data_7TYW # _model_server_result.job_id dIdGyCqdgEW2liGYHQdB4A _model_server_result.datetime_utc '2024-11-21 14:27:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tyw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":505}' # _entry.id 7TYW # _exptl.entry_id 7TYW _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 8 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7TYW _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TYW _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 H N N ? 8 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 E CYS 27 1_555 A SG CYS 83 E CYS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 41 E CYS 40 1_555 A SG CYS 73 E CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 58 E CYS 57 1_555 A SG CYS 105 E CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 B SG CYS 1 P CYS 1 1_555 B SG CYS 7 P CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 C SG CYS 63 R CYS 55 1_555 C SG CYS 89 R CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf6 C SG CYS 80 R CYS 72 1_555 C SG CYS 120 R CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 C SG CYS 103 R CYS 95 1_555 C SG CYS 142 R CYS 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 C SG CYS 227 R CYS 219 1_555 C SG CYS 297 R CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf9 G SG CYS 22 N CYS 22 1_555 G SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf10 G SG CYS 99 N CYS 99 1_555 G SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? covale ? covale1 B C PRO 32 P PRO 32 1_555 B N NH2 33 P NH2 33 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 C ND2 ASN 81 R ASN 73 1_555 J C1 NAG . R NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale3 C ND2 ASN 138 R ASN 130 1_555 I C1 NAG . R NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 292 n n C1 O2 PLM doub 293 n n C1 C2 PLM sing 294 n n O1 H PLM sing 295 n n C2 C3 PLM sing 296 n n C2 H21 PLM sing 297 n n C2 H22 PLM sing 298 n n C3 C4 PLM sing 299 n n C3 H31 PLM sing 300 n n C3 H32 PLM sing 301 n n C4 C5 PLM sing 302 n n C4 H41 PLM sing 303 n n C4 H42 PLM sing 304 n n C5 C6 PLM sing 305 n n C5 H51 PLM sing 306 n n C5 H52 PLM sing 307 n n C6 C7 PLM sing 308 n n C6 H61 PLM sing 309 n n C6 H62 PLM sing 310 n n C7 C8 PLM sing 311 n n C7 H71 PLM sing 312 n n C7 H72 PLM sing 313 n n C8 C9 PLM sing 314 n n C8 H81 PLM sing 315 n n C8 H82 PLM sing 316 n n C9 CA PLM sing 317 n n C9 H91 PLM sing 318 n n C9 H92 PLM sing 319 n n CA CB PLM sing 320 n n CA HA1 PLM sing 321 n n CA HA2 PLM sing 322 n n CB CC PLM sing 323 n n CB HB1 PLM sing 324 n n CB HB2 PLM sing 325 n n CC CD PLM sing 326 n n CC HC1 PLM sing 327 n n CC HC2 PLM sing 328 n n CD CE PLM sing 329 n n CD HD1 PLM sing 330 n n CD HD2 PLM sing 331 n n CE CF PLM sing 332 n n CE HE1 PLM sing 333 n n CE HE2 PLM sing 334 n n CF CG PLM sing 335 n n CF HF1 PLM sing 336 n n CF HF2 PLM sing 337 n n CG HG1 PLM sing 338 n n CG HG2 PLM sing 339 n n CG HG3 PLM sing 340 n n # _atom_sites.entry_id 7TYW _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 8 PLM E 1 201 3 PLM PLM . I 9 NAG R 1 501 609 NAG NAG . J 9 NAG R 1 502 610 NAG NAG . K 10 Y01 R 1 503 1 Y01 Y01 . L 10 Y01 R 1 504 2 Y01 Y01 . M 8 PLM R 1 505 4 PLM PLM . N 11 HOH P 1 101 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . M 8 122.401 122.615 89.589 1 52.69 ? C1 PLM 505 R 1 HETATM 2 O O1 PLM . . . M 8 122.029 123.585 90.279 1 52.69 ? O1 PLM 505 R 1 HETATM 3 O O2 PLM . . . M 8 121.663 122.025 88.775 1 52.69 ? O2 PLM 505 R 1 HETATM 4 C C2 PLM . . . M 8 123.83 122.127 89.749 1 52.69 ? C2 PLM 505 R 1 HETATM 5 C C3 PLM . . . M 8 124.641 122.89 90.749 1 52.69 ? C3 PLM 505 R 1 HETATM 6 C C4 PLM . . . M 8 126.047 122.336 90.904 1 52.69 ? C4 PLM 505 R 1 HETATM 7 C C5 PLM . . . M 8 126.884 123.05 91.937 1 52.69 ? C5 PLM 505 R 1 HETATM 8 C C6 PLM . . . M 8 128.253 122.451 92.145 1 52.69 ? C6 PLM 505 R 1 HETATM 9 C C7 PLM . . . M 8 129.063 123.119 93.229 1 52.69 ? C7 PLM 505 R 1 HETATM 10 C C8 PLM . . . M 8 128.376 123.166 94.571 1 52.69 ? C8 PLM 505 R 1 HETATM 11 C C9 PLM . . . M 8 129.237 123.687 95.695 1 52.69 ? C9 PLM 505 R 1 HETATM 12 C CA PLM . . . M 8 128.521 123.803 97.017 1 52.69 ? CA PLM 505 R 1 HETATM 13 C CB PLM . . . M 8 129.414 124.16 98.18 1 52.69 ? CB PLM 505 R 1 HETATM 14 C CC PLM . . . M 8 130.468 123.125 98.487 1 52.69 ? CC PLM 505 R 1 HETATM 15 C CD PLM . . . M 8 131.326 123.447 99.685 1 52.69 ? CD PLM 505 R 1 HETATM 16 C CE PLM . . . M 8 132.351 122.389 100.013 1 52.69 ? CE PLM 505 R 1 HETATM 17 C CF PLM . . . M 8 133.2 122.695 101.221 1 52.69 ? CF PLM 505 R 1 HETATM 18 C CG PLM . . . M 8 134.215 121.622 101.536 1 52.69 ? CG PLM 505 R 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #