data_7TUF
#
_model_server_result.job_id            EYl9qGCBJUResmzMvDLpVg 
_model_server_result.datetime_utc      '2024-10-19 04:49:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7tuf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":501}' 
#
_entry.id    7TUF 
#
_exptl.entry_id    7TUF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.415 
_cell.angle_gamma         90 
_cell.entry_id            7TUF 
_cell.length_a            117.422 
_cell.length_b            68.988 
_cell.length_c            142.981 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7TUF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 D CYS 7 1_555 A SG CYS 71 D CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 295 D CYS 295 1_555 A SG CYS 362 D CYS 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf4 B SG CYS 147 H CYS 147 1_555 B SG CYS 202 H CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf5 C SG CYS 23 L CYS 23 1_555 C SG CYS 87 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf6 C SG CYS 133 L CYS 133 1_555 C SG CYS 193 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf7 D SG CYS 7 C CYS 7 1_555 D SG CYS 71 C CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf8 D SG CYS 295 C CYS 295 1_555 D SG CYS 362 C CYS 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf9 E SG CYS 22 A CYS 22 1_555 E SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf10 E SG CYS 147 A CYS 147 1_555 E SG CYS 202 A CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf11 F SG CYS 23 B CYS 23 1_555 F SG CYS 87 B CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
disulf ? disulf12 F SG CYS 133 B CYS 133 1_555 F SG CYS 193 B CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A ND2 ASN 233 D ASN 233 1_555 G C1 NAG . D NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale2 D ND2 ASN 233 C ASN 233 1_555 H C1 NAG . C NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7TUF 
_atom_sites.fract_transf_matrix[1][1]    0.008516 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002835 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014495 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007371 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 NAG D 1 501 401 NAG NAG . 
H 4 NAG C 1 501 401 NAG NAG . 
I 5 HOH D 1 601 29 HOH HOH . 
I 5 HOH D 2 602 49 HOH HOH . 
I 5 HOH D 3 603 9 HOH HOH . 
I 5 HOH D 4 604 27 HOH HOH . 
I 5 HOH D 5 605 36 HOH HOH . 
I 5 HOH D 6 606 47 HOH HOH . 
J 5 HOH H 1 301 25 HOH HOH . 
J 5 HOH H 2 302 40 HOH HOH . 
J 5 HOH H 3 303 6 HOH HOH . 
J 5 HOH H 4 304 22 HOH HOH . 
J 5 HOH H 5 305 51 HOH HOH . 
J 5 HOH H 6 306 41 HOH HOH . 
J 5 HOH H 7 307 46 HOH HOH . 
J 5 HOH H 8 308 4 HOH HOH . 
J 5 HOH H 9 309 53 HOH HOH . 
K 5 HOH L 1 301 10 HOH HOH . 
K 5 HOH L 2 302 28 HOH HOH . 
K 5 HOH L 3 303 34 HOH HOH . 
K 5 HOH L 4 304 23 HOH HOH . 
K 5 HOH L 5 305 2 HOH HOH . 
K 5 HOH L 6 306 18 HOH HOH . 
K 5 HOH L 7 307 30 HOH HOH . 
K 5 HOH L 8 308 38 HOH HOH . 
K 5 HOH L 9 309 33 HOH HOH . 
L 5 HOH C 1 601 43 HOH HOH . 
L 5 HOH C 2 602 24 HOH HOH . 
L 5 HOH C 3 603 42 HOH HOH . 
L 5 HOH C 4 604 39 HOH HOH . 
L 5 HOH C 5 605 52 HOH HOH . 
L 5 HOH C 6 606 20 HOH HOH . 
M 5 HOH A 1 301 15 HOH HOH . 
M 5 HOH A 2 302 17 HOH HOH . 
M 5 HOH A 3 303 14 HOH HOH . 
M 5 HOH A 4 304 11 HOH HOH . 
M 5 HOH A 5 305 37 HOH HOH . 
M 5 HOH A 6 306 12 HOH HOH . 
M 5 HOH A 7 307 32 HOH HOH . 
M 5 HOH A 8 308 44 HOH HOH . 
M 5 HOH A 9 309 16 HOH HOH . 
M 5 HOH A 10 310 31 HOH HOH . 
M 5 HOH A 11 311 19 HOH HOH . 
N 5 HOH B 1 301 48 HOH HOH . 
N 5 HOH B 2 302 45 HOH HOH . 
N 5 HOH B 3 303 7 HOH HOH . 
N 5 HOH B 4 304 26 HOH HOH . 
N 5 HOH B 5 305 13 HOH HOH . 
N 5 HOH B 6 306 1 HOH HOH . 
N 5 HOH B 7 307 5 HOH HOH . 
N 5 HOH B 8 308 35 HOH HOH . 
N 5 HOH B 9 309 3 HOH HOH . 
N 5 HOH B 10 310 50 HOH HOH . 
N 5 HOH B 11 311 21 HOH HOH . 
N 5 HOH B 12 312 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . H 4 21.151 47.579 54.26 1 54.26 ? C1 NAG 501 C 1 
HETATM 2 C C2 NAG . . . H 4 22.258 47.598 55.319 1 54.28 ? C2 NAG 501 C 1 
HETATM 3 C C3 NAG . . . H 4 22.489 49.028 55.808 1 69.19 ? C3 NAG 501 C 1 
HETATM 4 C C4 NAG . . . H 4 22.728 49.968 54.633 1 63.55 ? C4 NAG 501 C 1 
HETATM 5 C C5 NAG . . . H 4 21.615 49.827 53.596 1 63.35 ? C5 NAG 501 C 1 
HETATM 6 C C6 NAG . . . H 4 21.864 50.638 52.345 1 77.77 ? C6 NAG 501 C 1 
HETATM 7 C C7 NAG . . . H 4 22.839 46.208 57.26 1 88.64 ? C7 NAG 501 C 1 
HETATM 8 C C8 NAG . . . H 4 22.314 45.33 58.355 1 87.94 ? C8 NAG 501 C 1 
HETATM 9 N N2 NAG . . . H 4 21.924 46.725 56.433 1 59.04 ? N2 NAG 501 C 1 
HETATM 10 O O3 NAG . . . H 4 23.604 49.067 56.691 1 70.52 ? O3 NAG 501 C 1 
HETATM 11 O O4 NAG . . . H 4 22.77 51.313 55.096 1 65.03 ? O4 NAG 501 C 1 
HETATM 12 O O5 NAG . . . H 4 21.498 48.457 53.187 1 43.03 ? O5 NAG 501 C 1 
HETATM 13 O O6 NAG . . . H 4 22.424 49.84 51.311 1 66.2 ? O6 NAG 501 C 1 
HETATM 14 O O7 NAG . . . H 4 24.037 46.442 57.13 1 95.25 ? O7 NAG 501 C 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           356 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           14 
#