data_7TZF
#
_model_server_result.job_id            g_kRGneuZ_ET5XansLq2jQ 
_model_server_result.datetime_utc      '2025-08-31 21:18:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7tzf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":507}' 
#
_entry.id    7TZF 
#
_exptl.entry_id    7TZF 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              486.726 
_entity.id                          11 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLESTEROL HEMISUCCINATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7TZF 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7TZF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    heptameric 
_pdbx_struct_assembly.oligomeric_count      7 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 11 O N N 
? 11 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 41 E CYS 40 1_555 A SG CYS 73 E CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 58 E CYS 57 1_555 A SG CYS 105 E CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf3 B SG CYS 2 P CYS 2 1_555 B SG CYS 7 P CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 C SG CYS 63 R CYS 55 1_555 C SG CYS 89 R CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 C SG CYS 80 R CYS 72 1_555 C SG CYS 120 R CYS 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf6 C SG CYS 103 R CYS 95 1_555 C SG CYS 142 R CYS 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf7 C SG CYS 227 R CYS 219 1_555 C SG CYS 297 R CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf8 G SG CYS 22 N CYS 22 1_555 G SG CYS 96 N CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf9 G SG CYS 99 N CYS 99 1_555 G SG CYS 107 N CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
covale ? covale1 A ND2 ASN 72 E ASN 71 1_555 H C1 NAG . E NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale2 B C TYR 37 P TYR 37 1_555 B N NH2 38 P NH2 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale3 C ND2 ASN 81 R ASN 73 1_555 K C1 NAG . R NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale4 C ND2 ASN 133 R ASN 125 1_555 L C1 NAG . R NAG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale5 C ND2 ASN 138 R ASN 130 1_555 J C1 NAG . R NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
#
_chem_comp.formula           'C31 H50 O4' 
_chem_comp.formula_weight    486.726 
_chem_comp.id                Y01 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLESTEROL HEMISUCCINATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CBA Y01 sing 596 n n 
CBA CAB Y01 sing 597 n n 
CBA CAN Y01 sing 598 n n 
CAN CAJ Y01 sing 599 n n 
CAJ CAO Y01 sing 600 n n 
CAO CBB Y01 sing 601 n n 
CBB CAC Y01 sing 602 n n 
CBB CBE Y01 sing 603 n n 
CBE CAP Y01 sing 604 n n 
CBE CBI Y01 sing 605 n n 
CAP CAQ Y01 sing 606 n n 
CAQ CBG Y01 sing 607 n n 
CBG CBI Y01 sing 608 n n 
CBG CBD Y01 sing 609 n n 
CBI CAE Y01 sing 610 n n 
CBI CAU Y01 sing 611 n n 
CAU CAS Y01 sing 612 n n 
CAS CBF Y01 sing 613 n n 
CBF CBD Y01 sing 614 n n 
CBF CBH Y01 sing 615 n n 
CBD CAK Y01 sing 616 n n 
CAK CAI Y01 sing 617 n n 
CAI CAZ Y01 doub 618 n n 
CAZ CAV Y01 sing 619 n n 
CAZ CBH Y01 sing 620 n n 
CAV CBC Y01 sing 621 n n 
CBH CAD Y01 sing 622 n n 
CBH CAT Y01 sing 623 n n 
CAT CAR Y01 sing 624 n n 
CAR CBC Y01 sing 625 n n 
CBC OAW Y01 sing 626 n n 
OAW CAY Y01 sing 627 n n 
CAY OAG Y01 doub 628 n n 
CAY CAM Y01 sing 629 n n 
CAM CAL Y01 sing 630 n n 
CAL CAX Y01 sing 631 n n 
CAX OAH Y01 sing 632 n n 
CAX OAF Y01 doub 633 n n 
CAA HAA1 Y01 sing 634 n n 
CAA HAA2 Y01 sing 635 n n 
CAA HAA3 Y01 sing 636 n n 
CBA HBA Y01 sing 637 n n 
CAB HAB1 Y01 sing 638 n n 
CAB HAB2 Y01 sing 639 n n 
CAB HAB3 Y01 sing 640 n n 
CAN HAN1 Y01 sing 641 n n 
CAN HAN2 Y01 sing 642 n n 
CAJ HAJ1 Y01 sing 643 n n 
CAJ HAJ2 Y01 sing 644 n n 
CAO HAO1 Y01 sing 645 n n 
CAO HAO2 Y01 sing 646 n n 
CBB HBB Y01 sing 647 n n 
CAC HAC1 Y01 sing 648 n n 
CAC HAC2 Y01 sing 649 n n 
CAC HAC3 Y01 sing 650 n n 
CBE HBE Y01 sing 651 n n 
CAP HAP1 Y01 sing 652 n n 
CAP HAP2 Y01 sing 653 n n 
CAQ HAQ1 Y01 sing 654 n n 
CAQ HAQ2 Y01 sing 655 n n 
CBG HBG Y01 sing 656 n n 
CBD HBD Y01 sing 657 n n 
CAE HAE1 Y01 sing 658 n n 
CAE HAE2 Y01 sing 659 n n 
CAE HAE3 Y01 sing 660 n n 
CAU HAU1 Y01 sing 661 n n 
CAU HAU2 Y01 sing 662 n n 
CAS HAS1 Y01 sing 663 n n 
CAS HAS2 Y01 sing 664 n n 
CBF HBF Y01 sing 665 n n 
CAK HAK1 Y01 sing 666 n n 
CAK HAK2 Y01 sing 667 n n 
CAI HAI Y01 sing 668 n n 
CAV HAV1 Y01 sing 669 n n 
CAV HAV2 Y01 sing 670 n n 
CBC HBC Y01 sing 671 n n 
CAD HAD1 Y01 sing 672 n n 
CAD HAD2 Y01 sing 673 n n 
CAD HAD3 Y01 sing 674 n n 
CAT HAT1 Y01 sing 675 n n 
CAT HAT2 Y01 sing 676 n n 
CAR HAR1 Y01 sing 677 n n 
CAR HAR2 Y01 sing 678 n n 
CAM HAM1 Y01 sing 679 n n 
CAM HAM2 Y01 sing 680 n n 
CAL HAL1 Y01 sing 681 n n 
CAL HAL2 Y01 sing 682 n n 
OAH HAH Y01 sing 683 n n 
#
_atom_sites.entry_id                     7TZF 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
H 8 NAG E 1 201 144 NAG NAG . 
I 9 P42 P 1 101 17 P42 P42 . 
J 8 NAG R 1 501 410 NAG NAG . 
K 8 NAG R 1 502 412 NAG NAG . 
L 8 NAG R 1 503 413 NAG NAG . 
M 10 PLM R 1 504 1 PLM PLM . 
N 10 PLM R 1 505 2 PLM PLM . 
O 11 Y01 R 1 506 3 Y01 Y01 . 
P 11 Y01 R 1 507 4 Y01 Y01 . 
Q 10 PLM R 1 508 5 PLM PLM . 
R 10 PLM R 1 509 6 PLM PLM . 
S 10 PLM R 1 510 9 PLM PLM . 
T 10 PLM R 1 511 11 PLM PLM . 
U 10 PLM R 1 512 12 PLM PLM . 
V 10 PLM R 1 513 13 PLM PLM . 
W 10 PLM R 1 514 14 PLM PLM . 
X 10 PLM R 1 515 15 PLM PLM . 
Y 10 PLM R 1 516 16 PLM PLM . 
Z 12 HOH P 1 201 20 HOH HOH . 
Z 12 HOH P 2 202 31 HOH HOH . 
Z 12 HOH P 3 203 17 HOH HOH . 
Z 12 HOH P 4 204 40 HOH HOH . 
Z 12 HOH P 5 205 32 HOH HOH . 
Z 12 HOH P 6 206 16 HOH HOH . 
AA 12 HOH R 1 601 1 HOH HOH . 
AA 12 HOH R 2 602 35 HOH HOH . 
AA 12 HOH R 3 603 36 HOH HOH . 
AA 12 HOH R 4 604 9 HOH HOH . 
AA 12 HOH R 5 605 13 HOH HOH . 
AA 12 HOH R 6 606 7 HOH HOH . 
AA 12 HOH R 7 607 38 HOH HOH . 
AA 12 HOH R 8 608 11 HOH HOH . 
AA 12 HOH R 9 609 15 HOH HOH . 
AA 12 HOH R 10 610 8 HOH HOH . 
AA 12 HOH R 11 611 24 HOH HOH . 
AA 12 HOH R 12 612 27 HOH HOH . 
AA 12 HOH R 13 613 28 HOH HOH . 
AA 12 HOH R 14 614 6 HOH HOH . 
AA 12 HOH R 15 615 21 HOH HOH . 
AA 12 HOH R 16 616 19 HOH HOH . 
AA 12 HOH R 17 617 23 HOH HOH . 
AA 12 HOH R 18 618 39 HOH HOH . 
BA 12 HOH A 1 401 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA Y01 . . . P 11 124.457 129.34 99.546 1 52.26 ? CAA Y01 507 R 1 
HETATM 2 C CBA Y01 . . . P 11 124.8 130.551 100.398 1 52.26 ? CBA Y01 507 R 1 
HETATM 3 C CAB Y01 . . . P 11 124.649 131.832 99.592 1 52.26 ? CAB Y01 507 R 1 
HETATM 4 C CAN Y01 . . . P 11 126.2 130.434 101.001 1 52.26 ? CAN Y01 507 R 1 
HETATM 5 C CAJ Y01 . . . P 11 126.415 129.267 101.932 1 52.26 ? CAJ Y01 507 R 1 
HETATM 6 C CAO Y01 . . . P 11 127.737 129.324 102.662 1 52.26 ? CAO Y01 507 R 1 
HETATM 7 C CBB Y01 . . . P 11 127.955 128.214 103.702 1 52.26 ? CBB Y01 507 R 1 
HETATM 8 C CAC Y01 . . . P 11 128.143 126.869 103.008 1 52.26 ? CAC Y01 507 R 1 
HETATM 9 C CBE Y01 . . . P 11 129.115 128.572 104.649 1 52.26 ? CBE Y01 507 R 1 
HETATM 10 C CAP Y01 . . . P 11 129.224 130.102 104.894 1 52.26 ? CAP Y01 507 R 1 
HETATM 11 C CAQ Y01 . . . P 11 129.715 130.294 106.342 1 52.26 ? CAQ Y01 507 R 1 
HETATM 12 C CBG Y01 . . . P 11 130.174 128.9 106.757 1 52.26 ? CBG Y01 507 R 1 
HETATM 13 C CBI Y01 . . . P 11 129.148 127.968 106.086 1 52.26 ? CBI Y01 507 R 1 
HETATM 14 C CAE Y01 . . . P 11 127.757 128.088 106.731 1 52.26 ? CAE Y01 507 R 1 
HETATM 15 C CAU Y01 . . . P 11 129.702 126.548 106.234 1 52.26 ? CAU Y01 507 R 1 
HETATM 16 C CAS Y01 . . . P 11 129.894 126.177 107.709 1 52.26 ? CAS Y01 507 R 1 
HETATM 17 C CBF Y01 . . . P 11 130.785 127.161 108.486 1 52.26 ? CBF Y01 507 R 1 
HETATM 18 C CBD Y01 . . . P 11 130.383 128.628 108.24 1 52.26 ? CBD Y01 507 R 1 
HETATM 19 C CAK Y01 . . . P 11 131.447 129.55 108.826 1 52.26 ? CAK Y01 507 R 1 
HETATM 20 C CAI Y01 . . . P 11 131.852 129.123 110.201 1 52.26 ? CAI Y01 507 R 1 
HETATM 21 C CAZ Y01 . . . P 11 131.474 127.989 110.772 1 52.26 ? CAZ Y01 507 R 1 
HETATM 22 C CAV Y01 . . . P 11 131.702 127.739 112.247 1 52.26 ? CAV Y01 507 R 1 
HETATM 23 C CBH Y01 . . . P 11 130.811 126.848 110.009 1 52.26 ? CBH Y01 507 R 1 
HETATM 24 C CAD Y01 . . . P 11 129.389 126.672 110.571 1 52.26 ? CAD Y01 507 R 1 
HETATM 25 C CAT Y01 . . . P 11 131.639 125.574 110.289 1 52.26 ? CAT Y01 507 R 1 
HETATM 26 C CAR Y01 . . . P 11 131.816 125.303 111.786 1 52.26 ? CAR Y01 507 R 1 
HETATM 27 C CBC Y01 . . . P 11 132.47 126.461 112.496 1 52.26 ? CBC Y01 507 R 1 
HETATM 28 O OAW Y01 . . . P 11 132.423 126.248 113.939 1 52.26 ? OAW Y01 507 R 1 
HETATM 29 C CAY Y01 . . . P 11 133.155 125.285 114.49 1 52.26 ? CAY Y01 507 R 1 
HETATM 30 O OAG Y01 . . . P 11 133.918 124.59 113.884 1 52.26 ? OAG Y01 507 R 1 
HETATM 31 C CAM Y01 . . . P 11 132.925 125.2 115.975 1 52.26 ? CAM Y01 507 R 1 
HETATM 32 C CAL Y01 . . . P 11 132.169 123.998 116.506 1 52.26 ? CAL Y01 507 R 1 
HETATM 33 C CAX Y01 . . . P 11 132.891 122.667 116.386 1 52.26 ? CAX Y01 507 R 1 
HETATM 34 O OAH Y01 . . . P 11 134.039 122.659 115.906 1 52.26 ? OAH Y01 507 R 1 
HETATM 35 O OAF Y01 . . . P 11 132.3 121.642 116.775 1 52.26 ? OAF Y01 507 R 1 
#
_model_server_stats.io_time_ms              29 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           403 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           35 
#