9 309 45 HOH HOH . F 5 HOH A 10 310 102 HOH HOH . F 5 HOH A 11 311 174 HOH HOH . F 5 HOH A 12 312 51 HOH HOH . F 5 HOH A 13 313 170 HOH HOH . F 5 HOH A 14 314 27 HOH HOH . F 5 HOH A 15 315 137 HOH HOH . F 5 HOH A 16 316 2 HOH HOH . F 5 HOH A 17 317 21 HOH HOH . F 5 HOH A 18 318 80 HOH HOH . F 5 HOH A 19 319 32 HOH HOH . F 5 HOH A 20 320 33 HOH HOH . F 5 HOH A 21 321 62 HOH HOH . F 5 HOH A 22 322 30 HOH HOH . F 5 HOH A 23 323 160 HOH HOH . F 5 HOH A 24 324 129 HOH HOH . F 5 HOH A 25 325 16 HOH HOH . F 5 HOH A 26 326 88 HOH HOH . F 5 HOH A 27 327 94 HOH HOH . F 5 HOH A 28 328 53 HOH HOH . F 5 HOH A 29 329 37 HOH HOH . F 5 HOH A 30 330 95 HOH HOH . F 5 HOH A 31 331 3 HOH HOH . F 5 HOH A 32 332 23 HOH HOH . F 5 HOH A 33 333 31 HOH HOH . F 5 HOH A 34 334 86 HOH HOH . F 5 HOH A 35 335 93 HOH HOH . F 5 HOH A 36 336 44 HOH HOH . F 5 HOH A 37 337 24 HOH HOH . F 5 HOH A 38 338 43 HOH HOH . F 5 HOH A 39 339 79 HOH HOH . F 5 HOH A 40 340 29 HOH HOH . F 5 HOH A 41 341 11 HOH HOH . F 5 HOH A 42 342 1 HOH HOH . F 5 HOH A 43 343 168 HOH HOH . F 5 HOH A 44 344 9 HOH HOH . F 5 HOH A 45 345 60 HOH HOH . F 5 HOH A 46 346 26 HOH HOH . F 5 HOH A 47 347 100 HOH HOH . F 5 HOH A 48 348 166 HOH HOH . F 5 HOH A 49 349 70 HOH HOH . F 5 HOH A 50 350 134 HOH HOH . F 5 HOH A 51 351 55 HOH HOH . F 5 HOH A 52 352 8 HOH HOH . F 5 HOH A 53 353 108 HOH HOH . F 5 HOH A 54 354 36 HOH HOH . F 5 HOH A 55 355 159 HOH HOH . F 5 HOH A 56 356 156 HOH HOH . F 5 HOH A 57 357 110 HOH HOH . F 5 HOH A 58 358 81 HOH HOH . F 5 HOH A 59 359 76 HOH HOH . F 5 HOH A 60 360 4 HOH HOH . F 5 HOH A 61 361 112 HOH HOH . F 5 HOH A 62 362 22 HOH HOH . F 5 HOH A 63 363 90 HOH HOH . F 5 HOH A 64 364 6 HOH HOH . F 5 HOH A 65 365 64 HOH HOH . F 5 HOH A 66 366 14 HOH HOH . F 5 HOH A 67 367 69 HOH HOH . F 5 HOH A 68 368 141 HOH HOH . F 5 HOH A 69 369 67 HOH HOH . F 5 HOH A 70 370 103 HOH HOH . F 5 HOH A 71 371 91 HOH HOH . F 5 HOH A 72 372 116 HOH HOH . F 5 HOH A 73 373 82 HOH HOH . F 5 HOH A 74 374 133 HOH HOH . F 5 HOH A 75 375 12 HOH HOH . F 5 HOH A 76 376 77 HOH HOH . F 5 HOH A 77 377 130 HOH HOH . F 5 HOH A 78 378 87 HOH HOH . F 5 HOH A 79 379 41 HOH HOH . F 5 HOH A 80 380 150 HOH HOH . F 5 HOH A 81 381 83 HOH HOH . F 5 HOH A 82 382 20 HOH HOH . F 5 HOH A 83 383 117 HOH HOH . F 5 HOH A 84 384 115 HOH HOH . F 5 HOH A 85 385 122 HOH HOH . F 5 HOH A 86 386 40 HOH HOH . F 5 HOH A 87 387 52 HOH HOH . F 5 HOH A 88 388 124 HOH HOH . F 5 HOH A 89 389 61 HOH HOH . F 5 HOH A 90 390 17 HOH HOH . F 5 HOH A 91 391 120 HOH HOH . F 5 HOH A 92 392 180 HOH HOH . F 5 HOH A 93 393 142 HOH HOH . F 5 HOH A 94 394 127 HOH HOH . F 5 HOH A 95 395 50 HOH HOH . F 5 HOH A 96 396 38 HOH HOH . F 5 HOH A 97 397 46 HOH HOH . F 5 HOH A 98 398 123 HOH HOH . F 5 HOH A 99 399 25 HOH HOH . F 5 HOH A 100 400 19 HOH HOH . F 5 HOH A 101 401 171 HOH HOH . F 5 HOH A 102 402 155 HOH HOH . F 5 HOH A 103 403 47 HOH HOH . F 5 HOH A 104 404 78 HOH HOH . F 5 HOH A 105 405 5 HOH HOH . F 5 HOH A 106 406 42 HOH HOH . F 5 HOH A 107 407 175 HOH HOH . F 5 HOH A 108 408 48 HOH HOH . F 5 HOH A 109 409 154 HOH HOH . F 5 HOH A 110 410 140 HOH HOH . F 5 HOH A 111 411 7 HOH HOH . F 5 HOH A 112 412 146 HOH HOH . F 5 HOH A 113 413 13 HOH HOH . F 5 HOH A 114 414 131 HOH HOH . F 5 HOH A 115 415 147 HOH HOH . F 5 HOH A 116 416 144 HOH HOH . F 5 HOH A 117 417 65 HOH HOH . F 5 HOH A 118 418 73 HOH HOH . F 5 HOH A 119 419 101 HOH HOH . F 5 HOH A 120 420 97 HOH HOH . F 5 HOH A 121 421 167 HOH HOH . F 5 HOH A 122 422 113 HOH HOH . F 5 HOH A 123 423 173 HOH HOH . F 5 HOH A 124 424 162 HOH HOH . F 5 HOH A 125 425 15 HOH HOH . F 5 HOH A 126 426 49 HOH HOH . F 5 HOH A 127 427 172 HOH HOH . F 5 HOH A 128 428 92 HOH HOH . F 5 HOH A 129 429 128 HOH HOH . F 5 HOH A 130 430 114 HOH HOH . F 5 HOH A 131 431 106 HOH HOH . F 5 HOH A 132 432 10 HOH HOH . F 5 HOH A 133 433 63 HOH HOH . F 5 HOH A 134 434 96 HOH HOH . F 5 HOH A 135 435 178 HOH HOH . F 5 HOH A 136 436 169 HOH HOH . F 5 HOH A 137 437 89 HOH HOH . F 5 HOH A 138 438 143 HOH HOH . F 5 HOH A 139 439 39 HOH HOH . F 5 HOH A 140 440 164 HOH HOH . F 5 HOH A 141 441 107 HOH HOH . F 5 HOH A 142 442 59 HOH HOH . F 5 HOH A 143 443 54 HOH HOH . F 5 HOH A 144 444 145 HOH HOH . F 5 HOH A 145 445 35 HOH HOH . F 5 HOH A 146 446 118 HOH HOH . F 5 HOH A 147 447 28 HOH HOH . F 5 HOH A 148 448 179 HOH HOH . F 5 HOH A 149 449 121 HOH HOH . F 5 HOH A 150 450 149 HOH HOH . F 5 HOH A 151 451 34 HOH HOH . F 5 HOH A 152 452 68 HOH HOH . F 5 HOH A 153 453 57 HOH HOH . F 5 HOH A 154 454 109 HOH HOH . F 5 HOH A 155 455 125 HOH HOH . F 5 HOH A 156 456 152 HOH HOH . F 5 HOH A 157 457 158 HOH HOH . F 5 HOH A 158 458 84 HOH HOH . F 5 HOH A 159 459 136 HOH HOH . F 5 HOH A 160 460 58 HOH HOH . F 5 HOH A 161 461 105 HOH HOH . F 5 HOH A 162 462 72 HOH HOH . F 5 HOH A 163 463 151 HOH HOH . F 5 HOH A 164 464 135 HOH HOH . F 5 HOH A 165 465 157 HOH HOH . F 5 HOH A 166 466 56 HOH HOH . F 5 HOH A 167 467 177 HOH HOH . F 5 HOH A 168 468 138 HOH HOH . F 5 HOH A 169 469 75 HOH HOH . F 5 HOH A 170 470 104 HOH HOH . F 5 HOH A 171 471 163 HOH HOH . F 5 HOH A 172 472 85 HOH HOH . F 5 HOH A 173 473 126 HOH HOH . F 5 HOH A 174 474 99 HOH HOH . F 5 HOH A 175 475 148 HOH HOH . F 5 HOH A 176 476 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 -6.61 -19.151 -13.147 1 25.8 ? C TRS 201 A 1 HETATM 2 C C1 TRS . . . B 2 -6.116 -20.58 -13.341 1 32.57 ? C1 TRS 201 A 1 HETATM 3 C C2 TRS . . . B 2 -5.69 -18.392 -12.191 1 26.39 ? C2 TRS 201 A 1 HETATM 4 C C3 TRS . . . B 2 -8.045 -19.126 -12.624 1 23.35 ? C3 TRS 201 A 1 HETATM 5 N N TRS . . . B 2 -6.524 -18.502 -14.45 1 21.44 ? N TRS 201 A 1 HETATM 6 O O1 TRS . . . B 2 -4.822 -20.502 -13.896 1 31.43 ? O1 TRS 201 A 1 HETATM 7 O O2 TRS . . . B 2 -5.653 -19.079 -10.965 1 29.26 ? O2 TRS 201 A 1 HETATM 8 O O3 TRS . . . B 2 -8.952 -19.644 -13.577 1 28.32 ? O3 TRS 201 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #