data_7TY6
#
_model_server_result.job_id            d8ETN2pUHkZuHInkDXfQeA 
_model_server_result.datetime_utc      '2024-11-08 19:07:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ty6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":2204}' 
#
_entry.id    7TY6 
#
_exptl.entry_id    7TY6 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              454.52 
_entity.id                          5 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            "4,4'-Diisothiocyano-2,2'-stilbenedisulfonic acid" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7TY6 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7TY6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 N N N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   2 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   NAG 
_pdbx_entity_branch_link.comp_id_2                   NAG 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O4 
_pdbx_entity_branch_link.leaving_atom_id_2           HO4 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n C NAG 1 C 1 NAG A 2401 NAG 
2 n C NAG 2 C 2 NAG A 2402 NAG 
2 n D NAG 1 D 1 NAG B 2401 NAG 
2 n D NAG 2 D 2 NAG B 2402 NAG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 539 A LYS 539 1_555 H CAT 4DS . A 4DS 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.29 ? 
covale ? covale2 A ND2 ASN 642 A ASN 642 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
covale ? covale3 B NZ LYS 539 B LYS 539 1_555 N CAT 4DS . B 4DS 2204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.276 ? 
covale ? covale4 B ND2 ASN 642 B ASN 642 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
covale ? covale5 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
covale ? covale6 D O4 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? 
#
_chem_comp.formula           'C16 H10 N2 O6 S4' 
_chem_comp.formula_weight    454.52 
_chem_comp.id                4DS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "4,4'-Diisothiocyano-2,2'-stilbenedisulfonic acid" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAA HOA 4DS sing 1 n n 
OAA SAB 4DS sing 2 n n 
CAE SAB 4DS sing 3 n n 
SAB OAD 4DS doub 4 n n 
SAB OAC 4DS doub 5 n n 
CAJ CAE 4DS doub 6 n y 
CAE CAF 4DS sing 7 n y 
CAG CAF 4DS doub 8 n y 
CAF HAF 4DS sing 9 n n 
CAH CAG 4DS sing 10 n y 
CAG NAZ 4DS sing 11 n n 
HAH CAH 4DS sing 12 n n 
CAI CAH 4DS doub 13 n y 
HAI CAI 4DS sing 14 n n 
CAI CAJ 4DS sing 15 n y 
CAK CAJ 4DS sing 16 n n 
CAL CAK 4DS doub 17 e n 
CAK HAK 4DS sing 18 n n 
HAL CAL 4DS sing 19 n n 
CAM CAL 4DS sing 20 n n 
CAN CAM 4DS doub 21 n y 
CAM CAR 4DS sing 22 n y 
SAV CAN 4DS sing 23 n n 
CAO CAN 4DS sing 24 n y 
HAO CAO 4DS sing 25 n n 
CAO CAP 4DS doub 26 n y 
NAS CAP 4DS sing 27 n n 
CAP CAQ 4DS sing 28 n y 
CAQ CAR 4DS doub 29 n y 
CAQ HAQ 4DS sing 30 n n 
CAR HAR 4DS sing 31 n n 
CAT NAS 4DS doub 32 n n 
SAU CAT 4DS doub 33 n n 
OAX SAV 4DS doub 34 n n 
OAW SAV 4DS sing 35 n n 
SAV OAY 4DS doub 36 n n 
HOW OAW 4DS sing 37 n n 
CBA NAZ 4DS doub 38 n n 
SBB CBA 4DS doub 39 n n 
#
_atom_sites.entry_id                     7TY6 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 CLR A 1 2201 2201 CLR CLR . 
F 3 CLR A 1 2202 2204 CLR CLR . 
G 4 PC1 A 1 2203 2301 PC1 PC1 . 
H 5 4DS A 1 2204 2101 4DS HDD . 
I 3 CLR A 1 2205 2202 CLR CLR . 
J 3 CLR A 1 2206 2203 CLR CLR . 
K 3 CLR B 1 2201 2201 CLR CLR . 
L 3 CLR B 1 2202 2204 CLR CLR . 
M 4 PC1 B 1 2203 2301 PC1 PC1 . 
N 5 4DS B 1 2204 2101 4DS HDD . 
O 3 CLR B 1 2205 2202 CLR CLR . 
P 3 CLR B 1 2206 2203 CLR CLR . 
Q 6 HOH A 1 2301 12 HOH HOH . 
Q 6 HOH A 2 2302 8 HOH HOH . 
Q 6 HOH A 3 2303 2 HOH HOH . 
Q 6 HOH A 4 2304 43 HOH HOH . 
Q 6 HOH A 5 2305 59 HOH HOH . 
Q 6 HOH A 6 2306 14 HOH HOH . 
Q 6 HOH A 7 2307 30 HOH HOH . 
Q 6 HOH A 8 2308 11 HOH HOH . 
Q 6 HOH A 9 2309 4 HOH HOH . 
Q 6 HOH A 10 2310 41 HOH HOH . 
Q 6 HOH A 11 2311 25 HOH HOH . 
Q 6 HOH A 12 2312 35 HOH HOH . 
Q 6 HOH A 13 2313 46 HOH HOH . 
Q 6 HOH A 14 2314 53 HOH HOH . 
Q 6 HOH A 15 2315 33 HOH HOH . 
Q 6 HOH A 16 2316 22 HOH HOH . 
Q 6 HOH A 17 2317 21 HOH HOH . 
Q 6 HOH A 18 2318 47 HOH HOH . 
Q 6 HOH A 19 2319 64 HOH HOH . 
Q 6 HOH A 20 2320 32 HOH HOH . 
Q 6 HOH A 21 2321 48 HOH HOH . 
Q 6 HOH A 22 2322 61 HOH HOH . 
Q 6 HOH A 23 2323 6 HOH HOH . 
Q 6 HOH A 24 2324 38 HOH HOH . 
Q 6 HOH A 25 2325 19 HOH HOH . 
Q 6 HOH A 26 2326 13 HOH HOH . 
Q 6 HOH A 27 2327 16 HOH HOH . 
Q 6 HOH A 28 2328 45 HOH HOH . 
Q 6 HOH A 29 2329 39 HOH HOH . 
Q 6 HOH A 30 2330 57 HOH HOH . 
R 6 HOH B 1 2301 1 HOH HOH . 
R 6 HOH B 2 2302 15 HOH HOH . 
R 6 HOH B 3 2303 10 HOH HOH . 
R 6 HOH B 4 2304 42 HOH HOH . 
R 6 HOH B 5 2305 54 HOH HOH . 
R 6 HOH B 6 2306 50 HOH HOH . 
R 6 HOH B 7 2307 27 HOH HOH . 
R 6 HOH B 8 2308 51 HOH HOH . 
R 6 HOH B 9 2309 29 HOH HOH . 
R 6 HOH B 10 2310 62 HOH HOH . 
R 6 HOH B 11 2311 63 HOH HOH . 
R 6 HOH B 12 2312 5 HOH HOH . 
R 6 HOH B 13 2313 34 HOH HOH . 
R 6 HOH B 14 2314 24 HOH HOH . 
R 6 HOH B 15 2315 36 HOH HOH . 
R 6 HOH B 16 2316 9 HOH HOH . 
R 6 HOH B 17 2317 52 HOH HOH . 
R 6 HOH B 18 2318 40 HOH HOH . 
R 6 HOH B 19 2319 28 HOH HOH . 
R 6 HOH B 20 2320 55 HOH HOH . 
R 6 HOH B 21 2321 20 HOH HOH . 
R 6 HOH B 22 2322 17 HOH HOH . 
R 6 HOH B 23 2323 3 HOH HOH . 
R 6 HOH B 24 2324 23 HOH HOH . 
R 6 HOH B 25 2325 31 HOH HOH . 
R 6 HOH B 26 2326 49 HOH HOH . 
R 6 HOH B 27 2327 60 HOH HOH . 
R 6 HOH B 28 2328 7 HOH HOH . 
R 6 HOH B 29 2329 37 HOH HOH . 
R 6 HOH B 30 2330 26 HOH HOH . 
R 6 HOH B 31 2331 18 HOH HOH . 
R 6 HOH B 32 2332 56 HOH HOH . 
R 6 HOH B 33 2333 44 HOH HOH . 
R 6 HOH B 34 2334 58 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAA 4DS . . . N 5 197.32 205.723 174.333 1 187.49 ? OAA 4DS 2204 B 1 
HETATM 2 S SAB 4DS . . . N 5 196.956 204.222 174.367 1 188.03 ? SAB 4DS 2204 B 1 
HETATM 3 O OAC 4DS . . . N 5 195.449 204.017 174.088 1 188.61 ? OAC 4DS 2204 B 1 
HETATM 4 O OAD 4DS . . . N 5 197.786 203.462 173.473 1 184.82 ? OAD 4DS 2204 B 1 
HETATM 5 C CAE 4DS . . . N 5 197.223 203.673 176.029 1 176.28 ? CAE 4DS 2204 B 1 
HETATM 6 C CAF 4DS . . . N 5 197.607 204.6 176.996 1 172.82 ? CAF 4DS 2204 B 1 
HETATM 7 C CAG 4DS . . . N 5 197.826 204.206 178.311 1 171.06 ? CAG 4DS 2204 B 1 
HETATM 8 C CAH 4DS . . . N 5 197.654 202.871 178.653 1 171.18 ? CAH 4DS 2204 B 1 
HETATM 9 C CAI 4DS . . . N 5 197.276 201.946 177.698 1 168.44 ? CAI 4DS 2204 B 1 
HETATM 10 C CAJ 4DS . . . N 5 197.045 202.315 176.372 1 167.64 ? CAJ 4DS 2204 B 1 
HETATM 11 C CAK 4DS . . . N 5 196.63 201.227 175.404 1 162.7 ? CAK 4DS 2204 B 1 
HETATM 12 C CAL 4DS . . . N 5 197.835 200.449 174.84 1 157.25 ? CAL 4DS 2204 B 1 
HETATM 13 C CAM 4DS . . . N 5 197.455 199.119 174.227 1 153.11 ? CAM 4DS 2204 B 1 
HETATM 14 C CAN 4DS . . . N 5 197.459 197.888 174.919 1 153.95 ? CAN 4DS 2204 B 1 
HETATM 15 C CAO 4DS . . . N 5 197.097 196.709 174.27 1 151.31 ? CAO 4DS 2204 B 1 
HETATM 16 C CAP 4DS . . . N 5 196.738 196.737 172.923 1 151.32 ? CAP 4DS 2204 B 1 
HETATM 17 C CAQ 4DS . . . N 5 196.74 197.944 172.236 1 153.44 ? CAQ 4DS 2204 B 1 
HETATM 18 C CAR 4DS . . . N 5 197.093 199.108 172.881 1 153.54 ? CAR 4DS 2204 B 1 
HETATM 19 N NAS 4DS . . . N 5 196.377 195.544 172.251 1 153.67 ? NAS 4DS 2204 B 1 
HETATM 20 C CAT 4DS . . . N 5 196.588 194.327 172.723 1 146.84 ? CAT 4DS 2204 B 1 
HETATM 21 S SAU 4DS . . . N 5 198.056 193.615 172.951 1 165.41 ? SAU 4DS 2204 B 1 
HETATM 22 S SAV 4DS . . . N 5 197.911 197.8 176.627 1 157.32 ? SAV 4DS 2204 B 1 
HETATM 23 O OAW 4DS . . . N 5 196.933 198.498 177.414 1 164.28 ? OAW 4DS 2204 B 1 
HETATM 24 O OAX 4DS . . . N 5 197.957 196.301 176.983 1 158.67 ? OAX 4DS 2204 B 1 
HETATM 25 O OAY 4DS . . . N 5 199.328 198.401 176.749 1 156.25 ? OAY 4DS 2204 B 1 
HETATM 26 N NAZ 4DS . . . N 5 198.211 205.156 179.286 1 167.1 ? NAZ 4DS 2204 B 1 
HETATM 27 C CBA 4DS . . . N 5 199.01 204.982 180.32 1 165.06 ? CBA 4DS 2204 B 1 
HETATM 28 S SBB 4DS . . . N 5 200.05 204.836 181.508 1 160.58 ? SBB 4DS 2204 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           343 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           28 
#