data_7U25 # _model_server_result.job_id ihnXIJ4xVbsOS7dExgegvQ _model_server_result.datetime_utc '2024-11-24 04:54:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u25 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 7U25 # _exptl.entry_id 7U25 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.29 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7U25 _cell.length_a 179.952 _cell.length_b 179.952 _cell.length_c 185.472 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U25 _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 89.976 -155.843003 -61.824 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 453 A ASP 538 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc2 A OD1 ASN 480 A ASN 565 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc3 A O HIS 482 A HIS 567 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc4 B MG MG . A MG 701 1_555 E O13 TZD . A TZD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc5 B MG MG . A MG 701 1_555 E O23 TZD . A TZD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? # _chem_comp.formula 'C8 H17 N O3 S' _chem_comp.formula_weight 207.29 _chem_comp.id NHE _chem_comp.mon_nstd_flag . _chem_comp.name '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-CYCLOHEXYLTAURINE;CHES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3' C2' NHE sing 377 n n C3' C4' NHE sing 378 n n C3' "H3'1" NHE sing 379 n n C3' "H3'2" NHE sing 380 n n C2' C1' NHE sing 381 n n C2' "H2'1" NHE sing 382 n n C2' "H2'2" NHE sing 383 n n C1' C6' NHE sing 384 n n C1' N NHE sing 385 n n C1' "HC'1" NHE sing 386 n n C6' C5' NHE sing 387 n n C6' "H6'1" NHE sing 388 n n C6' "H6'2" NHE sing 389 n n N C1 NHE sing 390 n n N HN NHE sing 391 n n C1 C2 NHE sing 392 n n C1 HC11 NHE sing 393 n n C1 HC12 NHE sing 394 n n C2 S NHE sing 395 n n C2 HC21 NHE sing 396 n n C2 HC22 NHE sing 397 n n S O1 NHE doub 398 n n S O2 NHE doub 399 n n S O3 NHE sing 400 n n O3 HO3 NHE sing 401 n n C5' C4' NHE sing 402 n n C5' "H5'1" NHE sing 403 n n C5' "H5'2" NHE sing 404 n n C4' "H4'1" NHE sing 405 n n C4' "H4'2" NHE sing 406 n n # _atom_sites.entry_id 7U25 _atom_sites.fract_transf_matrix[1][1] 0.005557 _atom_sites.fract_transf_matrix[1][2] 0.003208 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006417 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005392 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 701 701 MG MG . C 3 6QL A 1 702 801 6QL 6QL . D 4 FAD A 1 703 1201 FAD FAD . E 5 TZD A 1 704 1301 TZD TZD . F 6 NHE A 1 705 1701 NHE NHE . G 7 SO4 A 1 706 1801 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3' NHE . . . F 6 43.021 -65.887 -19.095 0.92 51.39 ? C3' NHE 705 A 1 HETATM 2 C C2' NHE . . . F 6 42.23 -65.487 -20.338 0.92 71.96 ? C2' NHE 705 A 1 HETATM 3 C C1' NHE . . . F 6 41.586 -66.691 -21.044 0.92 86.25 ? C1' NHE 705 A 1 HETATM 4 C C6' NHE . . . F 6 41.656 -67.981 -20.217 0.92 74.42 ? C6' NHE 705 A 1 HETATM 5 N N NHE . . . F 6 40.177 -66.44 -21.399 0.92 84.07 ? N NHE 705 A 1 HETATM 6 C C1 NHE . . . F 6 39.579 -65.337 -20.661 0.92 73.84 ? C1 NHE 705 A 1 HETATM 7 C C2 NHE . . . F 6 38.916 -65.84 -19.378 0.92 67.82 ? C2 NHE 705 A 1 HETATM 8 S S NHE . . . F 6 37.111 -65.854 -19.561 0.92 91.64 ? S NHE 705 A 1 HETATM 9 O O1 NHE . . . F 6 36.573 -67.263 -19.483 0.92 67.7 ? O1 NHE 705 A 1 HETATM 10 O O2 NHE . . . F 6 36.686 -65.453 -20.953 0.92 90.67 ? O2 NHE 705 A 1 HETATM 11 O O3 NHE . . . F 6 36.484 -64.969 -18.51 0.92 97.92 -1 O3 NHE 705 A 1 HETATM 12 C C5' NHE . . . F 6 43.077 -68.333 -19.776 0.92 63.23 ? C5' NHE 705 A 1 HETATM 13 C C4' NHE . . . F 6 43.899 -67.108 -19.369 0.92 66.31 ? C4' NHE 705 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #