data_7TSB # _model_server_result.job_id kVTVLDAvBbGuvZbucnRb5w _model_server_result.datetime_utc '2024-11-22 22:51:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tsb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 7TSB # _exptl.entry_id 7TSB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.247 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5,6,7,8-TETRAHYDROBIOPTERIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TSB _cell.length_a 48.759 _cell.length_b 114.195 _cell.length_c 164.459 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TSB _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -48.759 0 82.2295 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 E ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc2 A SG CYS 30 A CYS 326 1_555 E ZN ZN . A ZN 804 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc3 A SG CYS 35 A CYS 331 1_555 E ZN ZN . A ZN 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc4 A SG CYS 35 A CYS 331 1_555 E ZN ZN . A ZN 804 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc5 A SG CYS 119 A CYS 415 1_555 B FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? # _chem_comp.formula 'C9 H15 N5 O3' _chem_comp.formula_weight 241.247 _chem_comp.id H4B _chem_comp.mon_nstd_flag . _chem_comp.name 5,6,7,8-TETRAHYDROBIOPTERIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 H4B doub 135 n y N1 C8A H4B sing 136 n y C2 N2 H4B sing 137 n n C2 N3 H4B sing 138 n y N2 HN21 H4B sing 139 n n N2 HN22 H4B sing 140 n n N3 C4 H4B sing 141 n y N3 HN3 H4B sing 142 n n C4 O4 H4B doub 143 n n C4 C4A H4B sing 144 n y C4A C8A H4B doub 145 n y C4A N5 H4B sing 146 n n C8A N8 H4B sing 147 n n N5 C6 H4B sing 148 n n N5 HN5 H4B sing 149 n n N8 C7 H4B sing 150 n n N8 HN8 H4B sing 151 n n C6 C7 H4B sing 152 n n C6 C9 H4B sing 153 n n C6 H6 H4B sing 154 n n C7 H71 H4B sing 155 n n C7 H72 H4B sing 156 n n C9 O9 H4B sing 157 n n C9 C10 H4B sing 158 n n C9 H9 H4B sing 159 n n O9 HO9 H4B sing 160 n n C10 C11 H4B sing 161 n n C10 O10 H4B sing 162 n n C10 H10 H4B sing 163 n n C11 H111 H4B sing 164 n n C11 H112 H4B sing 165 n n C11 H113 H4B sing 166 n n O10 HO0 H4B sing 167 n n # _atom_sites.entry_id 7TSB _atom_sites.fract_transf_matrix[1][1] 0.020509 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008757 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006081 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 801 750 HEM HEM . C 3 H4B A 1 802 760 H4B BH4 . D 4 ACT A 1 803 860 ACT ACT . E 5 ZN A 1 804 900 ZN ZN . F 6 K9C A 1 805 800 K9C 9V7 . G 7 HOH A 1 901 108 HOH HOH . G 7 HOH A 2 902 41 HOH HOH . G 7 HOH A 3 903 57 HOH HOH . G 7 HOH A 4 904 127 HOH HOH . G 7 HOH A 5 905 67 HOH HOH . G 7 HOH A 6 906 129 HOH HOH . G 7 HOH A 7 907 33 HOH HOH . G 7 HOH A 8 908 18 HOH HOH . G 7 HOH A 9 909 71 HOH HOH . G 7 HOH A 10 910 110 HOH HOH . G 7 HOH A 11 911 105 HOH HOH . G 7 HOH A 12 912 46 HOH HOH . G 7 HOH A 13 913 30 HOH HOH . G 7 HOH A 14 914 9 HOH HOH . G 7 HOH A 15 915 111 HOH HOH . G 7 HOH A 16 916 116 HOH HOH . G 7 HOH A 17 917 83 HOH HOH . G 7 HOH A 18 918 47 HOH HOH . G 7 HOH A 19 919 119 HOH HOH . G 7 HOH A 20 920 132 HOH HOH . G 7 HOH A 21 921 20 HOH HOH . G 7 HOH A 22 922 151 HOH HOH . G 7 HOH A 23 923 134 HOH HOH . G 7 HOH A 24 924 128 HOH HOH . G 7 HOH A 25 925 12 HOH HOH . G 7 HOH A 26 926 92 HOH HOH . G 7 HOH A 27 927 28 HOH HOH . G 7 HOH A 28 928 32 HOH HOH . G 7 HOH A 29 929 40 HOH HOH . G 7 HOH A 30 930 76 HOH HOH . G 7 HOH A 31 931 72 HOH HOH . G 7 HOH A 32 932 1 HOH HOH . G 7 HOH A 33 933 7 HOH HOH . G 7 HOH A 34 934 154 HOH HOH . G 7 HOH A 35 935 45 HOH HOH . G 7 HOH A 36 936 120 HOH HOH . G 7 HOH A 37 937 6 HOH HOH . G 7 HOH A 38 938 17 HOH HOH . G 7 HOH A 39 939 3 HOH HOH . G 7 HOH A 40 940 125 HOH HOH . G 7 HOH A 41 941 31 HOH HOH . G 7 HOH A 42 942 8 HOH HOH . G 7 HOH A 43 943 98 HOH HOH . G 7 HOH A 44 944 68 HOH HOH . G 7 HOH A 45 945 131 HOH HOH . G 7 HOH A 46 946 121 HOH HOH . G 7 HOH A 47 947 23 HOH HOH . G 7 HOH A 48 948 141 HOH HOH . G 7 HOH A 49 949 117 HOH HOH . G 7 HOH A 50 950 11 HOH HOH . G 7 HOH A 51 951 139 HOH HOH . G 7 HOH A 52 952 104 HOH HOH . G 7 HOH A 53 953 48 HOH HOH . G 7 HOH A 54 954 54 HOH HOH . G 7 HOH A 55 955 107 HOH HOH . G 7 HOH A 56 956 2 HOH HOH . G 7 HOH A 57 957 29 HOH HOH . G 7 HOH A 58 958 140 HOH HOH . G 7 HOH A 59 959 78 HOH HOH . G 7 HOH A 60 960 19 HOH HOH . G 7 HOH A 61 961 21 HOH HOH . G 7 HOH A 62 962 14 HOH HOH . G 7 HOH A 63 963 55 HOH HOH . G 7 HOH A 64 964 39 HOH HOH . G 7 HOH A 65 965 42 HOH HOH . G 7 HOH A 66 966 118 HOH HOH . G 7 HOH A 67 967 61 HOH HOH . G 7 HOH A 68 968 10 HOH HOH . G 7 HOH A 69 969 81 HOH HOH . G 7 HOH A 70 970 27 HOH HOH . G 7 HOH A 71 971 59 HOH HOH . G 7 HOH A 72 972 26 HOH HOH . G 7 HOH A 73 973 82 HOH HOH . G 7 HOH A 74 974 73 HOH HOH . G 7 HOH A 75 975 91 HOH HOH . G 7 HOH A 76 976 16 HOH HOH . G 7 HOH A 77 977 137 HOH HOH . G 7 HOH A 78 978 99 HOH HOH . G 7 HOH A 79 979 152 HOH HOH . G 7 HOH A 80 980 4 HOH HOH . G 7 HOH A 81 981 24 HOH HOH . G 7 HOH A 82 982 86 HOH HOH . G 7 HOH A 83 983 5 HOH HOH . G 7 HOH A 84 984 155 HOH HOH . G 7 HOH A 85 985 138 HOH HOH . G 7 HOH A 86 986 96 HOH HOH . G 7 HOH A 87 987 64 HOH HOH . G 7 HOH A 88 988 44 HOH HOH . G 7 HOH A 89 989 89 HOH HOH . G 7 HOH A 90 990 109 HOH HOH . G 7 HOH A 91 991 123 HOH HOH . G 7 HOH A 92 992 136 HOH HOH . G 7 HOH A 93 993 85 HOH HOH . G 7 HOH A 94 994 149 HOH HOH . G 7 HOH A 95 995 51 HOH HOH . G 7 HOH A 96 996 156 HOH HOH . G 7 HOH A 97 997 37 HOH HOH . G 7 HOH A 98 998 60 HOH HOH . G 7 HOH A 99 999 87 HOH HOH . G 7 HOH A 100 1000 77 HOH HOH . G 7 HOH A 101 1001 74 HOH HOH . G 7 HOH A 102 1002 103 HOH HOH . G 7 HOH A 103 1003 38 HOH HOH . G 7 HOH A 104 1004 65 HOH HOH . G 7 HOH A 105 1005 143 HOH HOH . G 7 HOH A 106 1006 34 HOH HOH . G 7 HOH A 107 1007 95 HOH HOH . G 7 HOH A 108 1008 133 HOH HOH . G 7 HOH A 109 1009 15 HOH HOH . G 7 HOH A 110 1010 145 HOH HOH . G 7 HOH A 111 1011 58 HOH HOH . G 7 HOH A 112 1012 113 HOH HOH . G 7 HOH A 113 1013 25 HOH HOH . G 7 HOH A 114 1014 75 HOH HOH . G 7 HOH A 115 1015 114 HOH HOH . G 7 HOH A 116 1016 62 HOH HOH . G 7 HOH A 117 1017 97 HOH HOH . G 7 HOH A 118 1018 53 HOH HOH . G 7 HOH A 119 1019 49 HOH HOH . G 7 HOH A 120 1020 101 HOH HOH . G 7 HOH A 121 1021 43 HOH HOH . G 7 HOH A 122 1022 90 HOH HOH . G 7 HOH A 123 1023 35 HOH HOH . G 7 HOH A 124 1024 126 HOH HOH . G 7 HOH A 125 1025 124 HOH HOH . G 7 HOH A 126 1026 93 HOH HOH . G 7 HOH A 127 1027 150 HOH HOH . G 7 HOH A 128 1028 135 HOH HOH . G 7 HOH A 129 1029 102 HOH HOH . G 7 HOH A 130 1030 56 HOH HOH . G 7 HOH A 131 1031 36 HOH HOH . G 7 HOH A 132 1032 22 HOH HOH . G 7 HOH A 133 1033 50 HOH HOH . G 7 HOH A 134 1034 112 HOH HOH . G 7 HOH A 135 1035 122 HOH HOH . G 7 HOH A 136 1036 148 HOH HOH . G 7 HOH A 137 1037 69 HOH HOH . G 7 HOH A 138 1038 146 HOH HOH . G 7 HOH A 139 1039 70 HOH HOH . G 7 HOH A 140 1040 147 HOH HOH . G 7 HOH A 141 1041 13 HOH HOH . G 7 HOH A 142 1042 94 HOH HOH . G 7 HOH A 143 1043 88 HOH HOH . G 7 HOH A 144 1044 157 HOH HOH . G 7 HOH A 145 1045 66 HOH HOH . G 7 HOH A 146 1046 79 HOH HOH . G 7 HOH A 147 1047 63 HOH HOH . G 7 HOH A 148 1048 80 HOH HOH . G 7 HOH A 149 1049 84 HOH HOH . G 7 HOH A 150 1050 106 HOH HOH . G 7 HOH A 151 1051 130 HOH HOH . G 7 HOH A 152 1052 153 HOH HOH . G 7 HOH A 153 1053 100 HOH HOH . G 7 HOH A 154 1054 142 HOH HOH . G 7 HOH A 155 1055 52 HOH HOH . G 7 HOH A 156 1056 144 HOH HOH . G 7 HOH A 157 1057 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 H4B . . . C 3 -21.876 -3.155 33.79 1 58.31 ? N1 H4B 802 A 1 HETATM 2 C C2 H4B . . . C 3 -21.871 -2.633 32.541 1 50.33 ? C2 H4B 802 A 1 HETATM 3 N N2 H4B . . . C 3 -23.046 -2.266 31.968 1 42.93 ? N2 H4B 802 A 1 HETATM 4 N N3 H4B . . . C 3 -20.711 -2.482 31.862 1 53.3 ? N3 H4B 802 A 1 HETATM 5 C C4 H4B . . . C 3 -19.535 -2.85 32.409 1 61.12 ? C4 H4B 802 A 1 HETATM 6 O O4 H4B . . . C 3 -18.471 -2.71 31.765 1 64.67 ? O4 H4B 802 A 1 HETATM 7 C C4A H4B . . . C 3 -19.527 -3.401 33.677 1 55.38 ? C4A H4B 802 A 1 HETATM 8 C C8A H4B . . . C 3 -20.719 -3.536 34.375 1 60.19 ? C8A H4B 802 A 1 HETATM 9 N N5 H4B . . . C 3 -18.375 -3.781 34.262 1 56.64 ? N5 H4B 802 A 1 HETATM 10 N N8 H4B . . . C 3 -20.742 -4.048 35.646 1 53.53 ? N8 H4B 802 A 1 HETATM 11 C C6 H4B . . . C 3 -18.484 -4.809 35.296 1 56.88 ? C6 H4B 802 A 1 HETATM 12 C C7 H4B . . . C 3 -19.528 -4.435 36.343 1 52.94 ? C7 H4B 802 A 1 HETATM 13 C C9 H4B . . . C 3 -17.133 -5.144 35.93 1 43.91 ? C9 H4B 802 A 1 HETATM 14 O O9 H4B . . . C 3 -16.435 -3.951 36.267 1 45.76 ? O9 H4B 802 A 1 HETATM 15 C C10 H4B . . . C 3 -17.331 -5.988 37.179 1 51.02 ? C10 H4B 802 A 1 HETATM 16 C C11 H4B . . . C 3 -16.031 -6.341 37.912 1 54.31 ? C11 H4B 802 A 1 HETATM 17 O O10 H4B . . . C 3 -18.002 -7.196 36.803 1 54.48 ? O10 H4B 802 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #