data_7U24
#
_model_server_result.job_id            rNcl0utrkwZwnj5sM8XCcA 
_model_server_result.datetime_utc      '2024-11-05 19:43:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u24 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":2002}' 
#
_entry.id    7U24 
#
_exptl.entry_id    7U24 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7U24 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U24 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 K N N 
? 3 O N N 
? 3 S N N 
? 3 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 110 B CYS 110 1_555 B SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 110 D CYS 110 1_555 D SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 E ND2 ASN 10 E ASN 10 1_555 Y C1 NAG . E NAG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7U24 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 ATP A 1 401 401 ATP ATP . 
G 4 PTY A 1 402 506 PTY PTY . 
H 5 POV A 1 403 505 POV POV . 
I 6 P5S A 1 404 508 P5S P5S . 
J 6 P5S A 1 405 507 P5S P5S . 
K 3 ATP B 1 401 401 ATP ATP . 
L 5 POV B 1 402 505 POV POV . 
M 6 P5S B 1 403 506 P5S P5S . 
N 6 P5S B 1 404 507 P5S P5S . 
O 3 ATP C 1 401 401 ATP ATP . 
P 5 POV C 1 402 505 POV POV . 
Q 6 P5S C 1 403 506 P5S P5S . 
R 6 P5S D 1 401 507 P5S P5S . 
S 3 ATP D 1 402 401 ATP ATP . 
T 5 POV D 1 403 506 POV POV . 
U 6 P5S D 1 404 505 P5S P5S . 
V 6 P5S D 1 405 507 P5S P5S . 
W 7 GBM E 1 2001 2001 GBM GBM . 
X 3 ATP E 1 2002 2002 ATP ATP . 
Y 8 NAG E 1 2003 2101 NAG NAG . 
Z 4 PTY E 1 2004 2009 PTY PTY . 
AA 4 PTY E 1 2005 2003 PTY PTY . 
BA 4 PTY E 1 2006 2004 PTY PTY . 
CA 4 PTY E 1 2007 2008 PTY PTY . 
DA 6 P5S E 1 2008 2006 P5S P5S . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . X 3 233.717 182.513 105.529 1 85.75 ? PG ATP 2002 E 1 
HETATM 2 O O1G ATP . . . X 3 235.123 182.76 105.1 1 85.75 ? O1G ATP 2002 E 1 
HETATM 3 O O2G ATP . . . X 3 232.921 181.639 104.554 1 85.75 ? O2G ATP 2002 E 1 
HETATM 4 O O3G ATP . . . X 3 233.598 181.925 106.94 1 85.75 ? O3G ATP 2002 E 1 
HETATM 5 P PB ATP . . . X 3 232.081 184.86 104.644 1 85.75 ? PB ATP 2002 E 1 
HETATM 6 O O1B ATP . . . X 3 232.673 184.939 103.294 1 85.75 ? O1B ATP 2002 E 1 
HETATM 7 O O2B ATP . . . X 3 230.617 184.426 104.7 1 85.75 ? O2B ATP 2002 E 1 
HETATM 8 O O3B ATP . . . X 3 232.899 183.885 105.597 1 85.75 ? O3B ATP 2002 E 1 
HETATM 9 P PA ATP . . . X 3 231.884 187.772 105.116 1 85.75 ? PA ATP 2002 E 1 
HETATM 10 O O1A ATP . . . X 3 230.444 188.072 105.253 1 85.75 ? O1A ATP 2002 E 1 
HETATM 11 O O2A ATP . . . X 3 232.479 188.078 103.742 1 85.75 ? O2A ATP 2002 E 1 
HETATM 12 O O3A ATP . . . X 3 232.191 186.244 105.423 1 85.75 ? O3A ATP 2002 E 1 
HETATM 13 O O5' ATP . . . X 3 232.732 188.536 106.207 1 85.75 ? O5' ATP 2002 E 1 
HETATM 14 C C5' ATP . . . X 3 232.751 189.978 106.266 1 85.75 ? C5' ATP 2002 E 1 
HETATM 15 C C4' ATP . . . X 3 233.596 190.416 107.436 1 85.75 ? C4' ATP 2002 E 1 
HETATM 16 O O4' ATP . . . X 3 232.747 190.978 108.461 1 85.75 ? O4' ATP 2002 E 1 
HETATM 17 C C3' ATP . . . X 3 234.381 189.304 108.125 1 85.75 ? C3' ATP 2002 E 1 
HETATM 18 O O3' ATP . . . X 3 235.649 189.117 107.508 1 85.75 ? O3' ATP 2002 E 1 
HETATM 19 C C2' ATP . . . X 3 234.517 189.838 109.552 1 85.75 ? C2' ATP 2002 E 1 
HETATM 20 O O2' ATP . . . X 3 235.59 190.764 109.669 1 85.75 ? O2' ATP 2002 E 1 
HETATM 21 C C1' ATP . . . X 3 233.173 190.546 109.743 1 85.75 ? C1' ATP 2002 E 1 
HETATM 22 N N9 ATP . . . X 3 232.129 189.701 110.314 1 85.75 ? N9 ATP 2002 E 1 
HETATM 23 C C8 ATP . . . X 3 231.24 188.909 109.635 1 85.75 ? C8 ATP 2002 E 1 
HETATM 24 N N7 ATP . . . X 3 230.406 188.255 110.407 1 85.75 ? N7 ATP 2002 E 1 
HETATM 25 C C5 ATP . . . X 3 230.771 188.646 111.687 1 85.75 ? C5 ATP 2002 E 1 
HETATM 26 C C6 ATP . . . X 3 230.273 188.309 112.961 1 85.75 ? C6 ATP 2002 E 1 
HETATM 27 N N6 ATP . . . X 3 229.257 187.465 113.164 1 85.75 ? N6 ATP 2002 E 1 
HETATM 28 N N1 ATP . . . X 3 230.864 188.877 114.036 1 85.75 ? N1 ATP 2002 E 1 
HETATM 29 C C2 ATP . . . X 3 231.88 189.721 113.841 1 85.75 ? C2 ATP 2002 E 1 
HETATM 30 N N3 ATP . . . X 3 232.433 190.113 112.691 1 85.75 ? N3 ATP 2002 E 1 
HETATM 31 C C4 ATP . . . X 3 231.831 189.537 111.645 1 85.75 ? C4 ATP 2002 E 1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    48 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#