data_7U2F # _model_server_result.job_id 9bccY4WHZnUWzdrF5rHzYw _model_server_result.datetime_utc '2024-11-14 10:42:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u2f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7U2F # _exptl.entry_id 7U2F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7U2F _cell.length_a 49.172 _cell.length_b 49.172 _cell.length_c 261.961 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U2F _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 26 A CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 A O ALA 1 A ALA 1 1_555 D CU CU . A CU 203 8_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc2 A O GLY 45 A GLY 45 1_555 B CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc3 A ND1 HIS 46 A HIS 46 1_555 B CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc4 A NE2 HIS 83 A HIS 83 1_555 D CU CU . A CU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc5 A SG CYS 112 A CYS 112 1_555 B CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc6 A ND1 HIS 117 A HIS 117 1_555 B CU CU . A CU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc7 C N TRS . A TRS 202 1_555 D CU CU . A CU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? metalc ? metalc8 C O3 TRS . A TRS 202 1_555 D CU CU . A CU 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 7U2F _atom_sites.fract_transf_matrix[1][1] 0.020337 _atom_sites.fract_transf_matrix[1][2] 0.011741 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003817 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 201 130 CU CU . C 3 TRS A 1 202 131 TRS TRS . D 2 CU A 1 203 1 CU CU . E 4 HOH A 1 301 25 HOH HOH . E 4 HOH A 2 302 7 HOH HOH . E 4 HOH A 3 303 24 HOH HOH . E 4 HOH A 4 304 28 HOH HOH . E 4 HOH A 5 305 8 HOH HOH . E 4 HOH A 6 306 32 HOH HOH . E 4 HOH A 7 307 5 HOH HOH . E 4 HOH A 8 308 6 HOH HOH . E 4 HOH A 9 309 30 HOH HOH . E 4 HOH A 10 310 31 HOH HOH . E 4 HOH A 11 311 1 HOH HOH . E 4 HOH A 12 312 3 HOH HOH . E 4 HOH A 13 313 4 HOH HOH . E 4 HOH A 14 314 10 HOH HOH . E 4 HOH A 15 315 19 HOH HOH . E 4 HOH A 16 316 16 HOH HOH . E 4 HOH A 17 317 12 HOH HOH . E 4 HOH A 18 318 14 HOH HOH . E 4 HOH A 19 319 2 HOH HOH . E 4 HOH A 20 320 15 HOH HOH . E 4 HOH A 21 321 23 HOH HOH . E 4 HOH A 22 322 26 HOH HOH . E 4 HOH A 23 323 18 HOH HOH . E 4 HOH A 24 324 22 HOH HOH . E 4 HOH A 25 325 9 HOH HOH . E 4 HOH A 26 326 13 HOH HOH . E 4 HOH A 27 327 17 HOH HOH . E 4 HOH A 28 328 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 3 14.133 -22.798 5.964 1 75.45 ? C TRS 202 A 1 HETATM 2 C C1 TRS . . . C 3 14.441 -22.619 7.448 1 71.16 ? C1 TRS 202 A 1 HETATM 3 C C2 TRS . . . C 3 14.712 -24.11 5.448 1 66.84 ? C2 TRS 202 A 1 HETATM 4 C C3 TRS . . . C 3 14.722 -21.653 5.142 1 64.01 ? C3 TRS 202 A 1 HETATM 5 N N TRS . . . C 3 12.673 -22.832 5.797 1 59.12 ? N TRS 202 A 1 HETATM 6 O O1 TRS . . . C 3 15.833 -22.596 7.654 1 64.27 ? O1 TRS 202 A 1 HETATM 7 O O2 TRS . . . C 3 16.073 -23.92 5.138 1 63.61 ? O2 TRS 202 A 1 HETATM 8 O O3 TRS . . . C 3 13.993 -20.461 5.334 1 66.35 ? O3 TRS 202 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 8 #