data_7U1Q # _model_server_result.job_id SajpHtQz0_r9FRaDssWWCQ _model_server_result.datetime_utc '2024-11-21 13:49:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u1q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":1607}' # _entry.id 7U1Q # _exptl.entry_id 7U1Q _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 734.039 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U1Q _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U1Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 T N N ? 8 X N N ? 8 Z N N ? 8 AA N N ? 8 BA N N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n F NAG 1 F 1 NAG E 2101 NAG 3 n F NAG 2 F 2 NAG E 2102 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 110 B CYS 110 1_555 B SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 D SG CYS 110 D CYS 110 1_555 D SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 E ND2 ASN 10 E ASN 10 1_555 F C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale2 F O4 NAG . F NAG 1 1_555 F C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? metalc ? metalc1 A O THR 130 A THR 130 1_555 H K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.686 ? metalc ? metalc2 A OG1 THR 130 A THR 130 1_555 H K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.2 ? metalc ? metalc3 H K K . A K 402 1_555 B O THR 130 B THR 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc4 H K K . A K 402 1_555 B OG1 THR 130 B THR 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? metalc ? metalc5 H K K . A K 402 1_555 C O THR 130 C THR 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc6 H K K . A K 402 1_555 C OG1 THR 130 C THR 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.247 ? metalc ? metalc7 H K K . A K 402 1_555 D O THR 130 D THR 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? metalc ? metalc8 H K K . A K 402 1_555 D OG1 THR 130 D THR 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.232 ? # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O4 PTY sing 693 n n C1 C6 PTY sing 694 n n C1 HC11 PTY sing 695 n n C1 HC12 PTY sing 696 n n C2 C3 PTY sing 697 n n C2 N1 PTY sing 698 n n C2 HC21 PTY sing 699 n n C2 HC22 PTY sing 700 n n C3 O11 PTY sing 701 n n C3 HC31 PTY sing 702 n n C3 HC32 PTY sing 703 n n O4 C30 PTY sing 704 n n C5 C6 PTY sing 705 n n C5 O14 PTY sing 706 n n C5 HC51 PTY sing 707 n n C5 HC52 PTY sing 708 n n C6 O7 PTY sing 709 n n C6 HC6 PTY sing 710 n n O7 C8 PTY sing 711 n n C8 O10 PTY doub 712 n n C8 C11 PTY sing 713 n n C11 C12 PTY sing 714 n n C11 H111 PTY sing 715 n n C11 H112 PTY sing 716 n n C12 C13 PTY sing 717 n n C12 H121 PTY sing 718 n n C12 H122 PTY sing 719 n n C13 C14 PTY sing 720 n n C13 H131 PTY sing 721 n n C13 H132 PTY sing 722 n n C14 C15 PTY sing 723 n n C14 H141 PTY sing 724 n n C14 H142 PTY sing 725 n n C15 C16 PTY sing 726 n n C15 H151 PTY sing 727 n n C15 H152 PTY sing 728 n n C16 C17 PTY sing 729 n n C16 H161 PTY sing 730 n n C16 H162 PTY sing 731 n n C17 C18 PTY sing 732 n n C17 H171 PTY sing 733 n n C17 H172 PTY sing 734 n n C18 C19 PTY sing 735 n n C18 H181 PTY sing 736 n n C18 H182 PTY sing 737 n n C19 C20 PTY sing 738 n n C19 H191 PTY sing 739 n n C19 H192 PTY sing 740 n n C20 C21 PTY sing 741 n n C20 H201 PTY sing 742 n n C20 H202 PTY sing 743 n n C21 C22 PTY sing 744 n n C21 H211 PTY sing 745 n n C21 H212 PTY sing 746 n n C22 C23 PTY sing 747 n n C22 H221 PTY sing 748 n n C22 H222 PTY sing 749 n n C23 C24 PTY sing 750 n n C23 H231 PTY sing 751 n n C23 H232 PTY sing 752 n n C24 C25 PTY sing 753 n n C24 H241 PTY sing 754 n n C24 H242 PTY sing 755 n n C25 C26 PTY sing 756 n n C25 H251 PTY sing 757 n n C25 H252 PTY sing 758 n n C26 C27 PTY sing 759 n n C26 H261 PTY sing 760 n n C26 H262 PTY sing 761 n n C27 C28 PTY sing 762 n n C27 H271 PTY sing 763 n n C27 H272 PTY sing 764 n n C28 C29 PTY sing 765 n n C28 H281 PTY sing 766 n n C28 H282 PTY sing 767 n n C29 H291 PTY sing 768 n n C29 H292 PTY sing 769 n n C29 H293 PTY sing 770 n n C30 C31 PTY sing 771 n n C30 O30 PTY doub 772 n n C31 C32 PTY sing 773 n n C31 H311 PTY sing 774 n n C31 H312 PTY sing 775 n n C32 C33 PTY sing 776 n n C32 H321 PTY sing 777 n n C32 H322 PTY sing 778 n n C33 C34 PTY sing 779 n n C33 H331 PTY sing 780 n n C33 H332 PTY sing 781 n n C34 C35 PTY sing 782 n n C34 H341 PTY sing 783 n n C34 H342 PTY sing 784 n n C35 C36 PTY sing 785 n n C35 H351 PTY sing 786 n n C35 H352 PTY sing 787 n n C36 C37 PTY sing 788 n n C36 H361 PTY sing 789 n n C36 H362 PTY sing 790 n n C37 C38 PTY sing 791 n n C37 H371 PTY sing 792 n n C37 H372 PTY sing 793 n n C38 C39 PTY sing 794 n n C38 H381 PTY sing 795 n n C38 H382 PTY sing 796 n n C39 C40 PTY sing 797 n n C39 H391 PTY sing 798 n n C39 H392 PTY sing 799 n n C40 C41 PTY sing 800 n n C40 H401 PTY sing 801 n n C40 H402 PTY sing 802 n n C41 C42 PTY sing 803 n n C41 H411 PTY sing 804 n n C41 H412 PTY sing 805 n n C42 C43 PTY sing 806 n n C42 H421 PTY sing 807 n n C42 H422 PTY sing 808 n n C43 C44 PTY sing 809 n n C43 H431 PTY sing 810 n n C43 H432 PTY sing 811 n n C44 H441 PTY sing 812 n n C44 H442 PTY sing 813 n n C44 H443 PTY sing 814 n n P1 O11 PTY sing 815 n n P1 O12 PTY sing 816 n n P1 O13 PTY doub 817 n n P1 O14 PTY sing 818 n n O12 H12O PTY sing 819 n n N1 HN11 PTY sing 820 n n N1 HN12 PTY sing 821 n n # _atom_sites.entry_id 7U1Q _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ATP A 1 401 401 ATP ATP . H 5 K A 1 402 504 K K . I 6 P5S A 1 403 508 P5S P5S . J 7 POV A 1 404 505 POV POV . K 4 ATP B 1 401 401 ATP ATP . L 7 POV B 1 402 505 POV POV . M 6 P5S B 1 403 506 P5S P5S . N 4 ATP C 1 401 401 ATP ATP . O 6 P5S C 1 402 506 P5S P5S . P 7 POV C 1 403 505 POV POV . Q 4 ATP D 1 401 401 ATP ATP . R 6 P5S D 1 402 505 P5S P5S . S 7 POV D 1 403 506 POV POV . T 8 PTY E 1 1601 506 PTY PTY . U 6 P5S E 1 1602 507 P5S P5S . V 9 BJX E 1 1603 2001 BJX BJX . W 4 ATP E 1 1604 2002 ATP ATP . X 8 PTY E 1 1605 2011 PTY PTY . Y 7 POV E 1 1606 2003 POV POV . Z 8 PTY E 1 1607 2009 PTY PTY . AA 8 PTY E 1 1608 2005 PTY PTY . BA 8 PTY E 1 1609 2010 PTY PTY . CA 6 P5S E 1 1610 2007 P5S P5S . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . Z 8 193.208 167.913 164.775 1 48.64 ? C1 PTY 1607 E 1 HETATM 2 C C2 PTY . . . Z 8 190.688 169.455 158.769 1 48.64 ? C2 PTY 1607 E 1 HETATM 3 C C3 PTY . . . Z 8 190.979 170.209 160.047 1 48.64 ? C3 PTY 1607 E 1 HETATM 4 O O4 PTY . . . Z 8 191.989 167.228 165.057 1 48.64 ? O4 PTY 1607 E 1 HETATM 5 C C5 PTY . . . Z 8 193.513 170.003 163.411 1 48.64 ? C5 PTY 1607 E 1 HETATM 6 C C6 PTY . . . Z 8 192.888 169.388 164.651 1 48.64 ? C6 PTY 1607 E 1 HETATM 7 O O7 PTY . . . Z 8 193.31 170.04 165.863 1 48.64 ? O7 PTY 1607 E 1 HETATM 8 C C8 PTY . . . Z 8 194.521 169.855 166.396 1 48.64 ? C8 PTY 1607 E 1 HETATM 9 O O10 PTY . . . Z 8 195.533 169.685 165.764 1 48.64 ? O10 PTY 1607 E 1 HETATM 10 C C11 PTY . . . Z 8 194.465 169.901 167.898 1 48.64 ? C11 PTY 1607 E 1 HETATM 11 C C12 PTY . . . Z 8 195.833 169.862 168.557 1 48.64 ? C12 PTY 1607 E 1 HETATM 12 C C13 PTY . . . Z 8 196.241 168.431 168.878 1 48.64 ? C13 PTY 1607 E 1 HETATM 13 C C14 PTY . . . Z 8 197.018 168.295 170.181 1 48.64 ? C14 PTY 1607 E 1 HETATM 14 C C15 PTY . . . Z 8 196.326 167.439 171.233 1 48.64 ? C15 PTY 1607 E 1 HETATM 15 C C16 PTY . . . Z 8 197.045 167.484 172.576 1 48.64 ? C16 PTY 1607 E 1 HETATM 16 C C17 PTY . . . Z 8 197.16 168.874 173.186 1 48.64 ? C17 PTY 1607 E 1 HETATM 17 C C18 PTY . . . Z 8 197.707 168.835 174.608 1 48.64 ? C18 PTY 1607 E 1 HETATM 18 C C19 PTY . . . Z 8 199.098 169.438 174.753 1 48.64 ? C19 PTY 1607 E 1 HETATM 19 C C20 PTY . . . Z 8 200.187 168.376 174.859 1 48.64 ? C20 PTY 1607 E 1 HETATM 20 C C30 PTY . . . Z 8 192.081 165.971 165.486 1 48.64 ? C30 PTY 1607 E 1 HETATM 21 C C31 PTY . . . Z 8 191.541 165.824 166.882 1 48.64 ? C31 PTY 1607 E 1 HETATM 22 O O30 PTY . . . Z 8 192.544 165.081 164.819 1 48.64 ? O30 PTY 1607 E 1 HETATM 23 C C32 PTY . . . Z 8 192.456 165.038 167.806 1 48.64 ? C32 PTY 1607 E 1 HETATM 24 C C33 PTY . . . Z 8 192.335 165.492 169.255 1 48.64 ? C33 PTY 1607 E 1 HETATM 25 C C34 PTY . . . Z 8 192.615 164.366 170.242 1 48.64 ? C34 PTY 1607 E 1 HETATM 26 C C35 PTY . . . Z 8 192.001 164.595 171.617 1 48.64 ? C35 PTY 1607 E 1 HETATM 27 P P1 PTY . . . Z 8 192.933 171.429 161.3 1 48.64 ? P1 PTY 1607 E 1 HETATM 28 O O11 PTY . . . Z 8 192.38 170.424 160.134 1 48.64 ? O11 PTY 1607 E 1 HETATM 29 O O12 PTY . . . Z 8 194.424 171.539 161.22 1 48.64 ? O12 PTY 1607 E 1 HETATM 30 O O13 PTY . . . Z 8 192.103 172.674 161.37 1 48.64 ? O13 PTY 1607 E 1 HETATM 31 O O14 PTY . . . Z 8 192.503 170.403 162.514 1 48.64 ? O14 PTY 1607 E 1 HETATM 32 N N1 PTY . . . Z 8 190.44 168.046 159.026 1 48.64 ? N1 PTY 1607 E 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #