data_7TTA # _model_server_result.job_id Dzgh8ZY9E7ZxS83P2UFWng _model_server_result.datetime_utc '2025-07-07 19:44:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tta # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7TTA # _exptl.entry_id 7TTA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7TTA _cell.length_a 70.051 _cell.length_b 70.051 _cell.length_c 132.668 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TTA _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C FE HEM . A HEM 402 1_555 D O HOH . A HOH 508 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.808 ? metalc ? metalc2 C FE HEM . A HEM 402 1_555 D O HOH . A HOH 508 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.213 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7TTA _atom_sites.fract_transf_matrix[1][1] 0.014275 _atom_sites.fract_transf_matrix[1][2] 0.008242 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016484 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007538 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 401 401 GOL GOL . C 3 HEM A 1 402 1 HEM HEM . D 4 HOH A 1 501 48 HOH HOH . D 4 HOH A 2 502 188 HOH HOH . D 4 HOH A 3 503 46 HOH HOH . D 4 HOH A 4 504 36 HOH HOH . D 4 HOH A 5 505 190 HOH HOH . D 4 HOH A 6 506 98 HOH HOH . D 4 HOH A 7 507 218 HOH HOH . D 4 HOH A 8 508 4 HOH HOH . D 4 HOH A 9 509 93 HOH HOH . D 4 HOH A 10 510 175 HOH HOH . D 4 HOH A 11 511 77 HOH HOH . D 4 HOH A 12 512 12 HOH HOH . D 4 HOH A 13 513 137 HOH HOH . D 4 HOH A 14 514 198 HOH HOH . D 4 HOH A 15 515 226 HOH HOH . D 4 HOH A 16 516 127 HOH HOH . D 4 HOH A 17 517 89 HOH HOH . D 4 HOH A 18 518 71 HOH HOH . D 4 HOH A 19 519 21 HOH HOH . D 4 HOH A 20 520 60 HOH HOH . D 4 HOH A 21 521 32 HOH HOH . D 4 HOH A 22 522 94 HOH HOH . D 4 HOH A 23 523 72 HOH HOH . D 4 HOH A 24 524 189 HOH HOH . D 4 HOH A 25 525 86 HOH HOH . D 4 HOH A 26 526 126 HOH HOH . D 4 HOH A 27 527 185 HOH HOH . D 4 HOH A 28 528 35 HOH HOH . D 4 HOH A 29 529 216 HOH HOH . D 4 HOH A 30 530 15 HOH HOH . D 4 HOH A 31 531 44 HOH HOH . D 4 HOH A 32 532 3 HOH HOH . D 4 HOH A 33 533 100 HOH HOH . D 4 HOH A 34 534 156 HOH HOH . D 4 HOH A 35 535 81 HOH HOH . D 4 HOH A 36 536 146 HOH HOH . D 4 HOH A 37 537 26 HOH HOH . D 4 HOH A 38 538 182 HOH HOH . D 4 HOH A 39 539 117 HOH HOH . D 4 HOH A 40 540 112 HOH HOH . D 4 HOH A 41 541 61 HOH HOH . D 4 HOH A 42 542 92 HOH HOH . D 4 HOH A 43 543 120 HOH HOH . D 4 HOH A 44 544 116 HOH HOH . D 4 HOH A 45 545 22 HOH HOH . D 4 HOH A 46 546 174 HOH HOH . D 4 HOH A 47 547 201 HOH HOH . D 4 HOH A 48 548 143 HOH HOH . D 4 HOH A 49 549 33 HOH HOH . D 4 HOH A 50 550 194 HOH HOH . D 4 HOH A 51 551 78 HOH HOH . D 4 HOH A 52 552 85 HOH HOH . D 4 HOH A 53 553 128 HOH HOH . D 4 HOH A 54 554 114 HOH HOH . D 4 HOH A 55 555 20 HOH HOH . D 4 HOH A 56 556 173 HOH HOH . D 4 HOH A 57 557 58 HOH HOH . D 4 HOH A 58 558 95 HOH HOH . D 4 HOH A 59 559 19 HOH HOH . D 4 HOH A 60 560 1 HOH HOH . D 4 HOH A 61 561 17 HOH HOH . D 4 HOH A 62 562 30 HOH HOH . D 4 HOH A 63 563 158 HOH HOH . D 4 HOH A 64 564 18 HOH HOH . D 4 HOH A 65 565 195 HOH HOH . D 4 HOH A 66 566 39 HOH HOH . D 4 HOH A 67 567 139 HOH HOH . D 4 HOH A 68 568 193 HOH HOH . D 4 HOH A 69 569 176 HOH HOH . D 4 HOH A 70 570 83 HOH HOH . D 4 HOH A 71 571 209 HOH HOH . D 4 HOH A 72 572 163 HOH HOH . D 4 HOH A 73 573 41 HOH HOH . D 4 HOH A 74 574 74 HOH HOH . D 4 HOH A 75 575 196 HOH HOH . D 4 HOH A 76 576 23 HOH HOH . D 4 HOH A 77 577 107 HOH HOH . D 4 HOH A 78 578 10 HOH HOH . D 4 HOH A 79 579 16 HOH HOH . D 4 HOH A 80 580 119 HOH HOH . D 4 HOH A 81 581 231 HOH HOH . D 4 HOH A 82 582 214 HOH HOH . D 4 HOH A 83 583 5 HOH HOH . D 4 HOH A 84 584 56 HOH HOH . D 4 HOH A 85 585 24 HOH HOH . D 4 HOH A 86 586 66 HOH HOH . D 4 HOH A 87 587 141 HOH HOH . D 4 HOH A 88 588 217 HOH HOH . D 4 HOH A 89 589 28 HOH HOH . D 4 HOH A 90 590 11 HOH HOH . D 4 HOH A 91 591 29 HOH HOH . D 4 HOH A 92 592 73 HOH HOH . D 4 HOH A 93 593 37 HOH HOH . D 4 HOH A 94 594 54 HOH HOH . D 4 HOH A 95 595 144 HOH HOH . D 4 HOH A 96 596 132 HOH HOH . D 4 HOH A 97 597 67 HOH HOH . D 4 HOH A 98 598 149 HOH HOH . D 4 HOH A 99 599 25 HOH HOH . D 4 HOH A 100 600 99 HOH HOH . D 4 HOH A 101 601 14 HOH HOH . D 4 HOH A 102 602 31 HOH HOH . D 4 HOH A 103 603 8 HOH HOH . D 4 HOH A 104 604 90 HOH HOH . D 4 HOH A 105 605 222 HOH HOH . D 4 HOH A 106 606 123 HOH HOH . D 4 HOH A 107 607 43 HOH HOH . D 4 HOH A 108 608 64 HOH HOH . D 4 HOH A 109 609 169 HOH HOH . D 4 HOH A 110 610 102 HOH HOH . D 4 HOH A 111 611 105 HOH HOH . D 4 HOH A 112 612 129 HOH HOH . D 4 HOH A 113 613 152 HOH HOH . D 4 HOH A 114 614 57 HOH HOH . D 4 HOH A 115 615 124 HOH HOH . D 4 HOH A 116 616 52 HOH HOH . D 4 HOH A 117 617 108 HOH HOH . D 4 HOH A 118 618 59 HOH HOH . D 4 HOH A 119 619 79 HOH HOH . D 4 HOH A 120 620 40 HOH HOH . D 4 HOH A 121 621 70 HOH HOH . D 4 HOH A 122 622 153 HOH HOH . D 4 HOH A 123 623 172 HOH HOH . D 4 HOH A 124 624 96 HOH HOH . D 4 HOH A 125 625 9 HOH HOH . D 4 HOH A 126 626 187 HOH HOH . D 4 HOH A 127 627 63 HOH HOH . D 4 HOH A 128 628 205 HOH HOH . D 4 HOH A 129 629 47 HOH HOH . D 4 HOH A 130 630 75 HOH HOH . D 4 HOH A 131 631 50 HOH HOH . D 4 HOH A 132 632 136 HOH HOH . D 4 HOH A 133 633 184 HOH HOH . D 4 HOH A 134 634 215 HOH HOH . D 4 HOH A 135 635 104 HOH HOH . D 4 HOH A 136 636 2 HOH HOH . D 4 HOH A 137 637 197 HOH HOH . D 4 HOH A 138 638 84 HOH HOH . D 4 HOH A 139 639 51 HOH HOH . D 4 HOH A 140 640 125 HOH HOH . D 4 HOH A 141 641 121 HOH HOH . D 4 HOH A 142 642 91 HOH HOH . D 4 HOH A 143 643 204 HOH HOH . D 4 HOH A 144 644 171 HOH HOH . D 4 HOH A 145 645 13 HOH HOH . D 4 HOH A 146 646 7 HOH HOH . D 4 HOH A 147 647 111 HOH HOH . D 4 HOH A 148 648 122 HOH HOH . D 4 HOH A 149 649 225 HOH HOH . D 4 HOH A 150 650 150 HOH HOH . D 4 HOH A 151 651 101 HOH HOH . D 4 HOH A 152 652 88 HOH HOH . D 4 HOH A 153 653 6 HOH HOH . D 4 HOH A 154 654 42 HOH HOH . D 4 HOH A 155 655 68 HOH HOH . D 4 HOH A 156 656 55 HOH HOH . D 4 HOH A 157 657 200 HOH HOH . D 4 HOH A 158 658 147 HOH HOH . D 4 HOH A 159 659 134 HOH HOH . D 4 HOH A 160 660 159 HOH HOH . D 4 HOH A 161 661 27 HOH HOH . D 4 HOH A 162 662 233 HOH HOH . D 4 HOH A 163 663 166 HOH HOH . D 4 HOH A 164 664 109 HOH HOH . D 4 HOH A 165 665 76 HOH HOH . D 4 HOH A 166 666 164 HOH HOH . D 4 HOH A 167 667 142 HOH HOH . D 4 HOH A 168 668 106 HOH HOH . D 4 HOH A 169 669 180 HOH HOH . D 4 HOH A 170 670 232 HOH HOH . D 4 HOH A 171 671 38 HOH HOH . D 4 HOH A 172 672 219 HOH HOH . D 4 HOH A 173 673 53 HOH HOH . D 4 HOH A 174 674 148 HOH HOH . D 4 HOH A 175 675 170 HOH HOH . D 4 HOH A 176 676 223 HOH HOH . D 4 HOH A 177 677 199 HOH HOH . D 4 HOH A 178 678 167 HOH HOH . D 4 HOH A 179 679 103 HOH HOH . D 4 HOH A 180 680 34 HOH HOH . D 4 HOH A 181 681 133 HOH HOH . D 4 HOH A 182 682 80 HOH HOH . D 4 HOH A 183 683 213 HOH HOH . D 4 HOH A 184 684 118 HOH HOH . D 4 HOH A 185 685 210 HOH HOH . D 4 HOH A 186 686 45 HOH HOH . D 4 HOH A 187 687 145 HOH HOH . D 4 HOH A 188 688 87 HOH HOH . D 4 HOH A 189 689 113 HOH HOH . D 4 HOH A 190 690 212 HOH HOH . D 4 HOH A 191 691 69 HOH HOH . D 4 HOH A 192 692 211 HOH HOH . D 4 HOH A 193 693 131 HOH HOH . D 4 HOH A 194 694 135 HOH HOH . D 4 HOH A 195 695 82 HOH HOH . D 4 HOH A 196 696 160 HOH HOH . D 4 HOH A 197 697 115 HOH HOH . D 4 HOH A 198 698 62 HOH HOH . D 4 HOH A 199 699 151 HOH HOH . D 4 HOH A 200 700 191 HOH HOH . D 4 HOH A 201 701 183 HOH HOH . D 4 HOH A 202 702 179 HOH HOH . D 4 HOH A 203 703 165 HOH HOH . D 4 HOH A 204 704 207 HOH HOH . D 4 HOH A 205 705 154 HOH HOH . D 4 HOH A 206 706 155 HOH HOH . D 4 HOH A 207 707 157 HOH HOH . D 4 HOH A 208 708 206 HOH HOH . D 4 HOH A 209 709 228 HOH HOH . D 4 HOH A 210 710 162 HOH HOH . D 4 HOH A 211 711 220 HOH HOH . D 4 HOH A 212 712 186 HOH HOH . D 4 HOH A 213 713 177 HOH HOH . D 4 HOH A 214 714 130 HOH HOH . D 4 HOH A 215 715 140 HOH HOH . D 4 HOH A 216 716 168 HOH HOH . D 4 HOH A 217 717 178 HOH HOH . D 4 HOH A 218 718 234 HOH HOH . D 4 HOH A 219 719 192 HOH HOH . D 4 HOH A 220 720 229 HOH HOH . D 4 HOH A 221 721 203 HOH HOH . D 4 HOH A 222 722 208 HOH HOH . D 4 HOH A 223 723 110 HOH HOH . D 4 HOH A 224 724 161 HOH HOH . D 4 HOH A 225 725 230 HOH HOH . D 4 HOH A 226 726 138 HOH HOH . D 4 HOH A 227 727 97 HOH HOH . D 4 HOH A 228 728 65 HOH HOH . D 4 HOH A 229 729 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 38.727 15.418 51.418 1 76.49 ? C1 GOL 401 A 1 HETATM 2 O O1 GOL . . . B 2 37.709 16.015 50.651 1 74.02 ? O1 GOL 401 A 1 HETATM 3 C C2 GOL . . . B 2 38.201 14.142 52.059 1 65.56 ? C2 GOL 401 A 1 HETATM 4 O O2 GOL . . . B 2 38.777 13.955 53.332 1 49.75 ? O2 GOL 401 A 1 HETATM 5 C C3 GOL . . . B 2 36.687 14.227 52.178 1 39.99 ? C3 GOL 401 A 1 HETATM 6 O O3 GOL . . . B 2 36.092 14.016 50.921 1 75.24 ? O3 GOL 401 A 1 HETATM 7 H H11 GOL . . . B 2 39.059 16.11 52.192 1 91.79 ? H11 GOL 401 A 1 HETATM 8 H H12 GOL . . . B 2 39.581 15.186 50.781 1 91.79 ? H12 GOL 401 A 1 HETATM 9 H HO1 GOL . . . B 2 38.028 16.87 50.293 1 88.82 ? HO1 GOL 401 A 1 HETATM 10 H H2 GOL . . . B 2 38.452 13.3 51.414 1 78.67 ? H2 GOL 401 A 1 HETATM 11 H HO2 GOL . . . B 2 38.533 14.705 53.915 1 59.7 ? HO2 GOL 401 A 1 HETATM 12 H H31 GOL . . . B 2 36.403 15.209 52.557 1 47.98 ? H31 GOL 401 A 1 HETATM 13 H H32 GOL . . . B 2 36.331 13.476 52.884 1 47.98 ? H32 GOL 401 A 1 HETATM 14 H HO3 GOL . . . B 2 35.154 13.757 51.043 1 90.29 ? HO3 GOL 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 14 #