data_7U24
#
_model_server_result.job_id            PiePjwx6Ah5VswrdBc6HDA 
_model_server_result.datetime_utc      '2024-11-05 19:32:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u24 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":402}' 
#
_entry.id    7U24 
#
_exptl.entry_id    7U24 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7U24 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U24 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 L N N 
? 5 P N N 
? 5 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 110 B CYS 110 1_555 B SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 D SG CYS 110 D CYS 110 1_555 D SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 E SG CYS 6 E CYS 6 1_555 E SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 E ND2 ASN 10 E ASN 10 1_555 Y C1 NAG . E NAG 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
_atom_sites.entry_id                     7U24 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 ATP A 1 401 401 ATP ATP . 
G 4 PTY A 1 402 506 PTY PTY . 
H 5 POV A 1 403 505 POV POV . 
I 6 P5S A 1 404 508 P5S P5S . 
J 6 P5S A 1 405 507 P5S P5S . 
K 3 ATP B 1 401 401 ATP ATP . 
L 5 POV B 1 402 505 POV POV . 
M 6 P5S B 1 403 506 P5S P5S . 
N 6 P5S B 1 404 507 P5S P5S . 
O 3 ATP C 1 401 401 ATP ATP . 
P 5 POV C 1 402 505 POV POV . 
Q 6 P5S C 1 403 506 P5S P5S . 
R 6 P5S D 1 401 507 P5S P5S . 
S 3 ATP D 1 402 401 ATP ATP . 
T 5 POV D 1 403 506 POV POV . 
U 6 P5S D 1 404 505 P5S P5S . 
V 6 P5S D 1 405 507 P5S P5S . 
W 7 GBM E 1 2001 2001 GBM GBM . 
X 3 ATP E 1 2002 2002 ATP ATP . 
Y 8 NAG E 1 2003 2101 NAG NAG . 
Z 4 PTY E 1 2004 2009 PTY PTY . 
AA 4 PTY E 1 2005 2003 PTY PTY . 
BA 4 PTY E 1 2006 2004 PTY PTY . 
CA 4 PTY E 1 2007 2008 PTY PTY . 
DA 6 P5S E 1 2008 2006 P5S P5S . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N POV . . . L 5 142.849 175.323 193.053 1 33.69 ? N POV 402 B 1 
HETATM 2 P P POV . . . L 5 141.894 176.162 188.204 1 33.69 ? P POV 402 B 1 
HETATM 3 C C1 POV . . . L 5 143.593 177.334 186.568 1 33.69 ? C1 POV 402 B 1 
HETATM 4 C C2 POV . . . L 5 143.285 178.333 185.449 1 33.69 ? C2 POV 402 B 1 
HETATM 5 C C3 POV . . . L 5 141.864 178.208 184.953 1 33.69 ? C3 POV 402 B 1 
HETATM 6 C C210 POV . . . L 5 151.951 176.481 177.546 1 33.69 ? C210 POV 402 B 1 
HETATM 7 C C11 POV . . . L 5 141.693 175.591 190.75 1 33.69 ? C11 POV 402 B 1 
HETATM 8 O O11 POV . . . L 5 142.61 177.474 187.568 1 33.69 ? O11 POV 402 B 1 
HETATM 9 C C12 POV . . . L 5 142.71 174.885 191.618 1 33.69 ? C12 POV 402 B 1 
HETATM 10 O O12 POV . . . L 5 142.29 176.429 189.79 1 33.69 ? O12 POV 402 B 1 
HETATM 11 C C13 POV . . . L 5 141.834 174.662 193.919 1 33.69 ? C13 POV 402 B 1 
HETATM 12 O O13 POV . . . L 5 140.415 176.354 188.057 1 33.69 ? O13 POV 402 B 1 
HETATM 13 C C14 POV . . . L 5 144.208 174.915 193.505 1 33.69 ? C14 POV 402 B 1 
HETATM 14 O O14 POV . . . L 5 142.558 174.91 187.733 1 33.69 ? O14 POV 402 B 1 
HETATM 15 C C15 POV . . . L 5 142.739 176.803 193.203 1 33.69 ? C15 POV 402 B 1 
HETATM 16 C C21 POV . . . L 5 145.428 178.446 184.392 1 33.69 ? C21 POV 402 B 1 
HETATM 17 O O21 POV . . . L 5 144.131 178.156 184.312 1 33.69 ? O21 POV 402 B 1 
HETATM 18 C C22 POV . . . L 5 146.176 177.879 183.217 1 33.69 ? C22 POV 402 B 1 
HETATM 19 O O22 POV . . . L 5 145.919 179.086 185.287 1 33.69 ? O22 POV 402 B 1 
HETATM 20 C C23 POV . . . L 5 147.645 177.596 183.485 1 33.69 ? C23 POV 402 B 1 
HETATM 21 C C24 POV . . . L 5 148.542 178.371 182.529 1 33.69 ? C24 POV 402 B 1 
HETATM 22 C C25 POV . . . L 5 149.868 177.678 182.245 1 33.69 ? C25 POV 402 B 1 
HETATM 23 C C26 POV . . . L 5 149.715 176.459 181.346 1 33.69 ? C26 POV 402 B 1 
HETATM 24 C C27 POV . . . L 5 151.014 175.69 181.147 1 33.69 ? C27 POV 402 B 1 
HETATM 25 C C28 POV . . . L 5 151.254 175.302 179.687 1 33.69 ? C28 POV 402 B 1 
HETATM 26 C C29 POV . . . L 5 151.615 176.479 178.836 1 33.69 ? C29 POV 402 B 1 
HETATM 27 C C31 POV . . . L 5 140.827 178.335 182.844 1 33.69 ? C31 POV 402 B 1 
HETATM 28 O O31 POV . . . L 5 141.764 178.795 183.663 1 33.69 ? O31 POV 402 B 1 
HETATM 29 C C32 POV . . . L 5 141.317 178.299 181.425 1 33.69 ? C32 POV 402 B 1 
HETATM 30 O O32 POV . . . L 5 139.732 177.993 183.216 1 33.69 ? O32 POV 402 B 1 
HETATM 31 C C33 POV . . . L 5 140.258 177.893 180.416 1 33.69 ? C33 POV 402 B 1 
HETATM 32 C C34 POV . . . L 5 140.597 178.365 179.007 1 33.69 ? C34 POV 402 B 1 
HETATM 33 C C35 POV . . . L 5 142.084 178.492 178.705 1 33.69 ? C35 POV 402 B 1 
HETATM 34 C C36 POV . . . L 5 142.373 178.37 177.214 1 33.69 ? C36 POV 402 B 1 
HETATM 35 C C37 POV . . . L 5 143.854 178.404 176.862 1 33.69 ? C37 POV 402 B 1 
HETATM 36 C C38 POV . . . L 5 144.096 178.387 175.358 1 33.69 ? C38 POV 402 B 1 
#
_model_server_stats.io_time_ms              34 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           345 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           36 
#