data_7TQF # _model_server_result.job_id 8eRopCzuTEzAUQYmoglVWg _model_server_result.datetime_utc '2024-11-30 11:07:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tqf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7TQF # _exptl.entry_id 7TQF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TQF _cell.length_a 45.595 _cell.length_b 74.173 _cell.length_c 74.688 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TQF _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -74.173 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 16 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc2 A SG CYS 98 A CYS 97 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.291 ? metalc ? metalc3 A SG CYS 98 A CYS 97 1_555 C FE1 SFS . A SFS 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.291 ? metalc ? metalc4 A SG CYS 133 A CYS 132 1_555 B FE2 SF4 . A SF4 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.304 ? metalc ? metalc5 A SG CYS 133 A CYS 132 1_555 C FE2 SFS . A SFS 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.304 ? metalc ? metalc6 D O3B ADP . A ADP 303 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc7 E MG MG . A MG 304 1_555 F O HOH . A HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc8 E MG MG . A MG 304 1_555 F O HOH . A HOH 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc9 E MG MG . A MG 304 1_555 F O HOH . A HOH 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc10 E MG MG . A MG 304 1_555 F O HOH . A HOH 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 334 n n FE1 S3 SF4 sing 335 n n FE1 S4 SF4 sing 336 n n FE2 S1 SF4 sing 337 n n FE2 S3 SF4 sing 338 n n FE2 S4 SF4 sing 339 n n FE3 S1 SF4 sing 340 n n FE3 S2 SF4 sing 341 n n FE3 S4 SF4 sing 342 n n FE4 S1 SF4 sing 343 n n FE4 S2 SF4 sing 344 n n FE4 S3 SF4 sing 345 n n # _atom_sites.entry_id 7TQF _atom_sites.fract_transf_matrix[1][1] 0.021932 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013482 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013389 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SF4 A 1 301 301 SF4 SF4 . C 3 SFS A 1 302 302 SFS SFS . D 4 ADP A 1 303 305 ADP ADP . E 5 MG A 1 304 306 MG MG . F 6 HOH A 1 401 147 HOH HOH . F 6 HOH A 2 402 81 HOH HOH . F 6 HOH A 3 403 124 HOH HOH . F 6 HOH A 4 404 143 HOH HOH . F 6 HOH A 5 405 42 HOH HOH . F 6 HOH A 6 406 192 HOH HOH . F 6 HOH A 7 407 163 HOH HOH . F 6 HOH A 8 408 195 HOH HOH . F 6 HOH A 9 409 76 HOH HOH . F 6 HOH A 10 410 25 HOH HOH . F 6 HOH A 11 411 156 HOH HOH . F 6 HOH A 12 412 119 HOH HOH . F 6 HOH A 13 413 82 HOH HOH . F 6 HOH A 14 414 88 HOH HOH . F 6 HOH A 15 415 47 HOH HOH . F 6 HOH A 16 416 193 HOH HOH . F 6 HOH A 17 417 117 HOH HOH . F 6 HOH A 18 418 197 HOH HOH . F 6 HOH A 19 419 128 HOH HOH . F 6 HOH A 20 420 26 HOH HOH . F 6 HOH A 21 421 56 HOH HOH . F 6 HOH A 22 422 121 HOH HOH . F 6 HOH A 23 423 129 HOH HOH . F 6 HOH A 24 424 38 HOH HOH . F 6 HOH A 25 425 199 HOH HOH . F 6 HOH A 26 426 70 HOH HOH . F 6 HOH A 27 427 125 HOH HOH . F 6 HOH A 28 428 40 HOH HOH . F 6 HOH A 29 429 115 HOH HOH . F 6 HOH A 30 430 30 HOH HOH . F 6 HOH A 31 431 101 HOH HOH . F 6 HOH A 32 432 204 HOH HOH . F 6 HOH A 33 433 23 HOH HOH . F 6 HOH A 34 434 53 HOH HOH . F 6 HOH A 35 435 138 HOH HOH . F 6 HOH A 36 436 79 HOH HOH . F 6 HOH A 37 437 10 HOH HOH . F 6 HOH A 38 438 174 HOH HOH . F 6 HOH A 39 439 207 HOH HOH . F 6 HOH A 40 440 5 HOH HOH . F 6 HOH A 41 441 24 HOH HOH . F 6 HOH A 42 442 11 HOH HOH . F 6 HOH A 43 443 9 HOH HOH . F 6 HOH A 44 444 61 HOH HOH . F 6 HOH A 45 445 34 HOH HOH . F 6 HOH A 46 446 14 HOH HOH . F 6 HOH A 47 447 78 HOH HOH . F 6 HOH A 48 448 29 HOH HOH . F 6 HOH A 49 449 2 HOH HOH . F 6 HOH A 50 450 18 HOH HOH . F 6 HOH A 51 451 66 HOH HOH . F 6 HOH A 52 452 15 HOH HOH . F 6 HOH A 53 453 4 HOH HOH . F 6 HOH A 54 454 3 HOH HOH . F 6 HOH A 55 455 57 HOH HOH . F 6 HOH A 56 456 22 HOH HOH . F 6 HOH A 57 457 168 HOH HOH . F 6 HOH A 58 458 80 HOH HOH . F 6 HOH A 59 459 35 HOH HOH . F 6 HOH A 60 460 159 HOH HOH . F 6 HOH A 61 461 46 HOH HOH . F 6 HOH A 62 462 60 HOH HOH . F 6 HOH A 63 463 37 HOH HOH . F 6 HOH A 64 464 6 HOH HOH . F 6 HOH A 65 465 102 HOH HOH . F 6 HOH A 66 466 107 HOH HOH . F 6 HOH A 67 467 7 HOH HOH . F 6 HOH A 68 468 105 HOH HOH . F 6 HOH A 69 469 20 HOH HOH . F 6 HOH A 70 470 162 HOH HOH . F 6 HOH A 71 471 114 HOH HOH . F 6 HOH A 72 472 93 HOH HOH . F 6 HOH A 73 473 33 HOH HOH . F 6 HOH A 74 474 43 HOH HOH . F 6 HOH A 75 475 218 HOH HOH . F 6 HOH A 76 476 39 HOH HOH . F 6 HOH A 77 477 86 HOH HOH . F 6 HOH A 78 478 98 HOH HOH . F 6 HOH A 79 479 160 HOH HOH . F 6 HOH A 80 480 62 HOH HOH . F 6 HOH A 81 481 91 HOH HOH . F 6 HOH A 82 482 64 HOH HOH . F 6 HOH A 83 483 1 HOH HOH . F 6 HOH A 84 484 27 HOH HOH . F 6 HOH A 85 485 32 HOH HOH . F 6 HOH A 86 486 12 HOH HOH . F 6 HOH A 87 487 28 HOH HOH . F 6 HOH A 88 488 122 HOH HOH . F 6 HOH A 89 489 209 HOH HOH . F 6 HOH A 90 490 17 HOH HOH . F 6 HOH A 91 491 171 HOH HOH . F 6 HOH A 92 492 208 HOH HOH . F 6 HOH A 93 493 13 HOH HOH . F 6 HOH A 94 494 54 HOH HOH . F 6 HOH A 95 495 8 HOH HOH . F 6 HOH A 96 496 73 HOH HOH . F 6 HOH A 97 497 71 HOH HOH . F 6 HOH A 98 498 123 HOH HOH . F 6 HOH A 99 499 36 HOH HOH . F 6 HOH A 100 500 126 HOH HOH . F 6 HOH A 101 501 21 HOH HOH . F 6 HOH A 102 502 94 HOH HOH . F 6 HOH A 103 503 59 HOH HOH . F 6 HOH A 104 504 84 HOH HOH . F 6 HOH A 105 505 50 HOH HOH . F 6 HOH A 106 506 44 HOH HOH . F 6 HOH A 107 507 108 HOH HOH . F 6 HOH A 108 508 212 HOH HOH . F 6 HOH A 109 509 90 HOH HOH . F 6 HOH A 110 510 58 HOH HOH . F 6 HOH A 111 511 63 HOH HOH . F 6 HOH A 112 512 106 HOH HOH . F 6 HOH A 113 513 19 HOH HOH . F 6 HOH A 114 514 172 HOH HOH . F 6 HOH A 115 515 188 HOH HOH . F 6 HOH A 116 516 68 HOH HOH . F 6 HOH A 117 517 194 HOH HOH . F 6 HOH A 118 518 169 HOH HOH . F 6 HOH A 119 519 52 HOH HOH . F 6 HOH A 120 520 145 HOH HOH . F 6 HOH A 121 521 140 HOH HOH . F 6 HOH A 122 522 67 HOH HOH . F 6 HOH A 123 523 206 HOH HOH . F 6 HOH A 124 524 77 HOH HOH . F 6 HOH A 125 525 176 HOH HOH . F 6 HOH A 126 526 45 HOH HOH . F 6 HOH A 127 527 118 HOH HOH . F 6 HOH A 128 528 103 HOH HOH . F 6 HOH A 129 529 49 HOH HOH . F 6 HOH A 130 530 99 HOH HOH . F 6 HOH A 131 531 201 HOH HOH . F 6 HOH A 132 532 182 HOH HOH . F 6 HOH A 133 533 120 HOH HOH . F 6 HOH A 134 534 65 HOH HOH . F 6 HOH A 135 535 95 HOH HOH . F 6 HOH A 136 536 154 HOH HOH . F 6 HOH A 137 537 130 HOH HOH . F 6 HOH A 138 538 55 HOH HOH . F 6 HOH A 139 539 220 HOH HOH . F 6 HOH A 140 540 92 HOH HOH . F 6 HOH A 141 541 111 HOH HOH . F 6 HOH A 142 542 100 HOH HOH . F 6 HOH A 143 543 16 HOH HOH . F 6 HOH A 144 544 148 HOH HOH . F 6 HOH A 145 545 41 HOH HOH . F 6 HOH A 146 546 161 HOH HOH . F 6 HOH A 147 547 85 HOH HOH . F 6 HOH A 148 548 116 HOH HOH . F 6 HOH A 149 549 113 HOH HOH . F 6 HOH A 150 550 51 HOH HOH . F 6 HOH A 151 551 157 HOH HOH . F 6 HOH A 152 552 127 HOH HOH . F 6 HOH A 153 553 69 HOH HOH . F 6 HOH A 154 554 89 HOH HOH . F 6 HOH A 155 555 74 HOH HOH . F 6 HOH A 156 556 196 HOH HOH . F 6 HOH A 157 557 189 HOH HOH . F 6 HOH A 158 558 153 HOH HOH . F 6 HOH A 159 559 141 HOH HOH . F 6 HOH A 160 560 131 HOH HOH . F 6 HOH A 161 561 31 HOH HOH . F 6 HOH A 162 562 151 HOH HOH . F 6 HOH A 163 563 203 HOH HOH . F 6 HOH A 164 564 110 HOH HOH . F 6 HOH A 165 565 190 HOH HOH . F 6 HOH A 166 566 219 HOH HOH . F 6 HOH A 167 567 142 HOH HOH . F 6 HOH A 168 568 146 HOH HOH . F 6 HOH A 169 569 186 HOH HOH . F 6 HOH A 170 570 83 HOH HOH . F 6 HOH A 171 571 217 HOH HOH . F 6 HOH A 172 572 75 HOH HOH . F 6 HOH A 173 573 180 HOH HOH . F 6 HOH A 174 574 191 HOH HOH . F 6 HOH A 175 575 175 HOH HOH . F 6 HOH A 176 576 183 HOH HOH . F 6 HOH A 177 577 167 HOH HOH . F 6 HOH A 178 578 216 HOH HOH . F 6 HOH A 179 579 213 HOH HOH . F 6 HOH A 180 580 215 HOH HOH . F 6 HOH A 181 581 187 HOH HOH . F 6 HOH A 182 582 181 HOH HOH . F 6 HOH A 183 583 134 HOH HOH . F 6 HOH A 184 584 214 HOH HOH . F 6 HOH A 185 585 109 HOH HOH . F 6 HOH A 186 586 135 HOH HOH . F 6 HOH A 187 587 221 HOH HOH . F 6 HOH A 188 588 185 HOH HOH . F 6 HOH A 189 589 210 HOH HOH . F 6 HOH A 190 590 205 HOH HOH . F 6 HOH A 191 591 211 HOH HOH . F 6 HOH A 192 592 96 HOH HOH . F 6 HOH A 193 593 155 HOH HOH . F 6 HOH A 194 594 48 HOH HOH . F 6 HOH A 195 595 150 HOH HOH . F 6 HOH A 196 596 87 HOH HOH . F 6 HOH A 197 597 177 HOH HOH . F 6 HOH A 198 598 184 HOH HOH . F 6 HOH A 199 599 179 HOH HOH . F 6 HOH A 200 600 158 HOH HOH . F 6 HOH A 201 601 112 HOH HOH . F 6 HOH A 202 602 139 HOH HOH . F 6 HOH A 203 603 133 HOH HOH . F 6 HOH A 204 604 132 HOH HOH . F 6 HOH A 205 605 170 HOH HOH . F 6 HOH A 206 606 104 HOH HOH . F 6 HOH A 207 607 198 HOH HOH . F 6 HOH A 208 608 164 HOH HOH . F 6 HOH A 209 609 200 HOH HOH . F 6 HOH A 210 610 149 HOH HOH . F 6 HOH A 211 611 178 HOH HOH . F 6 HOH A 212 612 97 HOH HOH . F 6 HOH A 213 613 166 HOH HOH . F 6 HOH A 214 614 144 HOH HOH . F 6 HOH A 215 615 72 HOH HOH . F 6 HOH A 216 616 173 HOH HOH . F 6 HOH A 217 617 137 HOH HOH . F 6 HOH A 218 618 136 HOH HOH . F 6 HOH A 219 619 202 HOH HOH . F 6 HOH A 220 620 165 HOH HOH . F 6 HOH A 221 621 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . A . B 2 13.323 -35.785 -0.51 0.37 18.9 ? FE1 SF4 301 A 1 HETATM 2 FE FE2 SF4 . A . B 2 11.528 -36.704 1.346 0.55 18.9 ? FE2 SF4 301 A 1 HETATM 3 S S3 SF4 . A . B 2 11.049 -35.377 -0.476 0.37 18.9 ? S3 SF4 301 A 1 HETATM 4 S S4 SF4 . A . B 2 13.808 -36.435 1.638 0.55 18.9 ? S4 SF4 301 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 373 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #