data_7TYB # _model_server_result.job_id LzVLb8RghCGsDnMjZppICw _model_server_result.datetime_utc '2024-11-27 13:26:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tyb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 7TYB # _exptl.entry_id 7TYB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "5'-O-[(2-hydroxybenzoyl)sulfamoyl]adenosine" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.091 _cell.angle_gamma 90 _cell.entry_id 7TYB _cell.length_a 177.064 _cell.length_b 44.834 _cell.length_c 67.199 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TYB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H18 N6 O8 S' _chem_comp.formula_weight 466.425 _chem_comp.id KT0 _chem_comp.mon_nstd_flag . _chem_comp.name "5'-O-[(2-hydroxybenzoyl)sulfamoyl]adenosine" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 N23 KT0 doub 173 n y C22 N21 KT0 sing 174 n y N23 C24 KT0 sing 175 n y N21 C20 KT0 doub 176 n y C24 N25 KT0 sing 177 n n C24 C26 KT0 doub 178 n y C20 C26 KT0 sing 179 n y C20 N19 KT0 sing 180 n y C26 N27 KT0 sing 181 n y O17 C16 KT0 sing 182 n n N19 C18 KT0 sing 183 n n N19 C28 KT0 sing 184 n y C16 C18 KT0 sing 185 n n C16 C14 KT0 sing 186 n n N27 C28 KT0 doub 187 n y C18 O29 KT0 sing 188 n n O29 C13 KT0 sing 189 n n C14 O15 KT0 sing 190 n n C14 C13 KT0 sing 191 n n C13 C12 KT0 sing 192 n n C12 O11 KT0 sing 193 n n O32 C08 KT0 doub 194 n n C06 C05 KT0 doub 195 n y C06 C07 KT0 sing 196 n y O11 S10 KT0 sing 197 n n C05 C04 KT0 sing 198 n y C08 C07 KT0 sing 199 n n C08 N09 KT0 sing 200 n n C07 C02 KT0 doub 201 n y C04 C03 KT0 doub 202 n y S10 N09 KT0 sing 203 n n S10 O30 KT0 doub 204 n n S10 O31 KT0 doub 205 n n C02 C03 KT0 sing 206 n y C02 O01 KT0 sing 207 n n C13 H131 KT0 sing 208 n n C22 H221 KT0 sing 209 n n C28 H281 KT0 sing 210 n n C03 H031 KT0 sing 211 n n C04 H041 KT0 sing 212 n n C05 H051 KT0 sing 213 n n C06 H061 KT0 sing 214 n n C12 H121 KT0 sing 215 n n C12 H122 KT0 sing 216 n n C14 H141 KT0 sing 217 n n C16 H161 KT0 sing 218 n n C18 H181 KT0 sing 219 n n N09 H091 KT0 sing 220 n n N25 H252 KT0 sing 221 n n N25 H251 KT0 sing 222 n n O01 H011 KT0 sing 223 n n O15 H151 KT0 sing 224 n n O17 H171 KT0 sing 225 n n # _atom_sites.entry_id 7TYB _atom_sites.fract_transf_matrix[1][1] 0.005648 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000904 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01507 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KT0 A 1 601 601 KT0 LIG . C 3 HOH A 1 701 23 HOH HOH . C 3 HOH A 2 702 66 HOH HOH . C 3 HOH A 3 703 128 HOH HOH . C 3 HOH A 4 704 80 HOH HOH . C 3 HOH A 5 705 32 HOH HOH . C 3 HOH A 6 706 34 HOH HOH . C 3 HOH A 7 707 8 HOH HOH . C 3 HOH A 8 708 125 HOH HOH . C 3 HOH A 9 709 6 HOH HOH . C 3 HOH A 10 710 45 HOH HOH . C 3 HOH A 11 711 139 HOH HOH . C 3 HOH A 12 712 46 HOH HOH . C 3 HOH A 13 713 56 HOH HOH . C 3 HOH A 14 714 14 HOH HOH . C 3 HOH A 15 715 86 HOH HOH . C 3 HOH A 16 716 54 HOH HOH . C 3 HOH A 17 717 57 HOH HOH . C 3 HOH A 18 718 27 HOH HOH . C 3 HOH A 19 719 111 HOH HOH . C 3 HOH A 20 720 15 HOH HOH . C 3 HOH A 21 721 77 HOH HOH . C 3 HOH A 22 722 136 HOH HOH . C 3 HOH A 23 723 49 HOH HOH . C 3 HOH A 24 724 37 HOH HOH . C 3 HOH A 25 725 42 HOH HOH . C 3 HOH A 26 726 64 HOH HOH . C 3 HOH A 27 727 17 HOH HOH . C 3 HOH A 28 728 83 HOH HOH . C 3 HOH A 29 729 65 HOH HOH . C 3 HOH A 30 730 98 HOH HOH . C 3 HOH A 31 731 51 HOH HOH . C 3 HOH A 32 732 40 HOH HOH . C 3 HOH A 33 733 47 HOH HOH . C 3 HOH A 34 734 50 HOH HOH . C 3 HOH A 35 735 10 HOH HOH . C 3 HOH A 36 736 5 HOH HOH . C 3 HOH A 37 737 18 HOH HOH . C 3 HOH A 38 738 58 HOH HOH . C 3 HOH A 39 739 25 HOH HOH . C 3 HOH A 40 740 12 HOH HOH . C 3 HOH A 41 741 3 HOH HOH . C 3 HOH A 42 742 2 HOH HOH . C 3 HOH A 43 743 38 HOH HOH . C 3 HOH A 44 744 103 HOH HOH . C 3 HOH A 45 745 135 HOH HOH . C 3 HOH A 46 746 19 HOH HOH . C 3 HOH A 47 747 74 HOH HOH . C 3 HOH A 48 748 39 HOH HOH . C 3 HOH A 49 749 99 HOH HOH . C 3 HOH A 50 750 138 HOH HOH . C 3 HOH A 51 751 43 HOH HOH . C 3 HOH A 52 752 88 HOH HOH . C 3 HOH A 53 753 130 HOH HOH . C 3 HOH A 54 754 53 HOH HOH . C 3 HOH A 55 755 85 HOH HOH . C 3 HOH A 56 756 30 HOH HOH . C 3 HOH A 57 757 69 HOH HOH . C 3 HOH A 58 758 112 HOH HOH . C 3 HOH A 59 759 22 HOH HOH . C 3 HOH A 60 760 63 HOH HOH . C 3 HOH A 61 761 24 HOH HOH . C 3 HOH A 62 762 31 HOH HOH . C 3 HOH A 63 763 62 HOH HOH . C 3 HOH A 64 764 123 HOH HOH . C 3 HOH A 65 765 21 HOH HOH . C 3 HOH A 66 766 41 HOH HOH . C 3 HOH A 67 767 11 HOH HOH . C 3 HOH A 68 768 120 HOH HOH . C 3 HOH A 69 769 87 HOH HOH . C 3 HOH A 70 770 102 HOH HOH . C 3 HOH A 71 771 20 HOH HOH . C 3 HOH A 72 772 76 HOH HOH . C 3 HOH A 73 773 29 HOH HOH . C 3 HOH A 74 774 36 HOH HOH . C 3 HOH A 75 775 84 HOH HOH . C 3 HOH A 76 776 7 HOH HOH . C 3 HOH A 77 777 61 HOH HOH . C 3 HOH A 78 778 116 HOH HOH . C 3 HOH A 79 779 78 HOH HOH . C 3 HOH A 80 780 13 HOH HOH . C 3 HOH A 81 781 68 HOH HOH . C 3 HOH A 82 782 101 HOH HOH . C 3 HOH A 83 783 55 HOH HOH . C 3 HOH A 84 784 100 HOH HOH . C 3 HOH A 85 785 97 HOH HOH . C 3 HOH A 86 786 35 HOH HOH . C 3 HOH A 87 787 95 HOH HOH . C 3 HOH A 88 788 48 HOH HOH . C 3 HOH A 89 789 82 HOH HOH . C 3 HOH A 90 790 9 HOH HOH . C 3 HOH A 91 791 4 HOH HOH . C 3 HOH A 92 792 96 HOH HOH . C 3 HOH A 93 793 121 HOH HOH . C 3 HOH A 94 794 115 HOH HOH . C 3 HOH A 95 795 72 HOH HOH . C 3 HOH A 96 796 89 HOH HOH . C 3 HOH A 97 797 113 HOH HOH . C 3 HOH A 98 798 26 HOH HOH . C 3 HOH A 99 799 71 HOH HOH . C 3 HOH A 100 800 109 HOH HOH . C 3 HOH A 101 801 28 HOH HOH . C 3 HOH A 102 802 52 HOH HOH . C 3 HOH A 103 803 118 HOH HOH . C 3 HOH A 104 804 90 HOH HOH . C 3 HOH A 105 805 59 HOH HOH . C 3 HOH A 106 806 126 HOH HOH . C 3 HOH A 107 807 70 HOH HOH . C 3 HOH A 108 808 73 HOH HOH . C 3 HOH A 109 809 81 HOH HOH . C 3 HOH A 110 810 75 HOH HOH . C 3 HOH A 111 811 1 HOH HOH . C 3 HOH A 112 812 44 HOH HOH . C 3 HOH A 113 813 127 HOH HOH . C 3 HOH A 114 814 67 HOH HOH . C 3 HOH A 115 815 94 HOH HOH . C 3 HOH A 116 816 107 HOH HOH . C 3 HOH A 117 817 104 HOH HOH . C 3 HOH A 118 818 117 HOH HOH . C 3 HOH A 119 819 105 HOH HOH . C 3 HOH A 120 820 122 HOH HOH . C 3 HOH A 121 821 108 HOH HOH . C 3 HOH A 122 822 16 HOH HOH . C 3 HOH A 123 823 137 HOH HOH . C 3 HOH A 124 824 129 HOH HOH . C 3 HOH A 125 825 134 HOH HOH . C 3 HOH A 126 826 60 HOH HOH . C 3 HOH A 127 827 114 HOH HOH . C 3 HOH A 128 828 133 HOH HOH . C 3 HOH A 129 829 131 HOH HOH . C 3 HOH A 130 830 93 HOH HOH . C 3 HOH A 131 831 106 HOH HOH . C 3 HOH A 132 832 79 HOH HOH . C 3 HOH A 133 833 92 HOH HOH . C 3 HOH A 134 834 119 HOH HOH . C 3 HOH A 135 835 91 HOH HOH . C 3 HOH A 136 836 33 HOH HOH . C 3 HOH A 137 837 132 HOH HOH . C 3 HOH A 138 838 110 HOH HOH . C 3 HOH A 139 839 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 KT0 . . . B 2 67.666 12.985 4.355 1 17.31 ? C13 KT0 601 A 1 HETATM 2 C C20 KT0 . . . B 2 67.276 16.05 0.782 1 16.09 ? C20 KT0 601 A 1 HETATM 3 C C22 KT0 . . . B 2 67.22 16.282 -1.528 1 19.49 ? C22 KT0 601 A 1 HETATM 4 C C24 KT0 . . . B 2 67.464 18.192 -0.235 1 16.98 ? C24 KT0 601 A 1 HETATM 5 C C26 KT0 . . . B 2 67.426 17.396 0.938 1 15.59 ? C26 KT0 601 A 1 HETATM 6 C C28 KT0 . . . B 2 67.361 16.484 2.934 1 15.59 ? C28 KT0 601 A 1 HETATM 7 C C02 KT0 . . . B 2 67.973 18.414 8.296 1 15.59 ? C02 KT0 601 A 1 HETATM 8 C C03 KT0 . . . B 2 68.466 19.691 8.501 1 15.59 ? C03 KT0 601 A 1 HETATM 9 C C04 KT0 . . . B 2 68.193 20.663 7.552 1 18.94 ? C04 KT0 601 A 1 HETATM 10 C C05 KT0 . . . B 2 67.458 20.385 6.416 1 15.68 ? C05 KT0 601 A 1 HETATM 11 C C06 KT0 . . . B 2 66.969 19.107 6.21 1 17.5 ? C06 KT0 601 A 1 HETATM 12 C C07 KT0 . . . B 2 67.194 18.136 7.167 1 15.59 ? C07 KT0 601 A 1 HETATM 13 C C08 KT0 . . . B 2 66.613 16.739 6.925 1 15.59 ? C08 KT0 601 A 1 HETATM 14 C C12 KT0 . . . B 2 67.827 13.522 5.761 1 22.13 ? C12 KT0 601 A 1 HETATM 15 C C14 KT0 . . . B 2 68.791 13.096 3.681 1 20.72 ? C14 KT0 601 A 1 HETATM 16 C C16 KT0 . . . B 2 68.305 13.1 2.231 1 26.58 ? C16 KT0 601 A 1 HETATM 17 C C18 KT0 . . . B 2 67.068 14.056 2.279 1 15.59 ? C18 KT0 601 A 1 HETATM 18 N N09 KT0 . . . B 2 66.885 15.787 7.941 1 15.59 ? N09 KT0 601 A 1 HETATM 19 N N19 KT0 . . . B 2 67.274 15.496 2.03 1 15.59 ? N19 KT0 601 A 1 HETATM 20 N N21 KT0 . . . B 2 67.172 15.51 -0.462 1 15.59 ? N21 KT0 601 A 1 HETATM 21 N N23 KT0 . . . B 2 67.377 17.587 -1.414 1 15.59 ? N23 KT0 601 A 1 HETATM 22 N N25 KT0 . . . B 2 67.638 19.628 -0.148 1 15.59 ? N25 KT0 601 A 1 HETATM 23 N N27 KT0 . . . B 2 67.481 17.647 2.273 1 15.59 ? N27 KT0 601 A 1 HETATM 24 O O01 KT0 . . . B 2 68.214 17.42 9.246 1 15.59 ? O01 KT0 601 A 1 HETATM 25 O O11 KT0 . . . B 2 66.55 13.646 6.322 1 15.59 ? O11 KT0 601 A 1 HETATM 26 O O15 KT0 . . . B 2 69.738 11.97 3.805 1 15.59 ? O15 KT0 601 A 1 HETATM 27 O O17 KT0 . . . B 2 67.858 11.855 1.852 1 16.83 ? O17 KT0 601 A 1 HETATM 28 O O29 KT0 . . . B 2 66.61 13.864 3.477 1 17.12 ? O29 KT0 601 A 1 HETATM 29 O O30 KT0 . . . B 2 64.953 14.165 8.294 1 16.55 ? O30 KT0 601 A 1 HETATM 30 O O31 KT0 . . . B 2 67.082 13.432 8.962 1 15.59 ? O31 KT0 601 A 1 HETATM 31 O O32 KT0 . . . B 2 65.898 16.46 6.004 1 15.59 ? O32 KT0 601 A 1 HETATM 32 S S10 KT0 . . . B 2 66.372 14.16 7.863 1 15.59 ? S10 KT0 601 A 1 HETATM 33 H H131 KT0 . . . B 2 67.336 11.954 4.425 1 20.78 ? H131 KT0 601 A 1 HETATM 34 H H221 KT0 . . . B 2 67.128 15.84 -2.512 1 23.4 ? H221 KT0 601 A 1 HETATM 35 H H281 KT0 . . . B 2 67.338 16.365 4.011 1 18.72 ? H281 KT0 601 A 1 HETATM 36 H H031 KT0 . . . B 2 69.05 19.924 9.383 1 18.72 ? H031 KT0 601 A 1 HETATM 37 H H041 KT0 . . . B 2 68.567 21.669 7.705 1 22.74 ? H041 KT0 601 A 1 HETATM 38 H H051 KT0 . . . B 2 67.264 21.165 5.689 1 18.83 ? H051 KT0 601 A 1 HETATM 39 H H061 KT0 . . . B 2 66.416 18.87 5.308 1 21.02 ? H061 KT0 601 A 1 HETATM 40 H H121 KT0 . . . B 2 68.312 14.493 5.732 1 26.58 ? H121 KT0 601 A 1 HETATM 41 H H122 KT0 . . . B 2 68.423 12.832 6.352 1 26.58 ? H122 KT0 601 A 1 HETATM 42 H H141 KT0 . . . B 2 69.286 13.995 4.031 1 24.88 ? H141 KT0 601 A 1 HETATM 43 H H161 KT0 . . . B 2 69.093 13.44 1.57 1 31.91 ? H161 KT0 601 A 1 HETATM 44 H H181 KT0 . . . B 2 66.408 13.744 1.476 1 18.72 ? H181 KT0 601 A 1 HETATM 45 H H091 KT0 . . . B 2 67.404 16.084 8.744 1 18.72 ? H091 KT0 601 A 1 HETATM 46 H H252 KT0 . . . B 2 68.577 19.977 -0.211 1 18.72 ? H252 KT0 601 A 1 HETATM 47 H H251 KT0 . . . B 2 66.883 20.274 -0.031 1 18.72 ? H251 KT0 601 A 1 HETATM 48 H H011 KT0 . . . B 2 67.607 17.54 9.949 1 18.72 ? H011 KT0 601 A 1 HETATM 49 H H151 KT0 . . . B 2 69.292 11.181 3.525 1 18.72 ? H151 KT0 601 A 1 HETATM 50 H H171 KT0 . . . B 2 66.967 11.739 2.156 1 20.21 ? H171 KT0 601 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 50 #