data_7TZE # _model_server_result.job_id ccs9QvA36XF9Vfd_j48f8A _model_server_result.datetime_utc '2025-03-09 21:00:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7tze # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 7TZE # _exptl.entry_id 7TZE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.78 _cell.angle_gamma 90 _cell.entry_id 7TZE _cell.length_a 35.729 _cell.length_b 92.534 _cell.length_c 81.771 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TZE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 44 1_555 A SG CYS 134 A CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 163 A CYS 185 1_555 A SG CYS 213 A CYS 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 22 C CYS 44 1_555 B SG CYS 134 C CYS 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? disulf ? disulf4 B SG CYS 163 C CYS 185 1_555 B SG CYS 213 C CYS 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? covale ? covale1 A ND2 ASN 162 A ASN 184 1_555 C C1 NAG . A NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale2 A ND2 ASN 222 A ASN 244 1_555 D C1 NAG . A NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale3 B ND2 ASN 162 C ASN 184 1_555 E C1 NAG . C NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale4 B ND2 ASN 222 C ASN 244 1_555 F C1 NAG . C NAG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 246 n n C1 O1 NAG sing 247 n n C1 O5 NAG sing 248 n n C1 H1 NAG sing 249 n n C2 C3 NAG sing 250 n n C2 N2 NAG sing 251 n n C2 H2 NAG sing 252 n n C3 C4 NAG sing 253 n n C3 O3 NAG sing 254 n n C3 H3 NAG sing 255 n n C4 C5 NAG sing 256 n n C4 O4 NAG sing 257 n n C4 H4 NAG sing 258 n n C5 C6 NAG sing 259 n n C5 O5 NAG sing 260 n n C5 H5 NAG sing 261 n n C6 O6 NAG sing 262 n n C6 H61 NAG sing 263 n n C6 H62 NAG sing 264 n n C7 C8 NAG sing 265 n n C7 N2 NAG sing 266 n n C7 O7 NAG doub 267 n n C8 H81 NAG sing 268 n n C8 H82 NAG sing 269 n n C8 H83 NAG sing 270 n n N2 HN2 NAG sing 271 n n O1 HO1 NAG sing 272 n n O3 HO3 NAG sing 273 n n O4 HO4 NAG sing 274 n n O6 HO6 NAG sing 275 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7TZE _atom_sites.fract_transf_matrix[1][1] 0.027988 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000379 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010807 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01223 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG A 1 301 1257 NAG NAG . D 2 NAG A 1 302 1258 NAG NAG . E 2 NAG C 1 301 1257 NAG NAG . F 2 NAG C 1 302 1258 NAG NAG . G 3 EDO C 1 303 1301 EDO EDO . H 3 EDO C 1 304 1601 EDO EDO . I 4 HOH A 1 401 57 HOH HOH . I 4 HOH A 2 402 5 HOH HOH . I 4 HOH A 3 403 49 HOH HOH . I 4 HOH A 4 404 72 HOH HOH . I 4 HOH A 5 405 23 HOH HOH . I 4 HOH A 6 406 6 HOH HOH . I 4 HOH A 7 407 18 HOH HOH . I 4 HOH A 8 408 10 HOH HOH . I 4 HOH A 9 409 63 HOH HOH . I 4 HOH A 10 410 17 HOH HOH . I 4 HOH A 11 411 28 HOH HOH . I 4 HOH A 12 412 11 HOH HOH . I 4 HOH A 13 413 14 HOH HOH . I 4 HOH A 14 414 12 HOH HOH . I 4 HOH A 15 415 27 HOH HOH . I 4 HOH A 16 416 20 HOH HOH . I 4 HOH A 17 417 65 HOH HOH . I 4 HOH A 18 418 40 HOH HOH . I 4 HOH A 19 419 31 HOH HOH . I 4 HOH A 20 420 36 HOH HOH . I 4 HOH A 21 421 75 HOH HOH . I 4 HOH A 22 422 56 HOH HOH . I 4 HOH A 23 423 74 HOH HOH . I 4 HOH A 24 424 51 HOH HOH . I 4 HOH A 25 425 64 HOH HOH . I 4 HOH A 26 426 70 HOH HOH . J 4 HOH C 1 401 2 HOH HOH . J 4 HOH C 2 402 55 HOH HOH . J 4 HOH C 3 403 58 HOH HOH . J 4 HOH C 4 404 25 HOH HOH . J 4 HOH C 5 405 8 HOH HOH . J 4 HOH C 6 406 15 HOH HOH . J 4 HOH C 7 407 1 HOH HOH . J 4 HOH C 8 408 13 HOH HOH . J 4 HOH C 9 409 45 HOH HOH . J 4 HOH C 10 410 7 HOH HOH . J 4 HOH C 11 411 3 HOH HOH . J 4 HOH C 12 412 4 HOH HOH . J 4 HOH C 13 413 21 HOH HOH . J 4 HOH C 14 414 81 HOH HOH . J 4 HOH C 15 415 66 HOH HOH . J 4 HOH C 16 416 79 HOH HOH . J 4 HOH C 17 417 48 HOH HOH . J 4 HOH C 18 418 16 HOH HOH . J 4 HOH C 19 419 76 HOH HOH . J 4 HOH C 20 420 60 HOH HOH . J 4 HOH C 21 421 19 HOH HOH . J 4 HOH C 22 422 50 HOH HOH . J 4 HOH C 23 423 9 HOH HOH . J 4 HOH C 24 424 52 HOH HOH . J 4 HOH C 25 425 38 HOH HOH . J 4 HOH C 26 426 54 HOH HOH . J 4 HOH C 27 427 67 HOH HOH . J 4 HOH C 28 428 78 HOH HOH . J 4 HOH C 29 429 69 HOH HOH . J 4 HOH C 30 430 68 HOH HOH . J 4 HOH C 31 431 22 HOH HOH . J 4 HOH C 32 432 77 HOH HOH . J 4 HOH C 33 433 30 HOH HOH . J 4 HOH C 34 434 61 HOH HOH . J 4 HOH C 35 435 33 HOH HOH . J 4 HOH C 36 436 46 HOH HOH . J 4 HOH C 37 437 47 HOH HOH . J 4 HOH C 38 438 39 HOH HOH . J 4 HOH C 39 439 43 HOH HOH . J 4 HOH C 40 440 71 HOH HOH . J 4 HOH C 41 441 59 HOH HOH . J 4 HOH C 42 442 53 HOH HOH . J 4 HOH C 43 443 34 HOH HOH . J 4 HOH C 44 444 73 HOH HOH . J 4 HOH C 45 445 24 HOH HOH . J 4 HOH C 46 446 37 HOH HOH . J 4 HOH C 47 447 26 HOH HOH . J 4 HOH C 48 448 42 HOH HOH . J 4 HOH C 49 449 32 HOH HOH . J 4 HOH C 50 450 44 HOH HOH . J 4 HOH C 51 451 62 HOH HOH . J 4 HOH C 52 452 29 HOH HOH . J 4 HOH C 53 453 41 HOH HOH . J 4 HOH C 54 454 35 HOH HOH . J 4 HOH C 55 455 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . F 2 -34.646 6.299 -5.338 1 95.87 ? C1 NAG 302 C 1 HETATM 2 C C2 NAG . . . F 2 -34.21 5.167 -6.267 1 109.61 ? C2 NAG 302 C 1 HETATM 3 C C3 NAG . . . F 2 -34.64 5.505 -7.694 1 115.96 ? C3 NAG 302 C 1 HETATM 4 C C4 NAG . . . F 2 -36.143 5.749 -7.725 1 115.74 ? C4 NAG 302 C 1 HETATM 5 C C5 NAG . . . F 2 -36.537 6.818 -6.706 1 112.02 ? C5 NAG 302 C 1 HETATM 6 C C6 NAG . . . F 2 -38.032 7.009 -6.603 1 114.3 ? C6 NAG 302 C 1 HETATM 7 C C7 NAG . . . F 2 -31.934 4.262 -6.932 1 114.4 ? C7 NAG 302 C 1 HETATM 8 C C8 NAG . . . F 2 -30.506 4.211 -6.473 1 110.05 ? C8 NAG 302 C 1 HETATM 9 N N2 NAG . . . F 2 -32.767 4.961 -6.138 1 113.02 ? N2 NAG 302 C 1 HETATM 10 O O3 NAG . . . F 2 -34.356 4.414 -8.562 1 120.38 ? O3 NAG 302 C 1 HETATM 11 O O4 NAG . . . F 2 -36.537 6.18 -9.022 1 117.97 ? O4 NAG 302 C 1 HETATM 12 O O5 NAG . . . F 2 -36.075 6.45 -5.396 1 105.34 ? O5 NAG 302 C 1 HETATM 13 O O6 NAG . . . F 2 -38.712 5.761 -6.61 1 115.34 ? O6 NAG 302 C 1 HETATM 14 O O7 NAG . . . F 2 -32.294 3.722 -7.98 1 120.46 ? O7 NAG 302 C 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 374 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 14 #