data_7U24 # _model_server_result.job_id Asner1Tp5I0BOdEo6GgCoA _model_server_result.datetime_utc '2024-11-05 19:39:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u24 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 7U24 # _exptl.entry_id 7U24 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U24 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U24 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 K N N ? 3 O N N ? 3 S N N ? 3 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 B SG CYS 110 B CYS 110 1_555 B SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 D SG CYS 110 D CYS 110 1_555 D SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 E ND2 ASN 10 E ASN 10 1_555 Y C1 NAG . E NAG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7U24 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 ATP A 1 401 401 ATP ATP . G 4 PTY A 1 402 506 PTY PTY . H 5 POV A 1 403 505 POV POV . I 6 P5S A 1 404 508 P5S P5S . J 6 P5S A 1 405 507 P5S P5S . K 3 ATP B 1 401 401 ATP ATP . L 5 POV B 1 402 505 POV POV . M 6 P5S B 1 403 506 P5S P5S . N 6 P5S B 1 404 507 P5S P5S . O 3 ATP C 1 401 401 ATP ATP . P 5 POV C 1 402 505 POV POV . Q 6 P5S C 1 403 506 P5S P5S . R 6 P5S D 1 401 507 P5S P5S . S 3 ATP D 1 402 401 ATP ATP . T 5 POV D 1 403 506 POV POV . U 6 P5S D 1 404 505 P5S P5S . V 6 P5S D 1 405 507 P5S P5S . W 7 GBM E 1 2001 2001 GBM GBM . X 3 ATP E 1 2002 2002 ATP ATP . Y 8 NAG E 1 2003 2101 NAG NAG . Z 4 PTY E 1 2004 2009 PTY PTY . AA 4 PTY E 1 2005 2003 PTY PTY . BA 4 PTY E 1 2006 2004 PTY PTY . CA 4 PTY E 1 2007 2008 PTY PTY . DA 6 P5S E 1 2008 2006 P5S P5S . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . F 3 180.693 132.819 136.4 1 30.82 ? PG ATP 401 A 1 HETATM 2 O O1G ATP . . . F 3 180.076 132.448 137.705 1 30.82 ? O1G ATP 401 A 1 HETATM 3 O O2G ATP . . . F 3 182.145 133.295 136.519 1 30.82 ? O2G ATP 401 A 1 HETATM 4 O O3G ATP . . . F 3 179.888 133.858 135.614 1 30.82 ? O3G ATP 401 A 1 HETATM 5 P PB ATP . . . F 3 179.806 130.631 134.55 1 30.82 ? PB ATP 401 A 1 HETATM 6 O O1B ATP . . . F 3 180.561 129.814 133.58 1 30.82 ? O1B ATP 401 A 1 HETATM 7 O O2B ATP . . . F 3 178.907 129.858 135.515 1 30.82 ? O2B ATP 401 A 1 HETATM 8 O O3B ATP . . . F 3 180.765 131.548 135.43 1 30.82 ? O3B ATP 401 A 1 HETATM 9 P PA ATP . . . F 3 177.547 131.713 132.973 1 30.82 ? PA ATP 401 A 1 HETATM 10 O O1A ATP . . . F 3 177.773 132.184 131.592 1 30.82 ? O1A ATP 401 A 1 HETATM 11 O O2A ATP . . . F 3 176.945 130.313 133.088 1 30.82 ? O2A ATP 401 A 1 HETATM 12 O O3A ATP . . . F 3 178.894 131.713 133.821 1 30.82 ? O3A ATP 401 A 1 HETATM 13 O O5' ATP . . . F 3 176.63 132.719 133.773 1 30.82 ? O5' ATP 401 A 1 HETATM 14 C C5' ATP . . . F 3 177.058 134.07 134.042 1 30.82 ? C5' ATP 401 A 1 HETATM 15 C C4' ATP . . . F 3 176.101 134.703 135.02 1 30.82 ? C4' ATP 401 A 1 HETATM 16 O O4' ATP . . . F 3 174.96 133.835 135.21 1 30.82 ? O4' ATP 401 A 1 HETATM 17 C C3' ATP . . . F 3 176.668 134.958 136.414 1 30.82 ? C3' ATP 401 A 1 HETATM 18 O O3' ATP . . . F 3 176.108 136.135 136.986 1 30.82 ? O3' ATP 401 A 1 HETATM 19 C C2' ATP . . . F 3 176.25 133.702 137.18 1 30.82 ? C2' ATP 401 A 1 HETATM 20 O O2' ATP . . . F 3 176.125 133.951 138.575 1 30.82 ? O2' ATP 401 A 1 HETATM 21 C C1' ATP . . . F 3 174.88 133.423 136.562 1 30.82 ? C1' ATP 401 A 1 HETATM 22 N N9 ATP . . . F 3 174.484 132.019 136.591 1 30.82 ? N9 ATP 401 A 1 HETATM 23 C C8 ATP . . . F 3 174.862 131.035 135.715 1 30.82 ? C8 ATP 401 A 1 HETATM 24 N N7 ATP . . . F 3 174.351 129.857 135.98 1 30.82 ? N7 ATP 401 A 1 HETATM 25 C C5 ATP . . . F 3 173.58 130.082 137.111 1 30.82 ? C5 ATP 401 A 1 HETATM 26 C C6 ATP . . . F 3 172.775 129.235 137.896 1 30.82 ? C6 ATP 401 A 1 HETATM 27 N N6 ATP . . . F 3 172.607 127.931 137.651 1 30.82 ? N6 ATP 401 A 1 HETATM 28 N N1 ATP . . . F 3 172.14 129.777 138.958 1 30.82 ? N1 ATP 401 A 1 HETATM 29 C C2 ATP . . . F 3 172.305 131.078 139.21 1 30.82 ? C2 ATP 401 A 1 HETATM 30 N N3 ATP . . . F 3 173.036 131.973 138.542 1 30.82 ? N3 ATP 401 A 1 HETATM 31 C C4 ATP . . . F 3 173.652 131.411 137.498 1 30.82 ? C4 ATP 401 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 31 #