data_7TTD
#
_model_server_result.job_id            XMQKpSKZdxvWQbuHETLsLA 
_model_server_result.datetime_utc      '2025-01-25 11:08:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ttd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":501}' 
#
_entry.id    7TTD 
#
_exptl.entry_id    7TTD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7TTD 
_cell.length_a            65.795 
_cell.length_b            127.211 
_cell.length_c            250.461 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7TTD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 K N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 K O3G GTP . C GTP 501 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
metalc ? metalc2 K O2B GTP . C GTP 501 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc3 L MG MG . C MG 502 1_555 S O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? 
metalc ? metalc4 L MG MG . C MG 502 1_555 S O HOH . C HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? 
metalc ? metalc5 L MG MG . C MG 502 1_555 S O HOH . C HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc6 L MG MG . C MG 502 1_555 S O HOH . C HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 174 n n 
PG O2G GTP sing 175 n n 
PG O3G GTP sing 176 n n 
PG O3B GTP sing 177 n n 
O2G HOG2 GTP sing 178 n n 
O3G HOG3 GTP sing 179 n n 
O3B PB GTP sing 180 n n 
PB O1B GTP doub 181 n n 
PB O2B GTP sing 182 n n 
PB O3A GTP sing 183 n n 
O2B HOB2 GTP sing 184 n n 
O3A PA GTP sing 185 n n 
PA O1A GTP doub 186 n n 
PA O2A GTP sing 187 n n 
PA O5' GTP sing 188 n n 
O2A HOA2 GTP sing 189 n n 
O5' C5' GTP sing 190 n n 
C5' C4' GTP sing 191 n n 
C5' H5' GTP sing 192 n n 
C5' "H5''" GTP sing 193 n n 
C4' O4' GTP sing 194 n n 
C4' C3' GTP sing 195 n n 
C4' H4' GTP sing 196 n n 
O4' C1' GTP sing 197 n n 
C3' O3' GTP sing 198 n n 
C3' C2' GTP sing 199 n n 
C3' H3' GTP sing 200 n n 
O3' HO3' GTP sing 201 n n 
C2' O2' GTP sing 202 n n 
C2' C1' GTP sing 203 n n 
C2' H2' GTP sing 204 n n 
O2' HO2' GTP sing 205 n n 
C1' N9 GTP sing 206 n n 
C1' H1' GTP sing 207 n n 
N9 C8 GTP sing 208 n y 
N9 C4 GTP sing 209 n y 
C8 N7 GTP doub 210 n y 
C8 H8 GTP sing 211 n n 
N7 C5 GTP sing 212 n y 
C5 C6 GTP sing 213 n n 
C5 C4 GTP doub 214 n y 
C6 O6 GTP doub 215 n n 
C6 N1 GTP sing 216 n n 
N1 C2 GTP sing 217 n n 
N1 HN1 GTP sing 218 n n 
C2 N2 GTP sing 219 n n 
C2 N3 GTP doub 220 n n 
N2 HN21 GTP sing 221 n n 
N2 HN22 GTP sing 222 n n 
N3 C4 GTP sing 223 n n 
#
_atom_sites.entry_id                     7TTD 
_atom_sites.fract_transf_matrix[1][1]    0.015199 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007861 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003993 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 4 GTP A 1 501 501 GTP GTP . 
G 5 SO4 A 1 502 2 SO4 SO4 . 
H 6 GDP B 1 501 501 GDP GDP . 
I 7 JUL B 1 502 502 JUL X23 . 
J 5 SO4 B 1 503 3 SO4 SO4 . 
K 4 GTP C 1 501 501 GTP GTP . 
L 8 MG C 1 502 502 MG MG . 
M 4 GTP D 1 501 501 GTP GTP . 
N 7 JUL D 1 502 502 JUL X23 . 
O 5 SO4 D 1 503 1 SO4 SO4 . 
P 5 SO4 D 1 504 4 SO4 SO4 . 
Q 9 HOH A 1 601 33 HOH HOH . 
Q 9 HOH A 2 602 31 HOH HOH . 
Q 9 HOH A 3 603 10 HOH HOH . 
Q 9 HOH A 4 604 42 HOH HOH . 
Q 9 HOH A 5 605 63 HOH HOH . 
Q 9 HOH A 6 606 25 HOH HOH . 
Q 9 HOH A 7 607 24 HOH HOH . 
Q 9 HOH A 8 608 129 HOH HOH . 
Q 9 HOH A 9 609 65 HOH HOH . 
Q 9 HOH A 10 610 6 HOH HOH . 
Q 9 HOH A 11 611 68 HOH HOH . 
Q 9 HOH A 12 612 47 HOH HOH . 
Q 9 HOH A 13 613 37 HOH HOH . 
Q 9 HOH A 14 614 57 HOH HOH . 
Q 9 HOH A 15 615 121 HOH HOH . 
Q 9 HOH A 16 616 34 HOH HOH . 
Q 9 HOH A 17 617 43 HOH HOH . 
Q 9 HOH A 18 618 32 HOH HOH . 
Q 9 HOH A 19 619 130 HOH HOH . 
Q 9 HOH A 20 620 30 HOH HOH . 
Q 9 HOH A 21 621 39 HOH HOH . 
Q 9 HOH A 22 622 62 HOH HOH . 
Q 9 HOH A 23 623 56 HOH HOH . 
Q 9 HOH A 24 624 16 HOH HOH . 
Q 9 HOH A 25 625 29 HOH HOH . 
Q 9 HOH A 26 626 53 HOH HOH . 
Q 9 HOH A 27 627 45 HOH HOH . 
Q 9 HOH A 28 628 11 HOH HOH . 
Q 9 HOH A 29 629 59 HOH HOH . 
Q 9 HOH A 30 630 64 HOH HOH . 
Q 9 HOH A 31 631 60 HOH HOH . 
Q 9 HOH A 32 632 26 HOH HOH . 
Q 9 HOH A 33 633 41 HOH HOH . 
Q 9 HOH A 34 634 58 HOH HOH . 
Q 9 HOH A 35 635 124 HOH HOH . 
Q 9 HOH A 36 636 38 HOH HOH . 
Q 9 HOH A 37 637 44 HOH HOH . 
Q 9 HOH A 38 638 54 HOH HOH . 
Q 9 HOH A 39 639 48 HOH HOH . 
Q 9 HOH A 40 640 46 HOH HOH . 
R 9 HOH B 1 601 74 HOH HOH . 
R 9 HOH B 2 602 134 HOH HOH . 
R 9 HOH B 3 603 70 HOH HOH . 
R 9 HOH B 4 604 20 HOH HOH . 
R 9 HOH B 5 605 78 HOH HOH . 
R 9 HOH B 6 606 73 HOH HOH . 
R 9 HOH B 7 607 72 HOH HOH . 
R 9 HOH B 8 608 69 HOH HOH . 
R 9 HOH B 9 609 132 HOH HOH . 
R 9 HOH B 10 610 14 HOH HOH . 
R 9 HOH B 11 611 133 HOH HOH . 
R 9 HOH B 12 612 7 HOH HOH . 
R 9 HOH B 13 613 138 HOH HOH . 
R 9 HOH B 14 614 15 HOH HOH . 
R 9 HOH B 15 615 4 HOH HOH . 
R 9 HOH B 16 616 2 HOH HOH . 
R 9 HOH B 17 617 76 HOH HOH . 
R 9 HOH B 18 618 75 HOH HOH . 
R 9 HOH B 19 619 13 HOH HOH . 
R 9 HOH B 20 620 137 HOH HOH . 
R 9 HOH B 21 621 139 HOH HOH . 
R 9 HOH B 22 622 136 HOH HOH . 
R 9 HOH B 23 623 71 HOH HOH . 
R 9 HOH B 24 624 77 HOH HOH . 
R 9 HOH B 25 625 135 HOH HOH . 
R 9 HOH B 26 626 125 HOH HOH . 
S 9 HOH C 1 601 92 HOH HOH . 
S 9 HOH C 2 602 90 HOH HOH . 
S 9 HOH C 3 603 79 HOH HOH . 
S 9 HOH C 4 604 23 HOH HOH . 
S 9 HOH C 5 605 83 HOH HOH . 
S 9 HOH C 6 606 18 HOH HOH . 
S 9 HOH C 7 607 22 HOH HOH . 
S 9 HOH C 8 608 84 HOH HOH . 
S 9 HOH C 9 609 148 HOH HOH . 
S 9 HOH C 10 610 145 HOH HOH . 
S 9 HOH C 11 611 5 HOH HOH . 
S 9 HOH C 12 612 88 HOH HOH . 
S 9 HOH C 13 613 94 HOH HOH . 
S 9 HOH C 14 614 141 HOH HOH . 
S 9 HOH C 15 615 89 HOH HOH . 
S 9 HOH C 16 616 144 HOH HOH . 
S 9 HOH C 17 617 21 HOH HOH . 
S 9 HOH C 18 618 147 HOH HOH . 
S 9 HOH C 19 619 146 HOH HOH . 
S 9 HOH C 20 620 85 HOH HOH . 
S 9 HOH C 21 621 87 HOH HOH . 
S 9 HOH C 22 622 82 HOH HOH . 
S 9 HOH C 23 623 143 HOH HOH . 
S 9 HOH C 24 624 86 HOH HOH . 
S 9 HOH C 25 625 93 HOH HOH . 
S 9 HOH C 26 626 142 HOH HOH . 
S 9 HOH C 27 627 140 HOH HOH . 
S 9 HOH C 28 628 126 HOH HOH . 
T 9 HOH D 1 601 106 HOH HOH . 
T 9 HOH D 2 602 96 HOH HOH . 
T 9 HOH D 3 603 95 HOH HOH . 
T 9 HOH D 4 604 52 HOH HOH . 
T 9 HOH D 5 605 91 HOH HOH . 
T 9 HOH D 6 606 105 HOH HOH . 
T 9 HOH D 7 607 50 HOH HOH . 
T 9 HOH D 8 608 128 HOH HOH . 
T 9 HOH D 9 609 108 HOH HOH . 
T 9 HOH D 10 610 51 HOH HOH . 
T 9 HOH D 11 611 107 HOH HOH . 
T 9 HOH D 12 612 17 HOH HOH . 
T 9 HOH D 13 613 12 HOH HOH . 
T 9 HOH D 14 614 116 HOH HOH . 
T 9 HOH D 15 615 111 HOH HOH . 
T 9 HOH D 16 616 9 HOH HOH . 
T 9 HOH D 17 617 8 HOH HOH . 
T 9 HOH D 18 618 104 HOH HOH . 
T 9 HOH D 19 619 19 HOH HOH . 
T 9 HOH D 20 620 109 HOH HOH . 
T 9 HOH D 21 621 1 HOH HOH . 
T 9 HOH D 22 622 118 HOH HOH . 
T 9 HOH D 23 623 100 HOH HOH . 
T 9 HOH D 24 624 127 HOH HOH . 
T 9 HOH D 25 625 112 HOH HOH . 
T 9 HOH D 26 626 117 HOH HOH . 
T 9 HOH D 27 627 149 HOH HOH . 
T 9 HOH D 28 628 99 HOH HOH . 
T 9 HOH D 29 629 150 HOH HOH . 
T 9 HOH D 30 630 97 HOH HOH . 
T 9 HOH D 31 631 102 HOH HOH . 
T 9 HOH D 32 632 103 HOH HOH . 
T 9 HOH D 33 633 98 HOH HOH . 
T 9 HOH D 34 634 119 HOH HOH . 
T 9 HOH D 35 635 113 HOH HOH . 
T 9 HOH D 36 636 101 HOH HOH . 
U 9 HOH E 1 201 55 HOH HOH . 
U 9 HOH E 2 202 120 HOH HOH . 
U 9 HOH E 3 203 131 HOH HOH . 
U 9 HOH E 4 204 110 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . M 4 46.48 92.621 10.044 1 58.72 ? PG GTP 501 D 1 
HETATM 2 O O1G GTP . . . M 4 47.469 92.376 8.958 1 51.28 ? O1G GTP 501 D 1 
HETATM 3 O O2G GTP . . . M 4 45.477 93.849 9.709 1 49.8 ? O2G GTP 501 D 1 
HETATM 4 O O3G GTP . . . M 4 47.203 92.914 11.459 1 63.87 ? O3G GTP 501 D 1 
HETATM 5 O O3B GTP . . . M 4 45.61 91.281 10.169 1 47.09 ? O3B GTP 501 D 1 
HETATM 6 P PB GTP . . . M 4 44.049 91.125 9.941 1 38.24 ? PB GTP 501 D 1 
HETATM 7 O O1B GTP . . . M 4 43.546 89.855 10.526 1 52.61 ? O1B GTP 501 D 1 
HETATM 8 O O2B GTP . . . M 4 43.241 92.337 10.585 1 34.09 ? O2B GTP 501 D 1 
HETATM 9 O O3A GTP . . . M 4 43.864 91.218 8.379 1 39.54 ? O3A GTP 501 D 1 
HETATM 10 P PA GTP . . . M 4 42.521 91.209 7.547 1 48.16 ? PA GTP 501 D 1 
HETATM 11 O O1A GTP . . . M 4 41.442 90.656 8.401 1 40.51 ? O1A GTP 501 D 1 
HETATM 12 O O2A GTP . . . M 4 42.132 92.668 7.038 1 58.27 ? O2A GTP 501 D 1 
HETATM 13 O O5' GTP . . . M 4 42.937 90.231 6.362 1 38.05 ? O5' GTP 501 D 1 
HETATM 14 C C5' GTP . . . M 4 42.954 90.667 5.008 1 33.73 ? C5' GTP 501 D 1 
HETATM 15 C C4' GTP . . . M 4 42.128 89.596 4.321 1 33.1 ? C4' GTP 501 D 1 
HETATM 16 O O4' GTP . . . M 4 40.81 89.615 4.89 1 34.14 ? O4' GTP 501 D 1 
HETATM 17 C C3' GTP . . . M 4 41.961 89.932 2.846 1 42.11 ? C3' GTP 501 D 1 
HETATM 18 O O3' GTP . . . M 4 41.724 88.688 2.212 1 38.75 ? O3' GTP 501 D 1 
HETATM 19 C C2' GTP . . . M 4 40.716 90.843 2.871 1 39.41 ? C2' GTP 501 D 1 
HETATM 20 O O2' GTP . . . M 4 39.991 90.757 1.67 1 35.48 ? O2' GTP 501 D 1 
HETATM 21 C C1' GTP . . . M 4 39.866 90.097 3.913 1 40.07 ? C1' GTP 501 D 1 
HETATM 22 N N9 GTP . . . M 4 38.908 90.922 4.641 1 37.02 ? N9 GTP 501 D 1 
HETATM 23 C C8 GTP . . . M 4 39.189 91.974 5.489 1 33.79 ? C8 GTP 501 D 1 
HETATM 24 N N7 GTP . . . M 4 38.059 92.417 5.99 1 33.75 ? N7 GTP 501 D 1 
HETATM 25 C C5 GTP . . . M 4 37.016 91.694 5.494 1 31.73 ? C5 GTP 501 D 1 
HETATM 26 C C6 GTP . . . M 4 35.608 91.699 5.675 1 37.87 ? C6 GTP 501 D 1 
HETATM 27 O O6 GTP . . . M 4 35.046 92.489 6.415 1 43.14 ? O6 GTP 501 D 1 
HETATM 28 N N1 GTP . . . M 4 34.855 90.778 5.022 1 33.78 ? N1 GTP 501 D 1 
HETATM 29 C C2 GTP . . . M 4 35.438 89.863 4.198 1 36.56 ? C2 GTP 501 D 1 
HETATM 30 N N2 GTP . . . M 4 34.625 88.969 3.537 1 28.82 ? N2 GTP 501 D 1 
HETATM 31 N N3 GTP . . . M 4 36.75 89.837 4.024 1 31.42 ? N3 GTP 501 D 1 
HETATM 32 C C4 GTP . . . M 4 37.556 90.716 4.639 1 28.43 ? C4 GTP 501 D 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           469 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           32 
#