data_7U0O # _model_server_result.job_id FmyWDvdR0ofK0AmpH_BLXg _model_server_result.datetime_utc '2024-10-19 17:45:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u0o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":303}' # _entry.id 7U0O # _exptl.entry_id 7U0O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.36 _cell.angle_gamma 90 _cell.entry_id 7U0O _cell.length_a 79.3 _cell.length_b 101.54 _cell.length_c 76.48 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U0O _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 47.754405 0 69.671126 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 231 A ASP 223 1_555 E NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc2 A O GLN 232 A GLN 224 1_555 E NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.856 ? metalc ? metalc3 A O ALA 234 A ALA 226 1_555 E NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc4 E NA NA . A NA 303 1_555 K O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc5 E NA NA . A NA 303 1_555 K O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc6 E NA NA . A NA 303 1_555 K O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc7 B O ASP 231 B ASP 223 1_555 I NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc8 B O GLN 232 B GLN 224 1_555 I NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc9 B O ALA 234 B ALA 226 1_555 I NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? metalc ? metalc10 I NA NA . B NA 303 1_555 L O HOH . B HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc11 I NA NA . B NA 303 1_555 L O HOH . B HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.879 ? metalc ? metalc12 I NA NA . B NA 303 1_555 L O HOH . B HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7U0O _atom_sites.fract_transf_matrix[1][1] 0.01261 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00571 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014353 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 301 301 NAD NAD . D 3 3KY A 1 302 302 3KY 3KY . E 4 NA A 1 303 303 NA NA . F 5 CL A 1 304 304 CL CL . G 2 NAD B 1 301 301 NAD NAD . H 3 3KY B 1 302 302 3KY 3KY . I 4 NA B 1 303 303 NA NA . J 5 CL B 1 304 304 CL CL . K 6 HOH A 1 401 146 HOH HOH . K 6 HOH A 2 402 238 HOH HOH . K 6 HOH A 3 403 258 HOH HOH . K 6 HOH A 4 404 181 HOH HOH . K 6 HOH A 5 405 198 HOH HOH . K 6 HOH A 6 406 35 HOH HOH . K 6 HOH A 7 407 89 HOH HOH . K 6 HOH A 8 408 201 HOH HOH . K 6 HOH A 9 409 216 HOH HOH . K 6 HOH A 10 410 3 HOH HOH . K 6 HOH A 11 411 245 HOH HOH . K 6 HOH A 12 412 174 HOH HOH . K 6 HOH A 13 413 118 HOH HOH . K 6 HOH A 14 414 48 HOH HOH . K 6 HOH A 15 415 195 HOH HOH . K 6 HOH A 16 416 95 HOH HOH . K 6 HOH A 17 417 189 HOH HOH . K 6 HOH A 18 418 190 HOH HOH . K 6 HOH A 19 419 204 HOH HOH . K 6 HOH A 20 420 131 HOH HOH . K 6 HOH A 21 421 150 HOH HOH . K 6 HOH A 22 422 185 HOH HOH . K 6 HOH A 23 423 208 HOH HOH . K 6 HOH A 24 424 199 HOH HOH . K 6 HOH A 25 425 11 HOH HOH . K 6 HOH A 26 426 41 HOH HOH . K 6 HOH A 27 427 59 HOH HOH . K 6 HOH A 28 428 61 HOH HOH . K 6 HOH A 29 429 21 HOH HOH . K 6 HOH A 30 430 161 HOH HOH . K 6 HOH A 31 431 240 HOH HOH . K 6 HOH A 32 432 111 HOH HOH . K 6 HOH A 33 433 4 HOH HOH . K 6 HOH A 34 434 116 HOH HOH . K 6 HOH A 35 435 7 HOH HOH . K 6 HOH A 36 436 46 HOH HOH . K 6 HOH A 37 437 215 HOH HOH . K 6 HOH A 38 438 210 HOH HOH . K 6 HOH A 39 439 54 HOH HOH . K 6 HOH A 40 440 164 HOH HOH . K 6 HOH A 41 441 165 HOH HOH . K 6 HOH A 42 442 197 HOH HOH . K 6 HOH A 43 443 24 HOH HOH . K 6 HOH A 44 444 15 HOH HOH . K 6 HOH A 45 445 14 HOH HOH . K 6 HOH A 46 446 246 HOH HOH . K 6 HOH A 47 447 50 HOH HOH . K 6 HOH A 48 448 206 HOH HOH . K 6 HOH A 49 449 5 HOH HOH . K 6 HOH A 50 450 96 HOH HOH . K 6 HOH A 51 451 235 HOH HOH . K 6 HOH A 52 452 23 HOH HOH . K 6 HOH A 53 453 64 HOH HOH . K 6 HOH A 54 454 16 HOH HOH . K 6 HOH A 55 455 79 HOH HOH . K 6 HOH A 56 456 60 HOH HOH . K 6 HOH A 57 457 13 HOH HOH . K 6 HOH A 58 458 214 HOH HOH . K 6 HOH A 59 459 149 HOH HOH . K 6 HOH A 60 460 142 HOH HOH . K 6 HOH A 61 461 104 HOH HOH . K 6 HOH A 62 462 205 HOH HOH . K 6 HOH A 63 463 40 HOH HOH . K 6 HOH A 64 464 129 HOH HOH . K 6 HOH A 65 465 105 HOH HOH . K 6 HOH A 66 466 187 HOH HOH . K 6 HOH A 67 467 29 HOH HOH . K 6 HOH A 68 468 2 HOH HOH . K 6 HOH A 69 469 76 HOH HOH . K 6 HOH A 70 470 126 HOH HOH . K 6 HOH A 71 471 26 HOH HOH . K 6 HOH A 72 472 156 HOH HOH . K 6 HOH A 73 473 160 HOH HOH . K 6 HOH A 74 474 70 HOH HOH . K 6 HOH A 75 475 28 HOH HOH . K 6 HOH A 76 476 176 HOH HOH . K 6 HOH A 77 477 77 HOH HOH . K 6 HOH A 78 478 154 HOH HOH . K 6 HOH A 79 479 141 HOH HOH . K 6 HOH A 80 480 99 HOH HOH . K 6 HOH A 81 481 257 HOH HOH . K 6 HOH A 82 482 211 HOH HOH . K 6 HOH A 83 483 264 HOH HOH . K 6 HOH A 84 484 49 HOH HOH . K 6 HOH A 85 485 248 HOH HOH . K 6 HOH A 86 486 20 HOH HOH . K 6 HOH A 87 487 34 HOH HOH . K 6 HOH A 88 488 42 HOH HOH . K 6 HOH A 89 489 239 HOH HOH . K 6 HOH A 90 490 71 HOH HOH . K 6 HOH A 91 491 78 HOH HOH . K 6 HOH A 92 492 84 HOH HOH . K 6 HOH A 93 493 182 HOH HOH . K 6 HOH A 94 494 88 HOH HOH . K 6 HOH A 95 495 138 HOH HOH . K 6 HOH A 96 496 200 HOH HOH . K 6 HOH A 97 497 186 HOH HOH . K 6 HOH A 98 498 173 HOH HOH . K 6 HOH A 99 499 236 HOH HOH . K 6 HOH A 100 500 128 HOH HOH . K 6 HOH A 101 501 179 HOH HOH . K 6 HOH A 102 502 55 HOH HOH . K 6 HOH A 103 503 241 HOH HOH . K 6 HOH A 104 504 259 HOH HOH . K 6 HOH A 105 505 213 HOH HOH . K 6 HOH A 106 506 196 HOH HOH . K 6 HOH A 107 507 135 HOH HOH . K 6 HOH A 108 508 175 HOH HOH . K 6 HOH A 109 509 75 HOH HOH . K 6 HOH A 110 510 209 HOH HOH . K 6 HOH A 111 511 143 HOH HOH . K 6 HOH A 112 512 212 HOH HOH . K 6 HOH A 113 513 242 HOH HOH . K 6 HOH A 114 514 266 HOH HOH . K 6 HOH A 115 515 132 HOH HOH . K 6 HOH A 116 516 162 HOH HOH . K 6 HOH A 117 517 188 HOH HOH . K 6 HOH A 118 518 247 HOH HOH . K 6 HOH A 119 519 207 HOH HOH . K 6 HOH A 120 520 163 HOH HOH . K 6 HOH A 121 521 231 HOH HOH . K 6 HOH A 122 522 87 HOH HOH . K 6 HOH A 123 523 265 HOH HOH . K 6 HOH A 124 524 125 HOH HOH . K 6 HOH A 125 525 86 HOH HOH . K 6 HOH A 126 526 155 HOH HOH . K 6 HOH A 127 527 158 HOH HOH . K 6 HOH A 128 528 106 HOH HOH . L 6 HOH B 1 401 67 HOH HOH . L 6 HOH B 2 402 250 HOH HOH . L 6 HOH B 3 403 112 HOH HOH . L 6 HOH B 4 404 224 HOH HOH . L 6 HOH B 5 405 230 HOH HOH . L 6 HOH B 6 406 8 HOH HOH . L 6 HOH B 7 407 159 HOH HOH . L 6 HOH B 8 408 220 HOH HOH . L 6 HOH B 9 409 74 HOH HOH . L 6 HOH B 10 410 107 HOH HOH . L 6 HOH B 11 411 253 HOH HOH . L 6 HOH B 12 412 51 HOH HOH . L 6 HOH B 13 413 22 HOH HOH . L 6 HOH B 14 414 244 HOH HOH . L 6 HOH B 15 415 137 HOH HOH . L 6 HOH B 16 416 234 HOH HOH . L 6 HOH B 17 417 140 HOH HOH . L 6 HOH B 18 418 261 HOH HOH . L 6 HOH B 19 419 178 HOH HOH . L 6 HOH B 20 420 47 HOH HOH . L 6 HOH B 21 421 227 HOH HOH . L 6 HOH B 22 422 37 HOH HOH . L 6 HOH B 23 423 62 HOH HOH . L 6 HOH B 24 424 66 HOH HOH . L 6 HOH B 25 425 218 HOH HOH . L 6 HOH B 26 426 58 HOH HOH . L 6 HOH B 27 427 52 HOH HOH . L 6 HOH B 28 428 81 HOH HOH . L 6 HOH B 29 429 223 HOH HOH . L 6 HOH B 30 430 83 HOH HOH . L 6 HOH B 31 431 43 HOH HOH . L 6 HOH B 32 432 123 HOH HOH . L 6 HOH B 33 433 98 HOH HOH . L 6 HOH B 34 434 18 HOH HOH . L 6 HOH B 35 435 226 HOH HOH . L 6 HOH B 36 436 10 HOH HOH . L 6 HOH B 37 437 249 HOH HOH . L 6 HOH B 38 438 217 HOH HOH . L 6 HOH B 39 439 255 HOH HOH . L 6 HOH B 40 440 30 HOH HOH . L 6 HOH B 41 441 6 HOH HOH . L 6 HOH B 42 442 109 HOH HOH . L 6 HOH B 43 443 63 HOH HOH . L 6 HOH B 44 444 110 HOH HOH . L 6 HOH B 45 445 1 HOH HOH . L 6 HOH B 46 446 103 HOH HOH . L 6 HOH B 47 447 193 HOH HOH . L 6 HOH B 48 448 121 HOH HOH . L 6 HOH B 49 449 56 HOH HOH . L 6 HOH B 50 450 19 HOH HOH . L 6 HOH B 51 451 57 HOH HOH . L 6 HOH B 52 452 97 HOH HOH . L 6 HOH B 53 453 17 HOH HOH . L 6 HOH B 54 454 12 HOH HOH . L 6 HOH B 55 455 168 HOH HOH . L 6 HOH B 56 456 167 HOH HOH . L 6 HOH B 57 457 133 HOH HOH . L 6 HOH B 58 458 31 HOH HOH . L 6 HOH B 59 459 243 HOH HOH . L 6 HOH B 60 460 90 HOH HOH . L 6 HOH B 61 461 68 HOH HOH . L 6 HOH B 62 462 39 HOH HOH . L 6 HOH B 63 463 33 HOH HOH . L 6 HOH B 64 464 25 HOH HOH . L 6 HOH B 65 465 53 HOH HOH . L 6 HOH B 66 466 151 HOH HOH . L 6 HOH B 67 467 169 HOH HOH . L 6 HOH B 68 468 254 HOH HOH . L 6 HOH B 69 469 202 HOH HOH . L 6 HOH B 70 470 136 HOH HOH . L 6 HOH B 71 471 32 HOH HOH . L 6 HOH B 72 472 44 HOH HOH . L 6 HOH B 73 473 27 HOH HOH . L 6 HOH B 74 474 194 HOH HOH . L 6 HOH B 75 475 38 HOH HOH . L 6 HOH B 76 476 183 HOH HOH . L 6 HOH B 77 477 73 HOH HOH . L 6 HOH B 78 478 148 HOH HOH . L 6 HOH B 79 479 36 HOH HOH . L 6 HOH B 80 480 219 HOH HOH . L 6 HOH B 81 481 222 HOH HOH . L 6 HOH B 82 482 260 HOH HOH . L 6 HOH B 83 483 9 HOH HOH . L 6 HOH B 84 484 93 HOH HOH . L 6 HOH B 85 485 145 HOH HOH . L 6 HOH B 86 486 113 HOH HOH . L 6 HOH B 87 487 82 HOH HOH . L 6 HOH B 88 488 157 HOH HOH . L 6 HOH B 89 489 100 HOH HOH . L 6 HOH B 90 490 91 HOH HOH . L 6 HOH B 91 491 94 HOH HOH . L 6 HOH B 92 492 232 HOH HOH . L 6 HOH B 93 493 153 HOH HOH . L 6 HOH B 94 494 127 HOH HOH . L 6 HOH B 95 495 191 HOH HOH . L 6 HOH B 96 496 45 HOH HOH . L 6 HOH B 97 497 256 HOH HOH . L 6 HOH B 98 498 130 HOH HOH . L 6 HOH B 99 499 114 HOH HOH . L 6 HOH B 100 500 252 HOH HOH . L 6 HOH B 101 501 221 HOH HOH . L 6 HOH B 102 502 124 HOH HOH . L 6 HOH B 103 503 166 HOH HOH . L 6 HOH B 104 504 72 HOH HOH . L 6 HOH B 105 505 144 HOH HOH . L 6 HOH B 106 506 177 HOH HOH . L 6 HOH B 107 507 228 HOH HOH . L 6 HOH B 108 508 192 HOH HOH . L 6 HOH B 109 509 229 HOH HOH . L 6 HOH B 110 510 262 HOH HOH . L 6 HOH B 111 511 251 HOH HOH . L 6 HOH B 112 512 233 HOH HOH . L 6 HOH B 113 513 92 HOH HOH . L 6 HOH B 114 514 225 HOH HOH . L 6 HOH B 115 515 85 HOH HOH . L 6 HOH B 116 516 122 HOH HOH . L 6 HOH B 117 517 263 HOH HOH . L 6 HOH B 118 518 117 HOH HOH . L 6 HOH B 119 519 65 HOH HOH . L 6 HOH B 120 520 147 HOH HOH . L 6 HOH B 121 521 115 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x 4.312 _atom_site.Cartn_y -11.344 _atom_site.Cartn_z 23.611 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #