data_7TTD # _model_server_result.job_id oVSFgc2VIQsHA5a0_Tdq2w _model_server_result.datetime_utc '2024-11-09 02:06:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ttd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":502}' # _entry.id 7TTD # _exptl.entry_id 7TTD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TTD _cell.length_a 65.795 _cell.length_b 127.211 _cell.length_c 250.461 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TTD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 K O3G GTP . C GTP 501 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc2 K O2B GTP . C GTP 501 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc3 L MG MG . C MG 502 1_555 S O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc4 L MG MG . C MG 502 1_555 S O HOH . C HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.896 ? metalc ? metalc5 L MG MG . C MG 502 1_555 S O HOH . C HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc6 L MG MG . C MG 502 1_555 S O HOH . C HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7TTD _atom_sites.fract_transf_matrix[1][1] 0.015199 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007861 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003993 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 GTP A 1 501 501 GTP GTP . G 5 SO4 A 1 502 2 SO4 SO4 . H 6 GDP B 1 501 501 GDP GDP . I 7 JUL B 1 502 502 JUL X23 . J 5 SO4 B 1 503 3 SO4 SO4 . K 4 GTP C 1 501 501 GTP GTP . L 8 MG C 1 502 502 MG MG . M 4 GTP D 1 501 501 GTP GTP . N 7 JUL D 1 502 502 JUL X23 . O 5 SO4 D 1 503 1 SO4 SO4 . P 5 SO4 D 1 504 4 SO4 SO4 . Q 9 HOH A 1 601 33 HOH HOH . Q 9 HOH A 2 602 31 HOH HOH . Q 9 HOH A 3 603 10 HOH HOH . Q 9 HOH A 4 604 42 HOH HOH . Q 9 HOH A 5 605 63 HOH HOH . Q 9 HOH A 6 606 25 HOH HOH . Q 9 HOH A 7 607 24 HOH HOH . Q 9 HOH A 8 608 129 HOH HOH . Q 9 HOH A 9 609 65 HOH HOH . Q 9 HOH A 10 610 6 HOH HOH . Q 9 HOH A 11 611 68 HOH HOH . Q 9 HOH A 12 612 47 HOH HOH . Q 9 HOH A 13 613 37 HOH HOH . Q 9 HOH A 14 614 57 HOH HOH . Q 9 HOH A 15 615 121 HOH HOH . Q 9 HOH A 16 616 34 HOH HOH . Q 9 HOH A 17 617 43 HOH HOH . Q 9 HOH A 18 618 32 HOH HOH . Q 9 HOH A 19 619 130 HOH HOH . Q 9 HOH A 20 620 30 HOH HOH . Q 9 HOH A 21 621 39 HOH HOH . Q 9 HOH A 22 622 62 HOH HOH . Q 9 HOH A 23 623 56 HOH HOH . Q 9 HOH A 24 624 16 HOH HOH . Q 9 HOH A 25 625 29 HOH HOH . Q 9 HOH A 26 626 53 HOH HOH . Q 9 HOH A 27 627 45 HOH HOH . Q 9 HOH A 28 628 11 HOH HOH . Q 9 HOH A 29 629 59 HOH HOH . Q 9 HOH A 30 630 64 HOH HOH . Q 9 HOH A 31 631 60 HOH HOH . Q 9 HOH A 32 632 26 HOH HOH . Q 9 HOH A 33 633 41 HOH HOH . Q 9 HOH A 34 634 58 HOH HOH . Q 9 HOH A 35 635 124 HOH HOH . Q 9 HOH A 36 636 38 HOH HOH . Q 9 HOH A 37 637 44 HOH HOH . Q 9 HOH A 38 638 54 HOH HOH . Q 9 HOH A 39 639 48 HOH HOH . Q 9 HOH A 40 640 46 HOH HOH . R 9 HOH B 1 601 74 HOH HOH . R 9 HOH B 2 602 134 HOH HOH . R 9 HOH B 3 603 70 HOH HOH . R 9 HOH B 4 604 20 HOH HOH . R 9 HOH B 5 605 78 HOH HOH . R 9 HOH B 6 606 73 HOH HOH . R 9 HOH B 7 607 72 HOH HOH . R 9 HOH B 8 608 69 HOH HOH . R 9 HOH B 9 609 132 HOH HOH . R 9 HOH B 10 610 14 HOH HOH . R 9 HOH B 11 611 133 HOH HOH . R 9 HOH B 12 612 7 HOH HOH . R 9 HOH B 13 613 138 HOH HOH . R 9 HOH B 14 614 15 HOH HOH . R 9 HOH B 15 615 4 HOH HOH . R 9 HOH B 16 616 2 HOH HOH . R 9 HOH B 17 617 76 HOH HOH . R 9 HOH B 18 618 75 HOH HOH . R 9 HOH B 19 619 13 HOH HOH . R 9 HOH B 20 620 137 HOH HOH . R 9 HOH B 21 621 139 HOH HOH . R 9 HOH B 22 622 136 HOH HOH . R 9 HOH B 23 623 71 HOH HOH . R 9 HOH B 24 624 77 HOH HOH . R 9 HOH B 25 625 135 HOH HOH . R 9 HOH B 26 626 125 HOH HOH . S 9 HOH C 1 601 92 HOH HOH . S 9 HOH C 2 602 90 HOH HOH . S 9 HOH C 3 603 79 HOH HOH . S 9 HOH C 4 604 23 HOH HOH . S 9 HOH C 5 605 83 HOH HOH . S 9 HOH C 6 606 18 HOH HOH . S 9 HOH C 7 607 22 HOH HOH . S 9 HOH C 8 608 84 HOH HOH . S 9 HOH C 9 609 148 HOH HOH . S 9 HOH C 10 610 145 HOH HOH . S 9 HOH C 11 611 5 HOH HOH . S 9 HOH C 12 612 88 HOH HOH . S 9 HOH C 13 613 94 HOH HOH . S 9 HOH C 14 614 141 HOH HOH . S 9 HOH C 15 615 89 HOH HOH . S 9 HOH C 16 616 144 HOH HOH . S 9 HOH C 17 617 21 HOH HOH . S 9 HOH C 18 618 147 HOH HOH . S 9 HOH C 19 619 146 HOH HOH . S 9 HOH C 20 620 85 HOH HOH . S 9 HOH C 21 621 87 HOH HOH . S 9 HOH C 22 622 82 HOH HOH . S 9 HOH C 23 623 143 HOH HOH . S 9 HOH C 24 624 86 HOH HOH . S 9 HOH C 25 625 93 HOH HOH . S 9 HOH C 26 626 142 HOH HOH . S 9 HOH C 27 627 140 HOH HOH . S 9 HOH C 28 628 126 HOH HOH . T 9 HOH D 1 601 106 HOH HOH . T 9 HOH D 2 602 96 HOH HOH . T 9 HOH D 3 603 95 HOH HOH . T 9 HOH D 4 604 52 HOH HOH . T 9 HOH D 5 605 91 HOH HOH . T 9 HOH D 6 606 105 HOH HOH . T 9 HOH D 7 607 50 HOH HOH . T 9 HOH D 8 608 128 HOH HOH . T 9 HOH D 9 609 108 HOH HOH . T 9 HOH D 10 610 51 HOH HOH . T 9 HOH D 11 611 107 HOH HOH . T 9 HOH D 12 612 17 HOH HOH . T 9 HOH D 13 613 12 HOH HOH . T 9 HOH D 14 614 116 HOH HOH . T 9 HOH D 15 615 111 HOH HOH . T 9 HOH D 16 616 9 HOH HOH . T 9 HOH D 17 617 8 HOH HOH . T 9 HOH D 18 618 104 HOH HOH . T 9 HOH D 19 619 19 HOH HOH . T 9 HOH D 20 620 109 HOH HOH . T 9 HOH D 21 621 1 HOH HOH . T 9 HOH D 22 622 118 HOH HOH . T 9 HOH D 23 623 100 HOH HOH . T 9 HOH D 24 624 127 HOH HOH . T 9 HOH D 25 625 112 HOH HOH . T 9 HOH D 26 626 117 HOH HOH . T 9 HOH D 27 627 149 HOH HOH . T 9 HOH D 28 628 99 HOH HOH . T 9 HOH D 29 629 150 HOH HOH . T 9 HOH D 30 630 97 HOH HOH . T 9 HOH D 31 631 102 HOH HOH . T 9 HOH D 32 632 103 HOH HOH . T 9 HOH D 33 633 98 HOH HOH . T 9 HOH D 34 634 119 HOH HOH . T 9 HOH D 35 635 113 HOH HOH . T 9 HOH D 36 636 101 HOH HOH . U 9 HOH E 1 201 55 HOH HOH . U 9 HOH E 2 202 120 HOH HOH . U 9 HOH E 3 203 131 HOH HOH . U 9 HOH E 4 204 110 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 8 _atom_site.Cartn_x 20.738 _atom_site.Cartn_y 60.848 _atom_site.Cartn_z 23.037 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #