data_7TQF
#
_model_server_result.job_id            Far6yIK6voQYjx9Zl0oyIw 
_model_server_result.datetime_utc      '2024-10-19 12:21:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7tqf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    7TQF 
#
_exptl.entry_id    7TQF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              539.22 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'Fe4-Se4 cluster' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7TQF 
_cell.length_a            45.595 
_cell.length_b            74.173 
_cell.length_c            74.688 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7TQF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 2 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -74.173 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 17 A SER 16 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc2 A SG CYS 98 A CYS 97 1_555 B FE1 SF4 . A SF4 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc3 A SG CYS 98 A CYS 97 1_555 C FE1 SFS . A SFS 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc4 A SG CYS 133 A CYS 132 1_555 B FE2 SF4 . A SF4 301 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc5 A SG CYS 133 A CYS 132 1_555 C FE2 SFS . A SFS 302 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc6 D O3B ADP . A ADP 303 1_555 E MG MG . A MG 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc7 E MG MG . A MG 304 1_555 F O HOH . A HOH 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc8 E MG MG . A MG 304 1_555 F O HOH . A HOH 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? 
metalc ? metalc9 E MG MG . A MG 304 1_555 F O HOH . A HOH 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
metalc ? metalc10 E MG MG . A MG 304 1_555 F O HOH . A HOH 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
#
_chem_comp.formula           'Fe4 Se4' 
_chem_comp.formula_weight    539.22 
_chem_comp.id                SFS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'Fe4-Se4 cluster' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
SE4 FE1 SFS sing 346 n n 
SE4 FE3 SFS sing 347 n n 
SE4 FE2 SFS sing 348 n n 
FE1 SE3 SFS sing 349 n n 
FE1 SE2 SFS sing 350 n n 
FE3 SE2 SFS sing 351 n n 
FE3 SE1 SFS sing 352 n n 
FE2 SE3 SFS sing 353 n n 
FE2 SE1 SFS sing 354 n n 
SE3 FE4 SFS sing 355 n n 
FE4 SE2 SFS sing 356 n n 
FE4 SE1 SFS sing 357 n n 
#
_atom_sites.entry_id                     7TQF 
_atom_sites.fract_transf_matrix[1][1]    0.021932 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013482 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013389 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SF4 A 1 301 301 SF4 SF4 . 
C 3 SFS A 1 302 302 SFS SFS . 
D 4 ADP A 1 303 305 ADP ADP . 
E 5 MG A 1 304 306 MG MG . 
F 6 HOH A 1 401 147 HOH HOH . 
F 6 HOH A 2 402 81 HOH HOH . 
F 6 HOH A 3 403 124 HOH HOH . 
F 6 HOH A 4 404 143 HOH HOH . 
F 6 HOH A 5 405 42 HOH HOH . 
F 6 HOH A 6 406 192 HOH HOH . 
F 6 HOH A 7 407 163 HOH HOH . 
F 6 HOH A 8 408 195 HOH HOH . 
F 6 HOH A 9 409 76 HOH HOH . 
F 6 HOH A 10 410 25 HOH HOH . 
F 6 HOH A 11 411 156 HOH HOH . 
F 6 HOH A 12 412 119 HOH HOH . 
F 6 HOH A 13 413 82 HOH HOH . 
F 6 HOH A 14 414 88 HOH HOH . 
F 6 HOH A 15 415 47 HOH HOH . 
F 6 HOH A 16 416 193 HOH HOH . 
F 6 HOH A 17 417 117 HOH HOH . 
F 6 HOH A 18 418 197 HOH HOH . 
F 6 HOH A 19 419 128 HOH HOH . 
F 6 HOH A 20 420 26 HOH HOH . 
F 6 HOH A 21 421 56 HOH HOH . 
F 6 HOH A 22 422 121 HOH HOH . 
F 6 HOH A 23 423 129 HOH HOH . 
F 6 HOH A 24 424 38 HOH HOH . 
F 6 HOH A 25 425 199 HOH HOH . 
F 6 HOH A 26 426 70 HOH HOH . 
F 6 HOH A 27 427 125 HOH HOH . 
F 6 HOH A 28 428 40 HOH HOH . 
F 6 HOH A 29 429 115 HOH HOH . 
F 6 HOH A 30 430 30 HOH HOH . 
F 6 HOH A 31 431 101 HOH HOH . 
F 6 HOH A 32 432 204 HOH HOH . 
F 6 HOH A 33 433 23 HOH HOH . 
F 6 HOH A 34 434 53 HOH HOH . 
F 6 HOH A 35 435 138 HOH HOH . 
F 6 HOH A 36 436 79 HOH HOH . 
F 6 HOH A 37 437 10 HOH HOH . 
F 6 HOH A 38 438 174 HOH HOH . 
F 6 HOH A 39 439 207 HOH HOH . 
F 6 HOH A 40 440 5 HOH HOH . 
F 6 HOH A 41 441 24 HOH HOH . 
F 6 HOH A 42 442 11 HOH HOH . 
F 6 HOH A 43 443 9 HOH HOH . 
F 6 HOH A 44 444 61 HOH HOH . 
F 6 HOH A 45 445 34 HOH HOH . 
F 6 HOH A 46 446 14 HOH HOH . 
F 6 HOH A 47 447 78 HOH HOH . 
F 6 HOH A 48 448 29 HOH HOH . 
F 6 HOH A 49 449 2 HOH HOH . 
F 6 HOH A 50 450 18 HOH HOH . 
F 6 HOH A 51 451 66 HOH HOH . 
F 6 HOH A 52 452 15 HOH HOH . 
F 6 HOH A 53 453 4 HOH HOH . 
F 6 HOH A 54 454 3 HOH HOH . 
F 6 HOH A 55 455 57 HOH HOH . 
F 6 HOH A 56 456 22 HOH HOH . 
F 6 HOH A 57 457 168 HOH HOH . 
F 6 HOH A 58 458 80 HOH HOH . 
F 6 HOH A 59 459 35 HOH HOH . 
F 6 HOH A 60 460 159 HOH HOH . 
F 6 HOH A 61 461 46 HOH HOH . 
F 6 HOH A 62 462 60 HOH HOH . 
F 6 HOH A 63 463 37 HOH HOH . 
F 6 HOH A 64 464 6 HOH HOH . 
F 6 HOH A 65 465 102 HOH HOH . 
F 6 HOH A 66 466 107 HOH HOH . 
F 6 HOH A 67 467 7 HOH HOH . 
F 6 HOH A 68 468 105 HOH HOH . 
F 6 HOH A 69 469 20 HOH HOH . 
F 6 HOH A 70 470 162 HOH HOH . 
F 6 HOH A 71 471 114 HOH HOH . 
F 6 HOH A 72 472 93 HOH HOH . 
F 6 HOH A 73 473 33 HOH HOH . 
F 6 HOH A 74 474 43 HOH HOH . 
F 6 HOH A 75 475 218 HOH HOH . 
F 6 HOH A 76 476 39 HOH HOH . 
F 6 HOH A 77 477 86 HOH HOH . 
F 6 HOH A 78 478 98 HOH HOH . 
F 6 HOH A 79 479 160 HOH HOH . 
F 6 HOH A 80 480 62 HOH HOH . 
F 6 HOH A 81 481 91 HOH HOH . 
F 6 HOH A 82 482 64 HOH HOH . 
F 6 HOH A 83 483 1 HOH HOH . 
F 6 HOH A 84 484 27 HOH HOH . 
F 6 HOH A 85 485 32 HOH HOH . 
F 6 HOH A 86 486 12 HOH HOH . 
F 6 HOH A 87 487 28 HOH HOH . 
F 6 HOH A 88 488 122 HOH HOH . 
F 6 HOH A 89 489 209 HOH HOH . 
F 6 HOH A 90 490 17 HOH HOH . 
F 6 HOH A 91 491 171 HOH HOH . 
F 6 HOH A 92 492 208 HOH HOH . 
F 6 HOH A 93 493 13 HOH HOH . 
F 6 HOH A 94 494 54 HOH HOH . 
F 6 HOH A 95 495 8 HOH HOH . 
F 6 HOH A 96 496 73 HOH HOH . 
F 6 HOH A 97 497 71 HOH HOH . 
F 6 HOH A 98 498 123 HOH HOH . 
F 6 HOH A 99 499 36 HOH HOH . 
F 6 HOH A 100 500 126 HOH HOH . 
F 6 HOH A 101 501 21 HOH HOH . 
F 6 HOH A 102 502 94 HOH HOH . 
F 6 HOH A 103 503 59 HOH HOH . 
F 6 HOH A 104 504 84 HOH HOH . 
F 6 HOH A 105 505 50 HOH HOH . 
F 6 HOH A 106 506 44 HOH HOH . 
F 6 HOH A 107 507 108 HOH HOH . 
F 6 HOH A 108 508 212 HOH HOH . 
F 6 HOH A 109 509 90 HOH HOH . 
F 6 HOH A 110 510 58 HOH HOH . 
F 6 HOH A 111 511 63 HOH HOH . 
F 6 HOH A 112 512 106 HOH HOH . 
F 6 HOH A 113 513 19 HOH HOH . 
F 6 HOH A 114 514 172 HOH HOH . 
F 6 HOH A 115 515 188 HOH HOH . 
F 6 HOH A 116 516 68 HOH HOH . 
F 6 HOH A 117 517 194 HOH HOH . 
F 6 HOH A 118 518 169 HOH HOH . 
F 6 HOH A 119 519 52 HOH HOH . 
F 6 HOH A 120 520 145 HOH HOH . 
F 6 HOH A 121 521 140 HOH HOH . 
F 6 HOH A 122 522 67 HOH HOH . 
F 6 HOH A 123 523 206 HOH HOH . 
F 6 HOH A 124 524 77 HOH HOH . 
F 6 HOH A 125 525 176 HOH HOH . 
F 6 HOH A 126 526 45 HOH HOH . 
F 6 HOH A 127 527 118 HOH HOH . 
F 6 HOH A 128 528 103 HOH HOH . 
F 6 HOH A 129 529 49 HOH HOH . 
F 6 HOH A 130 530 99 HOH HOH . 
F 6 HOH A 131 531 201 HOH HOH . 
F 6 HOH A 132 532 182 HOH HOH . 
F 6 HOH A 133 533 120 HOH HOH . 
F 6 HOH A 134 534 65 HOH HOH . 
F 6 HOH A 135 535 95 HOH HOH . 
F 6 HOH A 136 536 154 HOH HOH . 
F 6 HOH A 137 537 130 HOH HOH . 
F 6 HOH A 138 538 55 HOH HOH . 
F 6 HOH A 139 539 220 HOH HOH . 
F 6 HOH A 140 540 92 HOH HOH . 
F 6 HOH A 141 541 111 HOH HOH . 
F 6 HOH A 142 542 100 HOH HOH . 
F 6 HOH A 143 543 16 HOH HOH . 
F 6 HOH A 144 544 148 HOH HOH . 
F 6 HOH A 145 545 41 HOH HOH . 
F 6 HOH A 146 546 161 HOH HOH . 
F 6 HOH A 147 547 85 HOH HOH . 
F 6 HOH A 148 548 116 HOH HOH . 
F 6 HOH A 149 549 113 HOH HOH . 
F 6 HOH A 150 550 51 HOH HOH . 
F 6 HOH A 151 551 157 HOH HOH . 
F 6 HOH A 152 552 127 HOH HOH . 
F 6 HOH A 153 553 69 HOH HOH . 
F 6 HOH A 154 554 89 HOH HOH . 
F 6 HOH A 155 555 74 HOH HOH . 
F 6 HOH A 156 556 196 HOH HOH . 
F 6 HOH A 157 557 189 HOH HOH . 
F 6 HOH A 158 558 153 HOH HOH . 
F 6 HOH A 159 559 141 HOH HOH . 
F 6 HOH A 160 560 131 HOH HOH . 
F 6 HOH A 161 561 31 HOH HOH . 
F 6 HOH A 162 562 151 HOH HOH . 
F 6 HOH A 163 563 203 HOH HOH . 
F 6 HOH A 164 564 110 HOH HOH . 
F 6 HOH A 165 565 190 HOH HOH . 
F 6 HOH A 166 566 219 HOH HOH . 
F 6 HOH A 167 567 142 HOH HOH . 
F 6 HOH A 168 568 146 HOH HOH . 
F 6 HOH A 169 569 186 HOH HOH . 
F 6 HOH A 170 570 83 HOH HOH . 
F 6 HOH A 171 571 217 HOH HOH . 
F 6 HOH A 172 572 75 HOH HOH . 
F 6 HOH A 173 573 180 HOH HOH . 
F 6 HOH A 174 574 191 HOH HOH . 
F 6 HOH A 175 575 175 HOH HOH . 
F 6 HOH A 176 576 183 HOH HOH . 
F 6 HOH A 177 577 167 HOH HOH . 
F 6 HOH A 178 578 216 HOH HOH . 
F 6 HOH A 179 579 213 HOH HOH . 
F 6 HOH A 180 580 215 HOH HOH . 
F 6 HOH A 181 581 187 HOH HOH . 
F 6 HOH A 182 582 181 HOH HOH . 
F 6 HOH A 183 583 134 HOH HOH . 
F 6 HOH A 184 584 214 HOH HOH . 
F 6 HOH A 185 585 109 HOH HOH . 
F 6 HOH A 186 586 135 HOH HOH . 
F 6 HOH A 187 587 221 HOH HOH . 
F 6 HOH A 188 588 185 HOH HOH . 
F 6 HOH A 189 589 210 HOH HOH . 
F 6 HOH A 190 590 205 HOH HOH . 
F 6 HOH A 191 591 211 HOH HOH . 
F 6 HOH A 192 592 96 HOH HOH . 
F 6 HOH A 193 593 155 HOH HOH . 
F 6 HOH A 194 594 48 HOH HOH . 
F 6 HOH A 195 595 150 HOH HOH . 
F 6 HOH A 196 596 87 HOH HOH . 
F 6 HOH A 197 597 177 HOH HOH . 
F 6 HOH A 198 598 184 HOH HOH . 
F 6 HOH A 199 599 179 HOH HOH . 
F 6 HOH A 200 600 158 HOH HOH . 
F 6 HOH A 201 601 112 HOH HOH . 
F 6 HOH A 202 602 139 HOH HOH . 
F 6 HOH A 203 603 133 HOH HOH . 
F 6 HOH A 204 604 132 HOH HOH . 
F 6 HOH A 205 605 170 HOH HOH . 
F 6 HOH A 206 606 104 HOH HOH . 
F 6 HOH A 207 607 198 HOH HOH . 
F 6 HOH A 208 608 164 HOH HOH . 
F 6 HOH A 209 609 200 HOH HOH . 
F 6 HOH A 210 610 149 HOH HOH . 
F 6 HOH A 211 611 178 HOH HOH . 
F 6 HOH A 212 612 97 HOH HOH . 
F 6 HOH A 213 613 166 HOH HOH . 
F 6 HOH A 214 614 144 HOH HOH . 
F 6 HOH A 215 615 72 HOH HOH . 
F 6 HOH A 216 616 173 HOH HOH . 
F 6 HOH A 217 617 137 HOH HOH . 
F 6 HOH A 218 618 136 HOH HOH . 
F 6 HOH A 219 619 202 HOH HOH . 
F 6 HOH A 220 620 165 HOH HOH . 
F 6 HOH A 221 621 152 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 SE SE4 SFS . B . C 3 13.925 -36.381 1.757 0.45 18.9 ? SE4 SFS 302 A 1 
HETATM 2 FE FE1 SFS . B . C 3 13.323 -35.785 -0.51 0.63 18.9 ? FE1 SFS 302 A 1 
HETATM 3 FE FE2 SFS . B . C 3 11.528 -36.704 1.346 0.45 18.9 ? FE2 SFS 302 A 1 
HETATM 4 SE SE3 SFS . B . C 3 10.938 -35.256 -0.471 0.63 18.9 ? SE3 SFS 302 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           4 
#