data_7TY1 # _model_server_result.job_id YomT6tu6NsE13tF1F6xnhA _model_server_result.datetime_utc '2025-04-03 14:50:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ty1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7TY1 # _exptl.entry_id 7TY1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TY1 _cell.length_a 37.33 _cell.length_b 39.27 _cell.length_c 76.02 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TY1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 23 1_555 A SG CYS 84 A CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf2 A SG CYS 38 A CYS 37 1_555 A SG CYS 97 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 56 A CYS 55 1_555 A SG CYS 112 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf4 A SG CYS 63 A CYS 62 1_555 A SG CYS 72 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 149 n n C1 C2 GOL sing 150 n n C1 H11 GOL sing 151 n n C1 H12 GOL sing 152 n n O1 HO1 GOL sing 153 n n C2 O2 GOL sing 154 n n C2 C3 GOL sing 155 n n C2 H2 GOL sing 156 n n O2 HO2 GOL sing 157 n n C3 O3 GOL sing 158 n n C3 H31 GOL sing 159 n n C3 H32 GOL sing 160 n n O3 HO3 GOL sing 161 n n # _atom_sites.entry_id 7TY1 _atom_sites.fract_transf_matrix[1][1] 0.026788 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025465 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013154 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 134 GOL GOL . C 3 CIT A 1 202 135 CIT CIT . D 3 CIT A 1 203 136 CIT CIT . E 4 PEG A 1 204 137 PEG PEG . F 2 GOL A 1 205 138 GOL GOL . G 3 CIT A 1 206 139 CIT CIT . H 3 CIT A 1 207 140 CIT CIT . I 5 HOH A 1 301 204 HOH HOH . I 5 HOH A 2 302 145 HOH HOH . I 5 HOH A 3 303 195 HOH HOH . I 5 HOH A 4 304 144 HOH HOH . I 5 HOH A 5 305 169 HOH HOH . I 5 HOH A 6 306 154 HOH HOH . I 5 HOH A 7 307 217 HOH HOH . I 5 HOH A 8 308 146 HOH HOH . I 5 HOH A 9 309 166 HOH HOH . I 5 HOH A 10 310 173 HOH HOH . I 5 HOH A 11 311 210 HOH HOH . I 5 HOH A 12 312 157 HOH HOH . I 5 HOH A 13 313 202 HOH HOH . I 5 HOH A 14 314 190 HOH HOH . I 5 HOH A 15 315 218 HOH HOH . I 5 HOH A 16 316 188 HOH HOH . I 5 HOH A 17 317 171 HOH HOH . I 5 HOH A 18 318 163 HOH HOH . I 5 HOH A 19 319 208 HOH HOH . I 5 HOH A 20 320 203 HOH HOH . I 5 HOH A 21 321 215 HOH HOH . I 5 HOH A 22 322 141 HOH HOH . I 5 HOH A 23 323 178 HOH HOH . I 5 HOH A 24 324 153 HOH HOH . I 5 HOH A 25 325 148 HOH HOH . I 5 HOH A 26 326 152 HOH HOH . I 5 HOH A 27 327 177 HOH HOH . I 5 HOH A 28 328 156 HOH HOH . I 5 HOH A 29 329 142 HOH HOH . I 5 HOH A 30 330 164 HOH HOH . I 5 HOH A 31 331 189 HOH HOH . I 5 HOH A 32 332 147 HOH HOH . I 5 HOH A 33 333 196 HOH HOH . I 5 HOH A 34 334 159 HOH HOH . I 5 HOH A 35 335 216 HOH HOH . I 5 HOH A 36 336 143 HOH HOH . I 5 HOH A 37 337 149 HOH HOH . I 5 HOH A 38 338 162 HOH HOH . I 5 HOH A 39 339 151 HOH HOH . I 5 HOH A 40 340 214 HOH HOH . I 5 HOH A 41 341 181 HOH HOH . I 5 HOH A 42 342 160 HOH HOH . I 5 HOH A 43 343 155 HOH HOH . I 5 HOH A 44 344 168 HOH HOH . I 5 HOH A 45 345 194 HOH HOH . I 5 HOH A 46 346 158 HOH HOH . I 5 HOH A 47 347 182 HOH HOH . I 5 HOH A 48 348 150 HOH HOH . I 5 HOH A 49 349 172 HOH HOH . I 5 HOH A 50 350 165 HOH HOH . I 5 HOH A 51 351 187 HOH HOH . I 5 HOH A 52 352 192 HOH HOH . I 5 HOH A 53 353 167 HOH HOH . I 5 HOH A 54 354 186 HOH HOH . I 5 HOH A 55 355 185 HOH HOH . I 5 HOH A 56 356 174 HOH HOH . I 5 HOH A 57 357 170 HOH HOH . I 5 HOH A 58 358 198 HOH HOH . I 5 HOH A 59 359 209 HOH HOH . I 5 HOH A 60 360 207 HOH HOH . I 5 HOH A 61 361 176 HOH HOH . I 5 HOH A 62 362 191 HOH HOH . I 5 HOH A 63 363 220 HOH HOH . I 5 HOH A 64 364 193 HOH HOH . I 5 HOH A 65 365 201 HOH HOH . I 5 HOH A 66 366 183 HOH HOH . I 5 HOH A 67 367 222 HOH HOH . I 5 HOH A 68 368 206 HOH HOH . I 5 HOH A 69 369 161 HOH HOH . I 5 HOH A 70 370 180 HOH HOH . I 5 HOH A 71 371 211 HOH HOH . I 5 HOH A 72 372 219 HOH HOH . I 5 HOH A 73 373 200 HOH HOH . I 5 HOH A 74 374 205 HOH HOH . I 5 HOH A 75 375 213 HOH HOH . I 5 HOH A 76 376 197 HOH HOH . I 5 HOH A 77 377 184 HOH HOH . I 5 HOH A 78 378 221 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 30.449 0.964 -24.25 1 47.54 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . B 2 30.145 -0.302 -24.82 1 55.95 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . B 2 30.545 2.071 -25.272 1 49.52 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . B 2 29.354 2.192 -26.047 1 42.6 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . B 2 30.902 3.384 -24.614 1 52.68 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . B 2 29.759 4.176 -24.354 1 45.92 ? O3 GOL 201 A 1 HETATM 7 H H11 GOL . . . B 2 29.755 1.203 -23.593 1 56.85 ? H11 GOL 201 A 1 HETATM 8 H H12 GOL . . . B 2 31.31 0.899 -23.77 1 56.85 ? H12 GOL 201 A 1 HETATM 9 H HO1 GOL . . . B 2 30.356 -0.902 -24.261 1 66.94 ? HO1 GOL 201 A 1 HETATM 10 H H2 GOL . . . B 2 31.281 1.84 -25.888 1 59.22 ? H2 GOL 201 A 1 HETATM 11 H HO2 GOL . . . B 2 29.05 2.977 -25.939 1 50.92 ? HO2 GOL 201 A 1 HETATM 12 H H31 GOL . . . B 2 31.516 3.885 -25.204 1 63.01 ? H31 GOL 201 A 1 HETATM 13 H H32 GOL . . . B 2 31.371 3.202 -23.763 1 63.01 ? H32 GOL 201 A 1 HETATM 14 H HO3 GOL . . . B 2 30 4.849 -23.902 1 54.9 ? HO3 GOL 201 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 14 #