data_7U24
#
_model_server_result.job_id            PUhdxy68c8ab6zehCeKJuw 
_model_server_result.datetime_utc      '2024-11-30 11:20:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u24 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":2001}' 
#
_entry.id    7U24 
#
_exptl.entry_id    7U24 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              494.004 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-chloro-N-(2-{4-[(cyclohexylcarbamoyl)sulfamoyl]phenyl}ethyl)-2-methoxybenzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7U24 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U24 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      7 
_struct_asym.id                             W 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 110 B CYS 110 1_555 B SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 110 D CYS 110 1_555 D SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 E ND2 ASN 10 E ASN 10 1_555 Y C1 NAG . E NAG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C23 H28 Cl N3 O5 S' 
_chem_comp.formula_weight    494.004 
_chem_comp.id                GBM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-chloro-N-(2-{4-[(cyclohexylcarbamoyl)sulfamoyl]phenyl}ethyl)-2-methoxybenzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Glibenclamide;Glyburide 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CL1 C31 GBM sing 132 n n 
C31 C29 GBM doub 133 n y 
C31 C32 GBM sing 134 n y 
C29 C27 GBM sing 135 n y 
C32 C30 GBM doub 136 n y 
O6 C26 GBM doub 137 n n 
C27 C26 GBM sing 138 n n 
C27 C28 GBM doub 139 n y 
C30 C28 GBM sing 140 n y 
C26 N10 GBM sing 141 n n 
C28 O7 GBM sing 142 n n 
O3 C17 GBM doub 143 n n 
N10 C25 GBM sing 144 n n 
C23 C21 GBM doub 145 n y 
C23 C19 GBM sing 146 n y 
O7 C33 GBM sing 147 n n 
C21 C18 GBM sing 148 n y 
C25 C20 GBM sing 149 n n 
N9 C17 GBM sing 150 n n 
N9 S2 GBM sing 151 n n 
C17 N8 GBM sing 152 n n 
C20 C19 GBM sing 153 n n 
C19 C24 GBM doub 154 n y 
O5 S2 GBM doub 155 n n 
C18 S2 GBM sing 156 n n 
C18 C22 GBM doub 157 n y 
C14 C12 GBM sing 158 n n 
C14 C16 GBM sing 159 n n 
C13 C11 GBM sing 160 n n 
C13 C15 GBM sing 161 n n 
S2 O4 GBM doub 162 n n 
C12 C11 GBM sing 163 n n 
N8 C11 GBM sing 164 n n 
C15 C16 GBM sing 165 n n 
C24 C22 GBM sing 166 n y 
N8 H1 GBM sing 167 n n 
N9 H2 GBM sing 168 n n 
N10 H3 GBM sing 169 n n 
C11 H4 GBM sing 170 n n 
C12 H5 GBM sing 171 n n 
C12 H6 GBM sing 172 n n 
C13 H7 GBM sing 173 n n 
C13 H8 GBM sing 174 n n 
C14 H9 GBM sing 175 n n 
C14 H10 GBM sing 176 n n 
C15 H11 GBM sing 177 n n 
C15 H12 GBM sing 178 n n 
C16 H13 GBM sing 179 n n 
C16 H14 GBM sing 180 n n 
C20 H15 GBM sing 181 n n 
C20 H16 GBM sing 182 n n 
C21 H17 GBM sing 183 n n 
C22 H18 GBM sing 184 n n 
C23 H19 GBM sing 185 n n 
C24 H20 GBM sing 186 n n 
C25 H21 GBM sing 187 n n 
C25 H22 GBM sing 188 n n 
C29 H23 GBM sing 189 n n 
C30 H24 GBM sing 190 n n 
C32 H25 GBM sing 191 n n 
C33 H26 GBM sing 192 n n 
C33 H27 GBM sing 193 n n 
C33 H28 GBM sing 194 n n 
#
_atom_sites.entry_id                     7U24 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 ATP A 1 401 401 ATP ATP . 
G 4 PTY A 1 402 506 PTY PTY . 
H 5 POV A 1 403 505 POV POV . 
I 6 P5S A 1 404 508 P5S P5S . 
J 6 P5S A 1 405 507 P5S P5S . 
K 3 ATP B 1 401 401 ATP ATP . 
L 5 POV B 1 402 505 POV POV . 
M 6 P5S B 1 403 506 P5S P5S . 
N 6 P5S B 1 404 507 P5S P5S . 
O 3 ATP C 1 401 401 ATP ATP . 
P 5 POV C 1 402 505 POV POV . 
Q 6 P5S C 1 403 506 P5S P5S . 
R 6 P5S D 1 401 507 P5S P5S . 
S 3 ATP D 1 402 401 ATP ATP . 
T 5 POV D 1 403 506 POV POV . 
U 6 P5S D 1 404 505 P5S P5S . 
V 6 P5S D 1 405 507 P5S P5S . 
W 7 GBM E 1 2001 2001 GBM GBM . 
X 3 ATP E 1 2002 2002 ATP ATP . 
Y 8 NAG E 1 2003 2101 NAG NAG . 
Z 4 PTY E 1 2004 2009 PTY PTY . 
AA 4 PTY E 1 2005 2003 PTY PTY . 
BA 4 PTY E 1 2006 2004 PTY PTY . 
CA 4 PTY E 1 2007 2008 PTY PTY . 
DA 6 P5S E 1 2008 2006 P5S P5S . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 GBM . . . W 7 216.18 171.355 150.061 1 33.84 ? O3 GBM 2001 E 1 
HETATM 2 O O4 GBM . . . W 7 217.089 170.646 152.482 1 33.84 ? O4 GBM 2001 E 1 
HETATM 3 O O5 GBM . . . W 7 215.246 170.074 154.057 1 33.84 ? O5 GBM 2001 E 1 
HETATM 4 O O6 GBM . . . W 7 218.299 175.618 156.115 1 33.84 ? O6 GBM 2001 E 1 
HETATM 5 CL CL1 GBM . . . W 7 218.56 177.056 161.948 1 33.84 ? CL1 GBM 2001 E 1 
HETATM 6 S S2 GBM . . . W 7 215.712 170.877 152.925 1 33.84 ? S2 GBM 2001 E 1 
HETATM 7 O O7 GBM . . . W 7 216.917 173.275 157.646 1 33.84 ? O7 GBM 2001 E 1 
HETATM 8 N N8 GBM . . . W 7 214.223 170.677 149.117 1 33.84 ? N8 GBM 2001 E 1 
HETATM 9 N N9 GBM . . . W 7 214.665 170.596 151.601 1 33.84 ? N9 GBM 2001 E 1 
HETATM 10 N N10 GBM . . . W 7 216.41 176.846 156.49 1 33.84 ? N10 GBM 2001 E 1 
HETATM 11 C C11 GBM . . . W 7 214.714 171.002 147.789 1 33.84 ? C11 GBM 2001 E 1 
HETATM 12 C C12 GBM . . . W 7 214.571 172.493 147.516 1 33.84 ? C12 GBM 2001 E 1 
HETATM 13 C C13 GBM . . . W 7 213.924 170.25 146.729 1 33.84 ? C13 GBM 2001 E 1 
HETATM 14 C C14 GBM . . . W 7 215.265 172.814 146.195 1 33.84 ? C14 GBM 2001 E 1 
HETATM 15 C C15 GBM . . . W 7 214.576 170.485 145.369 1 33.84 ? C15 GBM 2001 E 1 
HETATM 16 C C16 GBM . . . W 7 214.715 171.974 145.04 1 33.84 ? C16 GBM 2001 E 1 
HETATM 17 C C17 GBM . . . W 7 215.1 170.907 150.25 1 33.84 ? C17 GBM 2001 E 1 
HETATM 18 C C18 GBM . . . W 7 215.541 172.632 153.36 1 33.84 ? C18 GBM 2001 E 1 
HETATM 19 C C19 GBM . . . W 7 215.264 175.3 154.045 1 33.84 ? C19 GBM 2001 E 1 
HETATM 20 C C20 GBM . . . W 7 215.096 176.771 154.415 1 33.84 ? C20 GBM 2001 E 1 
HETATM 21 C C21 GBM . . . W 7 216.652 173.46 153.378 1 33.84 ? C21 GBM 2001 E 1 
HETATM 22 C C22 GBM . . . W 7 214.295 173.136 153.692 1 33.84 ? C22 GBM 2001 E 1 
HETATM 23 C C23 GBM . . . W 7 216.51 174.798 153.71 1 33.84 ? C23 GBM 2001 E 1 
HETATM 24 C C24 GBM . . . W 7 214.156 174.472 154.03 1 33.84 ? C24 GBM 2001 E 1 
HETATM 25 C C25 GBM . . . W 7 216.358 177.281 155.106 1 33.84 ? C25 GBM 2001 E 1 
HETATM 26 C C26 GBM . . . W 7 217.487 175.965 156.904 1 33.84 ? C26 GBM 2001 E 1 
HETATM 27 C C27 GBM . . . W 7 217.589 175.481 158.349 1 33.84 ? C27 GBM 2001 E 1 
HETATM 28 C C28 GBM . . . W 7 217.303 174.159 158.66 1 33.84 ? C28 GBM 2001 E 1 
HETATM 29 C C29 GBM . . . W 7 217.973 176.364 159.348 1 33.84 ? C29 GBM 2001 E 1 
HETATM 30 C C30 GBM . . . W 7 217.401 173.725 159.972 1 33.84 ? C30 GBM 2001 E 1 
HETATM 31 C C31 GBM . . . W 7 218.068 175.924 160.658 1 33.84 ? C31 GBM 2001 E 1 
HETATM 32 C C32 GBM . . . W 7 217.781 174.607 160.966 1 33.84 ? C32 GBM 2001 E 1 
HETATM 33 C C33 GBM . . . W 7 217.171 171.927 157.919 1 33.84 ? C33 GBM 2001 E 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    58 
_model_server_stats.query_time_ms           364 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           33 
#