data_7TU2 # _model_server_result.job_id mSlUWPrK41Ja7m8ZFTMHgg _model_server_result.datetime_utc '2024-10-15 11:23:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tu2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 7TU2 # _exptl.entry_id 7TU2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TU2 _cell.length_a 179.934 _cell.length_b 179.934 _cell.length_c 110.941 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TU2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+3/2 0 -1 0 -1 0 0 0 0 -1 179.934 179.934 166.4115 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 90 A HIS 68 1_555 E MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc2 A NE2 HIS 138 A HIS 116 1_555 E MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc3 A OD2 ASP 139 A ASP 117 1_555 E MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc4 A OD1 ASP 275 A ASP 253 1_555 E MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc5 E MN MN . A MN 502 1_555 J O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc6 E MN MN . A MN 502 1_555 J O HOH . A HOH 639 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc7 B NE2 HIS 90 B HIS 68 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc8 B NE2 HIS 138 B HIS 116 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc9 B OD2 ASP 139 B ASP 117 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc10 B OD1 ASP 275 B ASP 253 1_555 G MN MN . B MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc11 G MN MN . B MN 502 1_555 K O HOH . B HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc12 G MN MN . B MN 502 1_555 K O HOH . B HOH 658 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc13 C NE2 HIS 90 C HIS 68 1_555 I MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc14 C NE2 HIS 138 C HIS 116 1_555 I MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc15 C OD2 ASP 139 C ASP 117 1_555 I MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc16 C OD1 ASP 275 C ASP 253 1_555 I MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc17 I MN MN . C MN 502 1_555 L O HOH . C HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc18 I MN MN . C MN 502 1_555 L O HOH . C HOH 625 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7TU2 _atom_sites.fract_transf_matrix[1][1] 0.005558 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005558 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 A 1 501 3 SO4 SO4 . E 3 MN A 1 502 1 MN MN . F 2 SO4 B 1 501 1 SO4 SO4 . G 3 MN B 1 502 2 MN MN . H 2 SO4 C 1 501 2 SO4 SO4 . I 3 MN C 1 502 3 MN MN . J 4 HOH A 1 601 52 HOH HOH . J 4 HOH A 2 602 136 HOH HOH . J 4 HOH A 3 603 103 HOH HOH . J 4 HOH A 4 604 70 HOH HOH . J 4 HOH A 5 605 1 HOH HOH . J 4 HOH A 6 606 162 HOH HOH . J 4 HOH A 7 607 92 HOH HOH . J 4 HOH A 8 608 113 HOH HOH . J 4 HOH A 9 609 140 HOH HOH . J 4 HOH A 10 610 10 HOH HOH . J 4 HOH A 11 611 62 HOH HOH . J 4 HOH A 12 612 43 HOH HOH . J 4 HOH A 13 613 115 HOH HOH . J 4 HOH A 14 614 89 HOH HOH . J 4 HOH A 15 615 118 HOH HOH . J 4 HOH A 16 616 30 HOH HOH . J 4 HOH A 17 617 121 HOH HOH . J 4 HOH A 18 618 106 HOH HOH . J 4 HOH A 19 619 37 HOH HOH . J 4 HOH A 20 620 64 HOH HOH . J 4 HOH A 21 621 29 HOH HOH . J 4 HOH A 22 622 169 HOH HOH . J 4 HOH A 23 623 24 HOH HOH . J 4 HOH A 24 624 6 HOH HOH . J 4 HOH A 25 625 161 HOH HOH . J 4 HOH A 26 626 38 HOH HOH . J 4 HOH A 27 627 58 HOH HOH . J 4 HOH A 28 628 157 HOH HOH . J 4 HOH A 29 629 51 HOH HOH . J 4 HOH A 30 630 137 HOH HOH . J 4 HOH A 31 631 152 HOH HOH . J 4 HOH A 32 632 32 HOH HOH . J 4 HOH A 33 633 4 HOH HOH . J 4 HOH A 34 634 2 HOH HOH . J 4 HOH A 35 635 40 HOH HOH . J 4 HOH A 36 636 34 HOH HOH . J 4 HOH A 37 637 54 HOH HOH . J 4 HOH A 38 638 133 HOH HOH . J 4 HOH A 39 639 138 HOH HOH . J 4 HOH A 40 640 13 HOH HOH . J 4 HOH A 41 641 5 HOH HOH . J 4 HOH A 42 642 108 HOH HOH . J 4 HOH A 43 643 107 HOH HOH . J 4 HOH A 44 644 95 HOH HOH . J 4 HOH A 45 645 172 HOH HOH . J 4 HOH A 46 646 72 HOH HOH . J 4 HOH A 47 647 55 HOH HOH . J 4 HOH A 48 648 139 HOH HOH . J 4 HOH A 49 649 112 HOH HOH . J 4 HOH A 50 650 53 HOH HOH . J 4 HOH A 51 651 164 HOH HOH . J 4 HOH A 52 652 76 HOH HOH . J 4 HOH A 53 653 129 HOH HOH . J 4 HOH A 54 654 65 HOH HOH . J 4 HOH A 55 655 165 HOH HOH . J 4 HOH A 56 656 87 HOH HOH . J 4 HOH A 57 657 128 HOH HOH . J 4 HOH A 58 658 73 HOH HOH . J 4 HOH A 59 659 170 HOH HOH . J 4 HOH A 60 660 94 HOH HOH . J 4 HOH A 61 661 39 HOH HOH . J 4 HOH A 62 662 135 HOH HOH . J 4 HOH A 63 663 57 HOH HOH . J 4 HOH A 64 664 88 HOH HOH . J 4 HOH A 65 665 134 HOH HOH . J 4 HOH A 66 666 110 HOH HOH . J 4 HOH A 67 667 167 HOH HOH . J 4 HOH A 68 668 9 HOH HOH . J 4 HOH A 69 669 114 HOH HOH . K 4 HOH B 1 601 116 HOH HOH . K 4 HOH B 2 602 123 HOH HOH . K 4 HOH B 3 603 142 HOH HOH . K 4 HOH B 4 604 144 HOH HOH . K 4 HOH B 5 605 74 HOH HOH . K 4 HOH B 6 606 153 HOH HOH . K 4 HOH B 7 607 83 HOH HOH . K 4 HOH B 8 608 56 HOH HOH . K 4 HOH B 9 609 7 HOH HOH . K 4 HOH B 10 610 82 HOH HOH . K 4 HOH B 11 611 67 HOH HOH . K 4 HOH B 12 612 77 HOH HOH . K 4 HOH B 13 613 45 HOH HOH . K 4 HOH B 14 614 102 HOH HOH . K 4 HOH B 15 615 11 HOH HOH . K 4 HOH B 16 616 16 HOH HOH . K 4 HOH B 17 617 86 HOH HOH . K 4 HOH B 18 618 98 HOH HOH . K 4 HOH B 19 619 171 HOH HOH . K 4 HOH B 20 620 61 HOH HOH . K 4 HOH B 21 621 80 HOH HOH . K 4 HOH B 22 622 42 HOH HOH . K 4 HOH B 23 623 68 HOH HOH . K 4 HOH B 24 624 25 HOH HOH . K 4 HOH B 25 625 22 HOH HOH . K 4 HOH B 26 626 66 HOH HOH . K 4 HOH B 27 627 26 HOH HOH . K 4 HOH B 28 628 75 HOH HOH . K 4 HOH B 29 629 59 HOH HOH . K 4 HOH B 30 630 85 HOH HOH . K 4 HOH B 31 631 20 HOH HOH . K 4 HOH B 32 632 23 HOH HOH . K 4 HOH B 33 633 151 HOH HOH . K 4 HOH B 34 634 131 HOH HOH . K 4 HOH B 35 635 71 HOH HOH . K 4 HOH B 36 636 154 HOH HOH . K 4 HOH B 37 637 111 HOH HOH . K 4 HOH B 38 638 3 HOH HOH . K 4 HOH B 39 639 174 HOH HOH . K 4 HOH B 40 640 78 HOH HOH . K 4 HOH B 41 641 60 HOH HOH . K 4 HOH B 42 642 44 HOH HOH . K 4 HOH B 43 643 163 HOH HOH . K 4 HOH B 44 644 127 HOH HOH . K 4 HOH B 45 645 120 HOH HOH . K 4 HOH B 46 646 27 HOH HOH . K 4 HOH B 47 647 91 HOH HOH . K 4 HOH B 48 648 97 HOH HOH . K 4 HOH B 49 649 84 HOH HOH . K 4 HOH B 50 650 12 HOH HOH . K 4 HOH B 51 651 175 HOH HOH . K 4 HOH B 52 652 122 HOH HOH . K 4 HOH B 53 653 49 HOH HOH . K 4 HOH B 54 654 48 HOH HOH . K 4 HOH B 55 655 31 HOH HOH . K 4 HOH B 56 656 14 HOH HOH . K 4 HOH B 57 657 46 HOH HOH . K 4 HOH B 58 658 141 HOH HOH . K 4 HOH B 59 659 166 HOH HOH . K 4 HOH B 60 660 176 HOH HOH . K 4 HOH B 61 661 143 HOH HOH . K 4 HOH B 62 662 50 HOH HOH . K 4 HOH B 63 663 33 HOH HOH . K 4 HOH B 64 664 104 HOH HOH . K 4 HOH B 65 665 105 HOH HOH . K 4 HOH B 66 666 109 HOH HOH . K 4 HOH B 67 667 145 HOH HOH . K 4 HOH B 68 668 63 HOH HOH . K 4 HOH B 69 669 126 HOH HOH . K 4 HOH B 70 670 124 HOH HOH . K 4 HOH B 71 671 158 HOH HOH . K 4 HOH B 72 672 21 HOH HOH . K 4 HOH B 73 673 160 HOH HOH . K 4 HOH B 74 674 117 HOH HOH . L 4 HOH C 1 601 149 HOH HOH . L 4 HOH C 2 602 125 HOH HOH . L 4 HOH C 3 603 15 HOH HOH . L 4 HOH C 4 604 156 HOH HOH . L 4 HOH C 5 605 146 HOH HOH . L 4 HOH C 6 606 119 HOH HOH . L 4 HOH C 7 607 47 HOH HOH . L 4 HOH C 8 608 18 HOH HOH . L 4 HOH C 9 609 8 HOH HOH . L 4 HOH C 10 610 90 HOH HOH . L 4 HOH C 11 611 173 HOH HOH . L 4 HOH C 12 612 79 HOH HOH . L 4 HOH C 13 613 28 HOH HOH . L 4 HOH C 14 614 17 HOH HOH . L 4 HOH C 15 615 69 HOH HOH . L 4 HOH C 16 616 96 HOH HOH . L 4 HOH C 17 617 130 HOH HOH . L 4 HOH C 18 618 155 HOH HOH . L 4 HOH C 19 619 19 HOH HOH . L 4 HOH C 20 620 168 HOH HOH . L 4 HOH C 21 621 35 HOH HOH . L 4 HOH C 22 622 101 HOH HOH . L 4 HOH C 23 623 41 HOH HOH . L 4 HOH C 24 624 100 HOH HOH . L 4 HOH C 25 625 147 HOH HOH . L 4 HOH C 26 626 150 HOH HOH . L 4 HOH C 27 627 99 HOH HOH . L 4 HOH C 28 628 93 HOH HOH . L 4 HOH C 29 629 132 HOH HOH . L 4 HOH C 30 630 148 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x 98.257 _atom_site.Cartn_y 39.252 _atom_site.Cartn_z 69.279 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #