data_7TO7 # _model_server_result.job_id YrkV3gtRTPw_vY53sr9iHQ _model_server_result.datetime_utc '2024-11-15 03:00:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7to7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 7TO7 # _exptl.entry_id 7TO7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TO7 _cell.length_a 41.862 _cell.length_b 99.277 _cell.length_c 120.608 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TO7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,I,J,K 1 1 D,E,F,H,L,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 C C ALA 7 C ALA 7 1_555 C N ALY 8 C ALY 8 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.33 ? covale ? covale2 C C ALA 7 C ALA 7 1_555 C N ALY 8 C ALY 8 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.331 ? covale ? covale3 C C ALY 8 C ALY 8 1_555 C N LEU 9 C LEU 9 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.328 ? covale ? covale4 C C ALY 8 C ALY 8 1_555 C N LEU 9 C LEU 9 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale5 F C ALA 7 F ALA 7 1_555 F N ALY 8 F ALY 8 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.334 ? covale ? covale6 F C ALA 7 F ALA 7 1_555 F N ALY 8 F ALY 8 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.331 ? covale ? covale7 F C ALY 8 F ALY 8 1_555 F N LEU 9 F LEU 9 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.332 ? covale ? covale8 F C ALY 8 F ALY 8 1_555 F N LEU 9 F LEU 9 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 157 n n C1 C2 GOL sing 158 n n C1 H11 GOL sing 159 n n C1 H12 GOL sing 160 n n O1 HO1 GOL sing 161 n n C2 O2 GOL sing 162 n n C2 C3 GOL sing 163 n n C2 H2 GOL sing 164 n n O2 HO2 GOL sing 165 n n C3 O3 GOL sing 166 n n C3 H31 GOL sing 167 n n C3 H32 GOL sing 168 n n O3 HO3 GOL sing 169 n n # _atom_sites.entry_id 7TO7 _atom_sites.fract_transf_matrix[1][1] 0.023888 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010073 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 GOL B 1 201 1 GOL GOL . H 3 GOL E 1 201 2 GOL GOL . I 4 HOH A 1 201 60 HOH HOH . I 4 HOH A 2 202 13 HOH HOH . I 4 HOH A 3 203 124 HOH HOH . I 4 HOH A 4 204 62 HOH HOH . I 4 HOH A 5 205 29 HOH HOH . I 4 HOH A 6 206 156 HOH HOH . I 4 HOH A 7 207 79 HOH HOH . I 4 HOH A 8 208 106 HOH HOH . I 4 HOH A 9 209 24 HOH HOH . I 4 HOH A 10 210 48 HOH HOH . I 4 HOH A 11 211 147 HOH HOH . I 4 HOH A 12 212 35 HOH HOH . I 4 HOH A 13 213 41 HOH HOH . I 4 HOH A 14 214 142 HOH HOH . I 4 HOH A 15 215 36 HOH HOH . I 4 HOH A 16 216 174 HOH HOH . I 4 HOH A 17 217 121 HOH HOH . I 4 HOH A 18 218 66 HOH HOH . I 4 HOH A 19 219 195 HOH HOH . I 4 HOH A 20 220 140 HOH HOH . I 4 HOH A 21 221 168 HOH HOH . I 4 HOH A 22 222 47 HOH HOH . I 4 HOH A 23 223 153 HOH HOH . I 4 HOH A 24 224 8 HOH HOH . I 4 HOH A 25 225 125 HOH HOH . I 4 HOH A 26 226 51 HOH HOH . I 4 HOH A 27 227 86 HOH HOH . I 4 HOH A 28 228 11 HOH HOH . I 4 HOH A 29 229 3 HOH HOH . I 4 HOH A 30 230 164 HOH HOH . I 4 HOH A 31 231 68 HOH HOH . I 4 HOH A 32 232 161 HOH HOH . I 4 HOH A 33 233 128 HOH HOH . I 4 HOH A 34 234 98 HOH HOH . I 4 HOH A 35 235 54 HOH HOH . I 4 HOH A 36 236 97 HOH HOH . I 4 HOH A 37 237 179 HOH HOH . I 4 HOH A 38 238 85 HOH HOH . I 4 HOH A 39 239 119 HOH HOH . I 4 HOH A 40 240 33 HOH HOH . I 4 HOH A 41 241 143 HOH HOH . I 4 HOH A 42 242 118 HOH HOH . I 4 HOH A 43 243 63 HOH HOH . I 4 HOH A 44 244 187 HOH HOH . I 4 HOH A 45 245 9 HOH HOH . I 4 HOH A 46 246 182 HOH HOH . I 4 HOH A 47 247 99 HOH HOH . I 4 HOH A 48 248 100 HOH HOH . J 4 HOH B 1 301 101 HOH HOH . J 4 HOH B 2 302 117 HOH HOH . J 4 HOH B 3 303 20 HOH HOH . J 4 HOH B 4 304 171 HOH HOH . J 4 HOH B 5 305 40 HOH HOH . J 4 HOH B 6 306 32 HOH HOH . J 4 HOH B 7 307 15 HOH HOH . J 4 HOH B 8 308 173 HOH HOH . J 4 HOH B 9 309 18 HOH HOH . J 4 HOH B 10 310 55 HOH HOH . J 4 HOH B 11 311 150 HOH HOH . J 4 HOH B 12 312 127 HOH HOH . J 4 HOH B 13 313 72 HOH HOH . J 4 HOH B 14 314 59 HOH HOH . J 4 HOH B 15 315 111 HOH HOH . J 4 HOH B 16 316 157 HOH HOH . J 4 HOH B 17 317 196 HOH HOH . J 4 HOH B 18 318 200 HOH HOH . J 4 HOH B 19 319 112 HOH HOH . J 4 HOH B 20 320 180 HOH HOH . J 4 HOH B 21 321 139 HOH HOH . K 4 HOH C 1 101 108 HOH HOH . K 4 HOH C 2 102 102 HOH HOH . L 4 HOH D 1 201 89 HOH HOH . L 4 HOH D 2 202 141 HOH HOH . L 4 HOH D 3 203 69 HOH HOH . L 4 HOH D 4 204 115 HOH HOH . L 4 HOH D 5 205 57 HOH HOH . L 4 HOH D 6 206 122 HOH HOH . L 4 HOH D 7 207 123 HOH HOH . L 4 HOH D 8 208 7 HOH HOH . L 4 HOH D 9 209 92 HOH HOH . L 4 HOH D 10 210 44 HOH HOH . L 4 HOH D 11 211 87 HOH HOH . L 4 HOH D 12 212 6 HOH HOH . L 4 HOH D 13 213 12 HOH HOH . L 4 HOH D 14 214 190 HOH HOH . L 4 HOH D 15 215 1 HOH HOH . L 4 HOH D 16 216 80 HOH HOH . L 4 HOH D 17 217 34 HOH HOH . L 4 HOH D 18 218 46 HOH HOH . L 4 HOH D 19 219 56 HOH HOH . L 4 HOH D 20 220 104 HOH HOH . L 4 HOH D 21 221 77 HOH HOH . L 4 HOH D 22 222 84 HOH HOH . L 4 HOH D 23 223 31 HOH HOH . L 4 HOH D 24 224 26 HOH HOH . L 4 HOH D 25 225 78 HOH HOH . L 4 HOH D 26 226 10 HOH HOH . L 4 HOH D 27 227 165 HOH HOH . L 4 HOH D 28 228 154 HOH HOH . L 4 HOH D 29 229 67 HOH HOH . L 4 HOH D 30 230 2 HOH HOH . L 4 HOH D 31 231 38 HOH HOH . L 4 HOH D 32 232 198 HOH HOH . L 4 HOH D 33 233 91 HOH HOH . L 4 HOH D 34 234 138 HOH HOH . L 4 HOH D 35 235 28 HOH HOH . L 4 HOH D 36 236 170 HOH HOH . L 4 HOH D 37 237 193 HOH HOH . L 4 HOH D 38 238 176 HOH HOH . L 4 HOH D 39 239 181 HOH HOH . L 4 HOH D 40 240 160 HOH HOH . L 4 HOH D 41 241 114 HOH HOH . M 4 HOH E 1 301 130 HOH HOH . M 4 HOH E 2 302 61 HOH HOH . M 4 HOH E 3 303 178 HOH HOH . M 4 HOH E 4 304 177 HOH HOH . M 4 HOH E 5 305 16 HOH HOH . M 4 HOH E 6 306 81 HOH HOH . M 4 HOH E 7 307 23 HOH HOH . M 4 HOH E 8 308 94 HOH HOH . M 4 HOH E 9 309 27 HOH HOH . M 4 HOH E 10 310 146 HOH HOH . M 4 HOH E 11 311 21 HOH HOH . M 4 HOH E 12 312 169 HOH HOH . M 4 HOH E 13 313 163 HOH HOH . M 4 HOH E 14 314 5 HOH HOH . M 4 HOH E 15 315 73 HOH HOH . M 4 HOH E 16 316 43 HOH HOH . M 4 HOH E 17 317 107 HOH HOH . M 4 HOH E 18 318 4 HOH HOH . M 4 HOH E 19 319 134 HOH HOH . M 4 HOH E 20 320 137 HOH HOH . M 4 HOH E 21 321 64 HOH HOH . M 4 HOH E 22 322 53 HOH HOH . M 4 HOH E 23 323 39 HOH HOH . M 4 HOH E 24 324 83 HOH HOH . M 4 HOH E 25 325 192 HOH HOH . M 4 HOH E 26 326 202 HOH HOH . M 4 HOH E 27 327 30 HOH HOH . M 4 HOH E 28 328 17 HOH HOH . M 4 HOH E 29 329 58 HOH HOH . M 4 HOH E 30 330 159 HOH HOH . M 4 HOH E 31 331 110 HOH HOH . M 4 HOH E 32 332 129 HOH HOH . M 4 HOH E 33 333 158 HOH HOH . M 4 HOH E 34 334 149 HOH HOH . M 4 HOH E 35 335 191 HOH HOH . M 4 HOH E 36 336 148 HOH HOH . M 4 HOH E 37 337 95 HOH HOH . M 4 HOH E 38 338 152 HOH HOH . M 4 HOH E 39 339 184 HOH HOH . M 4 HOH E 40 340 166 HOH HOH . M 4 HOH E 41 341 194 HOH HOH . M 4 HOH E 42 342 145 HOH HOH . N 4 HOH F 1 101 42 HOH HOH . N 4 HOH F 2 102 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 34.77 5.562 8.024 1 33.14 ? C1 GOL 201 B 1 HETATM 2 O O1 GOL . . . G 3 35.959 6.29 8.316 1 34.81 ? O1 GOL 201 B 1 HETATM 3 C C2 GOL . . . G 3 33.658 6.131 8.95 1 29.65 ? C2 GOL 201 B 1 HETATM 4 O O2 GOL . . . G 3 33.963 5.932 10.308 1 23.53 ? O2 GOL 201 B 1 HETATM 5 C C3 GOL . . . G 3 33.505 7.641 8.533 1 29.83 ? C3 GOL 201 B 1 HETATM 6 O O3 GOL . . . G 3 32.223 8.078 8.923 1 22.82 ? O3 GOL 201 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 433 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #