data_7TSE # _model_server_result.job_id bozotwAFKeEYaJ6cwzPBxg _model_server_result.datetime_utc '2024-11-13 04:43:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tse # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":803}' # _entry.id 7TSE # _exptl.entry_id 7TSE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 241.28 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[3-(3,3-difluoroazetidin-1-yl)propyl]-4-methylpyridin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TSE _cell.length_a 49.084 _cell.length_b 114.057 _cell.length_c 164.315 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TSE _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 -49.084 0 82.1575 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 F ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc2 A SG CYS 30 A CYS 326 1_555 F ZN ZN . A ZN 805 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc3 A SG CYS 35 A CYS 331 1_555 F ZN ZN . A ZN 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc4 A SG CYS 35 A CYS 331 1_555 F ZN ZN . A ZN 805 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc5 A SG CYS 119 A CYS 415 1_555 B FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? # _chem_comp.formula 'C12 H17 F2 N3' _chem_comp.formula_weight 241.28 _chem_comp.id K8F _chem_comp.mon_nstd_flag . _chem_comp.name 6-[3-(3,3-difluoroazetidin-1-yl)propyl]-4-methylpyridin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N02 C02 K8F sing 294 n n C03 C02 K8F doub 295 n y C03 C04 K8F sing 296 n y C07 C04 K8F sing 297 n n C02 N01 K8F sing 298 n y C04 C05 K8F doub 299 n y N01 C06 K8F doub 300 n y C05 C06 K8F sing 301 n y C06 C08 K8F sing 302 n n C08 C09 K8F sing 303 n n C09 C10 K8F sing 304 n n C10 N11 K8F sing 305 n n N11 C12 K8F sing 306 n n N11 C14 K8F sing 307 n n C12 C13 K8F sing 308 n n F15 C13 K8F sing 309 n n C14 C13 K8F sing 310 n n C13 F16 K8F sing 311 n n C03 H1 K8F sing 312 n n C05 H2 K8F sing 313 n n C07 H3 K8F sing 314 n n C07 H4 K8F sing 315 n n C07 H5 K8F sing 316 n n C08 H6 K8F sing 317 n n C08 H7 K8F sing 318 n n C09 H8 K8F sing 319 n n C09 H9 K8F sing 320 n n C10 H10 K8F sing 321 n n C10 H11 K8F sing 322 n n C12 H12 K8F sing 323 n n C12 H13 K8F sing 324 n n C14 H14 K8F sing 325 n n C14 H15 K8F sing 326 n n N02 H16 K8F sing 327 n n N02 H17 K8F sing 328 n n # _atom_sites.entry_id 7TSE _atom_sites.fract_transf_matrix[1][1] 0.020373 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008768 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006086 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 801 750 HEM HEM . C 3 H4B A 1 802 760 H4B BH4 . D 4 K8F A 1 803 800 K8F 1V4 . E 5 ACT A 1 804 860 ACT ACT . F 6 ZN A 1 805 900 ZN ZN . G 7 HOH A 1 901 16 HOH HOH . G 7 HOH A 2 902 3 HOH HOH . G 7 HOH A 3 903 18 HOH HOH . G 7 HOH A 4 904 26 HOH HOH . G 7 HOH A 5 905 4 HOH HOH . G 7 HOH A 6 906 20 HOH HOH . G 7 HOH A 7 907 15 HOH HOH . G 7 HOH A 8 908 29 HOH HOH . G 7 HOH A 9 909 27 HOH HOH . G 7 HOH A 10 910 11 HOH HOH . G 7 HOH A 11 911 31 HOH HOH . G 7 HOH A 12 912 32 HOH HOH . G 7 HOH A 13 913 23 HOH HOH . G 7 HOH A 14 914 33 HOH HOH . G 7 HOH A 15 915 6 HOH HOH . G 7 HOH A 16 916 5 HOH HOH . G 7 HOH A 17 917 30 HOH HOH . G 7 HOH A 18 918 7 HOH HOH . G 7 HOH A 19 919 2 HOH HOH . G 7 HOH A 20 920 28 HOH HOH . G 7 HOH A 21 921 22 HOH HOH . G 7 HOH A 22 922 21 HOH HOH . G 7 HOH A 23 923 1 HOH HOH . G 7 HOH A 24 924 9 HOH HOH . G 7 HOH A 25 925 17 HOH HOH . G 7 HOH A 26 926 10 HOH HOH . G 7 HOH A 27 927 25 HOH HOH . G 7 HOH A 28 928 24 HOH HOH . G 7 HOH A 29 929 19 HOH HOH . G 7 HOH A 30 930 8 HOH HOH . G 7 HOH A 31 931 13 HOH HOH . G 7 HOH A 32 932 12 HOH HOH . G 7 HOH A 33 933 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 K8F . . . D 4 -25.729 0.149 23.3 1 59.41 ? C02 K8F 803 A 1 HETATM 2 C C03 K8F . . . D 4 -26.196 -0.497 22.151 1 59.82 ? C03 K8F 803 A 1 HETATM 3 C C04 K8F . . . D 4 -25.487 -1.584 21.65 1 59.84 ? C04 K8F 803 A 1 HETATM 4 C C05 K8F . . . D 4 -24.351 -2.024 22.325 1 58.52 ? C05 K8F 803 A 1 HETATM 5 C C06 K8F . . . D 4 -23.912 -1.349 23.457 1 69.06 ? C06 K8F 803 A 1 HETATM 6 C C07 K8F . . . D 4 -25.944 -2.309 20.4 1 50.78 ? C07 K8F 803 A 1 HETATM 7 C C08 K8F . . . D 4 -22.672 -1.827 24.183 1 72.21 ? C08 K8F 803 A 1 HETATM 8 C C09 K8F . . . D 4 -21.43 -1.088 23.694 1 81.11 ? C09 K8F 803 A 1 HETATM 9 C C10 K8F . . . D 4 -20.162 -1.924 23.879 1 93.53 ? C10 K8F 803 A 1 HETATM 10 C C12 K8F . . . D 4 -18.682 -2.583 25.657 1 107.95 ? C12 K8F 803 A 1 HETATM 11 C C13 K8F . . . D 4 -18.721 -4.099 25.617 1 111.37 ? C13 K8F 803 A 1 HETATM 12 C C14 K8F . . . D 4 -20.153 -4.03 25.124 1 106.89 ? C14 K8F 803 A 1 HETATM 13 F F15 K8F . . . D 4 -17.884 -4.629 24.748 1 119.46 ? F15 K8F 803 A 1 HETATM 14 F F16 K8F . . . D 4 -18.622 -4.636 26.819 1 119.28 ? F16 K8F 803 A 1 HETATM 15 N N01 K8F . . . D 4 -24.612 -0.287 23.916 1 62.81 ? N01 K8F 803 A 1 HETATM 16 N N02 K8F . . . D 4 -26.397 1.209 23.814 1 58.86 ? N02 K8F 803 A 1 HETATM 17 N N11 K8F . . . D 4 -20.082 -2.559 25.2 1 105.08 ? N11 K8F 803 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #