data_7U24
#
_model_server_result.job_id            rqBZUh-6Oaf2b2nQ1Irvew 
_model_server_result.datetime_utc      '2024-11-30 11:10:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u24 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Z","auth_seq_id":2004}' 
#
_entry.id    7U24 
#
_exptl.entry_id    7U24 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              734.039 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHOSPHATIDYLETHANOLAMINE 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7U24 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U24 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
? 4 CA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 110 B CYS 110 1_555 B SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 110 D CYS 110 1_555 D SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 E ND2 ASN 10 E ASN 10 1_555 Y C1 NAG . E NAG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C40 H80 N O8 P' 
_chem_comp.formula_weight    734.039 
_chem_comp.id                PTY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHOSPHATIDYLETHANOLAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O4 PTY sing 685 n n 
C1 C6 PTY sing 686 n n 
C1 HC11 PTY sing 687 n n 
C1 HC12 PTY sing 688 n n 
C2 C3 PTY sing 689 n n 
C2 N1 PTY sing 690 n n 
C2 HC21 PTY sing 691 n n 
C2 HC22 PTY sing 692 n n 
C3 O11 PTY sing 693 n n 
C3 HC31 PTY sing 694 n n 
C3 HC32 PTY sing 695 n n 
O4 C30 PTY sing 696 n n 
C5 C6 PTY sing 697 n n 
C5 O14 PTY sing 698 n n 
C5 HC51 PTY sing 699 n n 
C5 HC52 PTY sing 700 n n 
C6 O7 PTY sing 701 n n 
C6 HC6 PTY sing 702 n n 
O7 C8 PTY sing 703 n n 
C8 O10 PTY doub 704 n n 
C8 C11 PTY sing 705 n n 
C11 C12 PTY sing 706 n n 
C11 H111 PTY sing 707 n n 
C11 H112 PTY sing 708 n n 
C12 C13 PTY sing 709 n n 
C12 H121 PTY sing 710 n n 
C12 H122 PTY sing 711 n n 
C13 C14 PTY sing 712 n n 
C13 H131 PTY sing 713 n n 
C13 H132 PTY sing 714 n n 
C14 C15 PTY sing 715 n n 
C14 H141 PTY sing 716 n n 
C14 H142 PTY sing 717 n n 
C15 C16 PTY sing 718 n n 
C15 H151 PTY sing 719 n n 
C15 H152 PTY sing 720 n n 
C16 C17 PTY sing 721 n n 
C16 H161 PTY sing 722 n n 
C16 H162 PTY sing 723 n n 
C17 C18 PTY sing 724 n n 
C17 H171 PTY sing 725 n n 
C17 H172 PTY sing 726 n n 
C18 C19 PTY sing 727 n n 
C18 H181 PTY sing 728 n n 
C18 H182 PTY sing 729 n n 
C19 C20 PTY sing 730 n n 
C19 H191 PTY sing 731 n n 
C19 H192 PTY sing 732 n n 
C20 C21 PTY sing 733 n n 
C20 H201 PTY sing 734 n n 
C20 H202 PTY sing 735 n n 
C21 C22 PTY sing 736 n n 
C21 H211 PTY sing 737 n n 
C21 H212 PTY sing 738 n n 
C22 C23 PTY sing 739 n n 
C22 H221 PTY sing 740 n n 
C22 H222 PTY sing 741 n n 
C23 C24 PTY sing 742 n n 
C23 H231 PTY sing 743 n n 
C23 H232 PTY sing 744 n n 
C24 C25 PTY sing 745 n n 
C24 H241 PTY sing 746 n n 
C24 H242 PTY sing 747 n n 
C25 C26 PTY sing 748 n n 
C25 H251 PTY sing 749 n n 
C25 H252 PTY sing 750 n n 
C26 C27 PTY sing 751 n n 
C26 H261 PTY sing 752 n n 
C26 H262 PTY sing 753 n n 
C27 C28 PTY sing 754 n n 
C27 H271 PTY sing 755 n n 
C27 H272 PTY sing 756 n n 
C28 C29 PTY sing 757 n n 
C28 H281 PTY sing 758 n n 
C28 H282 PTY sing 759 n n 
C29 H291 PTY sing 760 n n 
C29 H292 PTY sing 761 n n 
C29 H293 PTY sing 762 n n 
C30 C31 PTY sing 763 n n 
C30 O30 PTY doub 764 n n 
C31 C32 PTY sing 765 n n 
C31 H311 PTY sing 766 n n 
C31 H312 PTY sing 767 n n 
C32 C33 PTY sing 768 n n 
C32 H321 PTY sing 769 n n 
C32 H322 PTY sing 770 n n 
C33 C34 PTY sing 771 n n 
C33 H331 PTY sing 772 n n 
C33 H332 PTY sing 773 n n 
C34 C35 PTY sing 774 n n 
C34 H341 PTY sing 775 n n 
C34 H342 PTY sing 776 n n 
C35 C36 PTY sing 777 n n 
C35 H351 PTY sing 778 n n 
C35 H352 PTY sing 779 n n 
C36 C37 PTY sing 780 n n 
C36 H361 PTY sing 781 n n 
C36 H362 PTY sing 782 n n 
C37 C38 PTY sing 783 n n 
C37 H371 PTY sing 784 n n 
C37 H372 PTY sing 785 n n 
C38 C39 PTY sing 786 n n 
C38 H381 PTY sing 787 n n 
C38 H382 PTY sing 788 n n 
C39 C40 PTY sing 789 n n 
C39 H391 PTY sing 790 n n 
C39 H392 PTY sing 791 n n 
C40 C41 PTY sing 792 n n 
C40 H401 PTY sing 793 n n 
C40 H402 PTY sing 794 n n 
C41 C42 PTY sing 795 n n 
C41 H411 PTY sing 796 n n 
C41 H412 PTY sing 797 n n 
C42 C43 PTY sing 798 n n 
C42 H421 PTY sing 799 n n 
C42 H422 PTY sing 800 n n 
C43 C44 PTY sing 801 n n 
C43 H431 PTY sing 802 n n 
C43 H432 PTY sing 803 n n 
C44 H441 PTY sing 804 n n 
C44 H442 PTY sing 805 n n 
C44 H443 PTY sing 806 n n 
P1 O11 PTY sing 807 n n 
P1 O12 PTY sing 808 n n 
P1 O13 PTY doub 809 n n 
P1 O14 PTY sing 810 n n 
O12 H12O PTY sing 811 n n 
N1 HN11 PTY sing 812 n n 
N1 HN12 PTY sing 813 n n 
#
_atom_sites.entry_id                     7U24 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 ATP A 1 401 401 ATP ATP . 
G 4 PTY A 1 402 506 PTY PTY . 
H 5 POV A 1 403 505 POV POV . 
I 6 P5S A 1 404 508 P5S P5S . 
J 6 P5S A 1 405 507 P5S P5S . 
K 3 ATP B 1 401 401 ATP ATP . 
L 5 POV B 1 402 505 POV POV . 
M 6 P5S B 1 403 506 P5S P5S . 
N 6 P5S B 1 404 507 P5S P5S . 
O 3 ATP C 1 401 401 ATP ATP . 
P 5 POV C 1 402 505 POV POV . 
Q 6 P5S C 1 403 506 P5S P5S . 
R 6 P5S D 1 401 507 P5S P5S . 
S 3 ATP D 1 402 401 ATP ATP . 
T 5 POV D 1 403 506 POV POV . 
U 6 P5S D 1 404 505 P5S P5S . 
V 6 P5S D 1 405 507 P5S P5S . 
W 7 GBM E 1 2001 2001 GBM GBM . 
X 3 ATP E 1 2002 2002 ATP ATP . 
Y 8 NAG E 1 2003 2101 NAG NAG . 
Z 4 PTY E 1 2004 2009 PTY PTY . 
AA 4 PTY E 1 2005 2003 PTY PTY . 
BA 4 PTY E 1 2006 2004 PTY PTY . 
CA 4 PTY E 1 2007 2008 PTY PTY . 
DA 6 P5S E 1 2008 2006 P5S P5S . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PTY . . . Z 4 186.141 163.183 159.251 1 39.67 ? C1 PTY 2004 E 1 
HETATM 2 C C2 PTY . . . Z 4 184.566 164.935 151.497 1 39.67 ? C2 PTY 2004 E 1 
HETATM 3 C C3 PTY . . . Z 4 185.621 164.417 152.448 1 39.67 ? C3 PTY 2004 E 1 
HETATM 4 O O4 PTY . . . Z 4 186.137 163.663 160.595 1 39.67 ? O4 PTY 2004 E 1 
HETATM 5 C C5 PTY . . . Z 4 186.052 163.94 156.874 1 39.67 ? C5 PTY 2004 E 1 
HETATM 6 C C6 PTY . . . Z 4 186.177 164.375 158.321 1 39.67 ? C6 PTY 2004 E 1 
HETATM 7 O O7 PTY . . . Z 4 187.423 165.04 158.554 1 39.67 ? O7 PTY 2004 E 1 
HETATM 8 C C8 PTY . . . Z 4 187.447 166.172 159.255 1 39.67 ? C8 PTY 2004 E 1 
HETATM 9 O O10 PTY . . . Z 4 187.42 166.191 160.458 1 39.67 ? O10 PTY 2004 E 1 
HETATM 10 C C11 PTY . . . Z 4 187.478 167.363 158.333 1 39.67 ? C11 PTY 2004 E 1 
HETATM 11 C C12 PTY . . . Z 4 188.383 168.556 158.64 1 39.67 ? C12 PTY 2004 E 1 
HETATM 12 C C13 PTY . . . Z 4 188.502 169.008 160.093 1 39.67 ? C13 PTY 2004 E 1 
HETATM 13 C C14 PTY . . . Z 4 189.653 168.339 160.836 1 39.67 ? C14 PTY 2004 E 1 
HETATM 14 C C15 PTY . . . Z 4 189.356 168.023 162.295 1 39.67 ? C15 PTY 2004 E 1 
HETATM 15 C C16 PTY . . . Z 4 190.615 167.905 163.144 1 39.67 ? C16 PTY 2004 E 1 
HETATM 16 C C17 PTY . . . Z 4 190.886 169.12 164.02 1 39.67 ? C17 PTY 2004 E 1 
HETATM 17 C C18 PTY . . . Z 4 191.979 168.86 165.049 1 39.67 ? C18 PTY 2004 E 1 
HETATM 18 C C19 PTY . . . Z 4 191.942 169.8 166.247 1 39.67 ? C19 PTY 2004 E 1 
HETATM 19 C C20 PTY . . . Z 4 192.523 169.164 167.504 1 39.67 ? C20 PTY 2004 E 1 
HETATM 20 C C30 PTY . . . Z 4 186.962 163.076 161.461 1 39.67 ? C30 PTY 2004 E 1 
HETATM 21 C C31 PTY . . . Z 4 187.216 163.943 162.663 1 39.67 ? C31 PTY 2004 E 1 
HETATM 22 O O30 PTY . . . Z 4 187.434 161.983 161.279 1 39.67 ? O30 PTY 2004 E 1 
HETATM 23 C C32 PTY . . . Z 4 187.714 163.18 163.879 1 39.67 ? C32 PTY 2004 E 1 
HETATM 24 C C33 PTY . . . Z 4 187.989 164.107 165.057 1 39.67 ? C33 PTY 2004 E 1 
HETATM 25 C C34 PTY . . . Z 4 188.87 163.461 166.117 1 39.67 ? C34 PTY 2004 E 1 
HETATM 26 C C35 PTY . . . Z 4 188.976 164.278 167.398 1 39.67 ? C35 PTY 2004 E 1 
HETATM 27 P P1 PTY . . . Z 4 186.803 165.126 154.672 1 39.67 ? P1 PTY 2004 E 1 
HETATM 28 O O11 PTY . . . Z 4 185.494 165.094 153.69 1 39.67 ? O11 PTY 2004 E 1 
HETATM 29 O O12 PTY . . . Z 4 187.593 163.862 154.524 1 39.67 ? O12 PTY 2004 E 1 
HETATM 30 O O13 PTY . . . Z 4 187.5 166.448 154.579 1 39.67 ? O13 PTY 2004 E 1 
HETATM 31 O O14 PTY . . . Z 4 185.894 165.068 156.043 1 39.67 ? O14 PTY 2004 E 1 
HETATM 32 N N1 PTY . . . Z 4 184.553 164.174 150.258 1 39.67 ? N1 PTY 2004 E 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           32 
#