data_7TY2 # _model_server_result.job_id 2UlTlJdO7w3Hs1I1CrEDeg _model_server_result.datetime_utc '2024-10-20 03:47:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ty2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1805}' # _entry.id 7TY2 # _exptl.entry_id 7TY2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 400.49 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1R,3S)-3-(4-acetylpiperazin-1-yl)cyclohexyl]-4-fluoro-7-methyl-1H-indole-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TY2 _cell.length_a 48.693 _cell.length_b 75.74 _cell.length_c 75.923 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TY2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 66 A CYS 1499 1_555 B ZN ZN . A ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc2 A SG CYS 68 A CYS 1501 1_555 B ZN ZN . A ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc3 A SG CYS 83 A CYS 1516 1_555 B ZN ZN . A ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc4 A SG CYS 83 A CYS 1516 1_555 C ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc5 A SG CYS 87 A CYS 1520 1_555 B ZN ZN . A ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc6 A SG CYS 96 A CYS 1529 1_555 C ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc7 A SG CYS 100 A CYS 1533 1_555 C ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc8 A SG CYS 106 A CYS 1539 1_555 C ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc9 A SG CYS 198 A CYS 1631 1_555 D ZN ZN . A ZN 1803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc10 A SG CYS 245 A CYS 1678 1_555 D ZN ZN . A ZN 1803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc11 A SG CYS 247 A CYS 1680 1_555 D ZN ZN . A ZN 1803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc12 A SG CYS 252 A CYS 1685 1_555 D ZN ZN . A ZN 1803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? # _chem_comp.formula 'C22 H29 F N4 O2' _chem_comp.formula_weight 400.49 _chem_comp.id KS6 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1R,3S)-3-(4-acetylpiperazin-1-yl)cyclohexyl]-4-fluoro-7-methyl-1H-indole-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C28 C25 KS6 sing 173 n n C25 C24 KS6 doub 174 n y C25 C26 KS6 sing 175 n y C24 C23 KS6 sing 176 n y C26 N27 KS6 sing 177 n y C26 C21 KS6 doub 178 n y N27 C19 KS6 sing 179 n y C23 C22 KS6 doub 180 n y O18 C17 KS6 doub 181 n n C21 C22 KS6 sing 182 n y C21 C20 KS6 sing 183 n y C19 C17 KS6 sing 184 n n C19 C20 KS6 doub 185 n y C22 F29 KS6 sing 186 n n C17 N16 KS6 sing 187 n n N16 C14 KS6 sing 188 n n C13 C14 KS6 sing 189 n n C13 C12 KS6 sing 190 n n C14 C15 KS6 sing 191 n n C12 C11 KS6 sing 192 n n C15 C10 KS6 sing 193 n n C11 C10 KS6 sing 194 n n C10 N7 KS6 sing 195 n n N7 C8 KS6 sing 196 n n N7 C6 KS6 sing 197 n n C8 C9 KS6 sing 198 n n C6 C5 KS6 sing 199 n n C9 N4 KS6 sing 200 n n C5 N4 KS6 sing 201 n n N4 C2 KS6 sing 202 n n C2 O3 KS6 doub 203 n n C2 C1 KS6 sing 204 n n C5 H1 KS6 sing 205 n n C5 H2 KS6 sing 206 n n C6 H3 KS6 sing 207 n n C6 H4 KS6 sing 208 n n C8 H5 KS6 sing 209 n n C8 H6 KS6 sing 210 n n C10 H7 KS6 sing 211 n n C13 H8 KS6 sing 212 n n C13 H9 KS6 sing 213 n n C15 H10 KS6 sing 214 n n C15 H11 KS6 sing 215 n n C20 H12 KS6 sing 216 n n C24 H13 KS6 sing 217 n n C28 H14 KS6 sing 218 n n C28 H15 KS6 sing 219 n n C28 H16 KS6 sing 220 n n C1 H17 KS6 sing 221 n n C1 H18 KS6 sing 222 n n C1 H19 KS6 sing 223 n n C9 H21 KS6 sing 224 n n C9 H22 KS6 sing 225 n n C11 H23 KS6 sing 226 n n C11 H24 KS6 sing 227 n n C12 H25 KS6 sing 228 n n C12 H26 KS6 sing 229 n n C14 H27 KS6 sing 230 n n N16 H28 KS6 sing 231 n n C23 H29 KS6 sing 232 n n N27 H30 KS6 sing 233 n n # _atom_sites.entry_id 7TY2 _atom_sites.fract_transf_matrix[1][1] 0.020537 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013171 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1801 1 ZN ZN . C 2 ZN A 1 1802 2 ZN ZN . D 2 ZN A 1 1803 3 ZN ZN . E 3 SAM A 1 1804 1 SAM SAM . F 4 KS6 A 1 1805 1 KS6 LIG . G 5 HOH A 1 1901 7 HOH HOH . G 5 HOH A 2 1902 3 HOH HOH . G 5 HOH A 3 1903 4 HOH HOH . G 5 HOH A 4 1904 5 HOH HOH . G 5 HOH A 5 1905 2 HOH HOH . G 5 HOH A 6 1906 1 HOH HOH . G 5 HOH A 7 1907 6 HOH HOH . G 5 HOH A 8 1908 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 KS6 . . . F 4 -18.869 12.51 13.996 1 73.81 ? C5 KS6 1805 A 1 HETATM 2 C C6 KS6 . . . F 4 -18.483 12.69 12.518 1 76.58 ? C6 KS6 1805 A 1 HETATM 3 C C8 KS6 . . . F 4 -18.844 10.38 12.054 1 72.74 ? C8 KS6 1805 A 1 HETATM 4 C C10 KS6 . . . F 4 -17.411 11.654 10.54 1 71.35 ? C10 KS6 1805 A 1 HETATM 5 C C13 KS6 . . . F 4 -15.35 11.978 8.437 1 69.19 ? C13 KS6 1805 A 1 HETATM 6 C C15 KS6 . . . F 4 -16.425 10.536 10.144 1 68.1 ? C15 KS6 1805 A 1 HETATM 7 C C17 KS6 . . . F 4 -15.23 9.1 6.944 1 59.51 ? C17 KS6 1805 A 1 HETATM 8 C C20 KS6 . . . F 4 -13.694 7.103 7.359 1 62.05 ? C20 KS6 1805 A 1 HETATM 9 C C21 KS6 . . . F 4 -12.923 6.252 6.535 1 61.7 ? C21 KS6 1805 A 1 HETATM 10 C C22 KS6 . . . F 4 -12.075 5.153 6.761 1 63.32 ? C22 KS6 1805 A 1 HETATM 11 C C24 KS6 . . . F 4 -11.679 4.975 4.395 1 62.62 ? C24 KS6 1805 A 1 HETATM 12 C C26 KS6 . . . F 4 -13.133 6.689 5.216 1 65.08 ? C26 KS6 1805 A 1 HETATM 13 C C28 KS6 . . . F 4 -12.74 6.538 2.756 1 63.58 ? C28 KS6 1805 A 1 HETATM 14 C C1 KS6 . . . F 4 -21.566 12.464 15.443 1 83.26 ? C1 KS6 1805 A 1 HETATM 15 C C2 KS6 . . . F 4 -20.903 11.267 14.774 1 82.36 ? C2 KS6 1805 A 1 HETATM 16 O O3 KS6 . . . F 4 -21.49 10.2 14.823 1 78.41 ? O3 KS6 1805 A 1 HETATM 17 N N4 KS6 . . . F 4 -19.701 11.307 14.135 1 73.65 ? N4 KS6 1805 A 1 HETATM 18 N N7 KS6 . . . F 4 -17.867 11.474 11.942 1 72.29 ? N7 KS6 1805 A 1 HETATM 19 C C9 KS6 . . . F 4 -19.133 10.092 13.526 1 72.79 ? C9 KS6 1805 A 1 HETATM 20 C C11 KS6 . . . F 4 -16.714 13.017 10.324 1 68.94 ? C11 KS6 1805 A 1 HETATM 21 C C12 KS6 . . . F 4 -16.147 13.199 8.908 1 66.25 ? C12 KS6 1805 A 1 HETATM 22 C C14 KS6 . . . F 4 -16.116 10.664 8.652 1 67.97 ? C14 KS6 1805 A 1 HETATM 23 N N16 KS6 . . . F 4 -15.259 9.556 8.217 1 65.2 ? N16 KS6 1805 A 1 HETATM 24 O O18 KS6 . . . F 4 -15.929 9.589 6.077 1 59.16 ? O18 KS6 1805 A 1 HETATM 25 C C19 KS6 . . . F 4 -14.334 8.003 6.56 1 60.45 ? C19 KS6 1805 A 1 HETATM 26 C C23 KS6 . . . F 4 -11.464 4.528 5.698 1 64.71 ? C23 KS6 1805 A 1 HETATM 27 C C25 KS6 . . . F 4 -12.505 6.045 4.156 1 62.05 ? C25 KS6 1805 A 1 HETATM 28 N N27 KS6 . . . F 4 -13.991 7.755 5.258 1 64.67 ? N27 KS6 1805 A 1 HETATM 29 F F29 KS6 . . . F 4 -11.844 4.702 8.003 1 66.19 ? F29 KS6 1805 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 575 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 29 #