data_7U24
#
_model_server_result.job_id            jeYLSMCLUL6oDUnJKfbGJA 
_model_server_result.datetime_utc      '2024-11-05 19:54:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u24 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Z","auth_seq_id":2004}' 
#
_entry.id    7U24 
#
_exptl.entry_id    7U24 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              734.039 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHOSPHATIDYLETHANOLAMINE 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7U24 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U24 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
? 4 CA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 110 B CYS 110 1_555 B SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 110 D CYS 110 1_555 D SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 E ND2 ASN 10 E ASN 10 1_555 Y C1 NAG . E NAG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C40 H80 N O8 P' 
_chem_comp.formula_weight    734.039 
_chem_comp.id                PTY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHOSPHATIDYLETHANOLAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7U24 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 ATP A 1 401 401 ATP ATP . 
G 4 PTY A 1 402 506 PTY PTY . 
H 5 POV A 1 403 505 POV POV . 
I 6 P5S A 1 404 508 P5S P5S . 
J 6 P5S A 1 405 507 P5S P5S . 
K 3 ATP B 1 401 401 ATP ATP . 
L 5 POV B 1 402 505 POV POV . 
M 6 P5S B 1 403 506 P5S P5S . 
N 6 P5S B 1 404 507 P5S P5S . 
O 3 ATP C 1 401 401 ATP ATP . 
P 5 POV C 1 402 505 POV POV . 
Q 6 P5S C 1 403 506 P5S P5S . 
R 6 P5S D 1 401 507 P5S P5S . 
S 3 ATP D 1 402 401 ATP ATP . 
T 5 POV D 1 403 506 POV POV . 
U 6 P5S D 1 404 505 P5S P5S . 
V 6 P5S D 1 405 507 P5S P5S . 
W 7 GBM E 1 2001 2001 GBM GBM . 
X 3 ATP E 1 2002 2002 ATP ATP . 
Y 8 NAG E 1 2003 2101 NAG NAG . 
Z 4 PTY E 1 2004 2009 PTY PTY . 
AA 4 PTY E 1 2005 2003 PTY PTY . 
BA 4 PTY E 1 2006 2004 PTY PTY . 
CA 4 PTY E 1 2007 2008 PTY PTY . 
DA 6 P5S E 1 2008 2006 P5S P5S . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PTY . . . Z 4 186.141 163.183 159.251 1 39.67 ? C1 PTY 2004 E 1 
HETATM 2 C C2 PTY . . . Z 4 184.566 164.935 151.497 1 39.67 ? C2 PTY 2004 E 1 
HETATM 3 C C3 PTY . . . Z 4 185.621 164.417 152.448 1 39.67 ? C3 PTY 2004 E 1 
HETATM 4 O O4 PTY . . . Z 4 186.137 163.663 160.595 1 39.67 ? O4 PTY 2004 E 1 
HETATM 5 C C5 PTY . . . Z 4 186.052 163.94 156.874 1 39.67 ? C5 PTY 2004 E 1 
HETATM 6 C C6 PTY . . . Z 4 186.177 164.375 158.321 1 39.67 ? C6 PTY 2004 E 1 
HETATM 7 O O7 PTY . . . Z 4 187.423 165.04 158.554 1 39.67 ? O7 PTY 2004 E 1 
HETATM 8 C C8 PTY . . . Z 4 187.447 166.172 159.255 1 39.67 ? C8 PTY 2004 E 1 
HETATM 9 O O10 PTY . . . Z 4 187.42 166.191 160.458 1 39.67 ? O10 PTY 2004 E 1 
HETATM 10 C C11 PTY . . . Z 4 187.478 167.363 158.333 1 39.67 ? C11 PTY 2004 E 1 
HETATM 11 C C12 PTY . . . Z 4 188.383 168.556 158.64 1 39.67 ? C12 PTY 2004 E 1 
HETATM 12 C C13 PTY . . . Z 4 188.502 169.008 160.093 1 39.67 ? C13 PTY 2004 E 1 
HETATM 13 C C14 PTY . . . Z 4 189.653 168.339 160.836 1 39.67 ? C14 PTY 2004 E 1 
HETATM 14 C C15 PTY . . . Z 4 189.356 168.023 162.295 1 39.67 ? C15 PTY 2004 E 1 
HETATM 15 C C16 PTY . . . Z 4 190.615 167.905 163.144 1 39.67 ? C16 PTY 2004 E 1 
HETATM 16 C C17 PTY . . . Z 4 190.886 169.12 164.02 1 39.67 ? C17 PTY 2004 E 1 
HETATM 17 C C18 PTY . . . Z 4 191.979 168.86 165.049 1 39.67 ? C18 PTY 2004 E 1 
HETATM 18 C C19 PTY . . . Z 4 191.942 169.8 166.247 1 39.67 ? C19 PTY 2004 E 1 
HETATM 19 C C20 PTY . . . Z 4 192.523 169.164 167.504 1 39.67 ? C20 PTY 2004 E 1 
HETATM 20 C C30 PTY . . . Z 4 186.962 163.076 161.461 1 39.67 ? C30 PTY 2004 E 1 
HETATM 21 C C31 PTY . . . Z 4 187.216 163.943 162.663 1 39.67 ? C31 PTY 2004 E 1 
HETATM 22 O O30 PTY . . . Z 4 187.434 161.983 161.279 1 39.67 ? O30 PTY 2004 E 1 
HETATM 23 C C32 PTY . . . Z 4 187.714 163.18 163.879 1 39.67 ? C32 PTY 2004 E 1 
HETATM 24 C C33 PTY . . . Z 4 187.989 164.107 165.057 1 39.67 ? C33 PTY 2004 E 1 
HETATM 25 C C34 PTY . . . Z 4 188.87 163.461 166.117 1 39.67 ? C34 PTY 2004 E 1 
HETATM 26 C C35 PTY . . . Z 4 188.976 164.278 167.398 1 39.67 ? C35 PTY 2004 E 1 
HETATM 27 P P1 PTY . . . Z 4 186.803 165.126 154.672 1 39.67 ? P1 PTY 2004 E 1 
HETATM 28 O O11 PTY . . . Z 4 185.494 165.094 153.69 1 39.67 ? O11 PTY 2004 E 1 
HETATM 29 O O12 PTY . . . Z 4 187.593 163.862 154.524 1 39.67 ? O12 PTY 2004 E 1 
HETATM 30 O O13 PTY . . . Z 4 187.5 166.448 154.579 1 39.67 ? O13 PTY 2004 E 1 
HETATM 31 O O14 PTY . . . Z 4 185.894 165.068 156.043 1 39.67 ? O14 PTY 2004 E 1 
HETATM 32 N N1 PTY . . . Z 4 184.553 164.174 150.258 1 39.67 ? N1 PTY 2004 E 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    70 
_model_server_stats.query_time_ms           380 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           32 
#