data_7U2P # _model_server_result.job_id bMa3eI_drTxhQuXKCHjunQ _model_server_result.datetime_utc '2024-12-04 16:48:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u2p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":603}' # _entry.id 7U2P # _exptl.entry_id 7U2P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U2P _cell.length_a 114.641 _cell.length_b 122.798 _cell.length_c 127.474 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U2P _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 288 A ASP 287 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc2 A OE1 GLU 515 A GLU 514 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.917 ? metalc ? metalc3 C O1A UPG . A UPG 601 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? metalc ? metalc4 C O1B UPG . A UPG 601 1_555 D MN MN . A MN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.902 ? metalc ? metalc5 D MN MN . A MN 602 1_555 H O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc6 D MN MN . A MN 602 1_555 H O HOH . A HOH 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc7 B OG1 THR 24 B THR 19 1_555 G MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc8 F O3B GDP . B GDP 201 1_555 G MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? metalc ? metalc9 G MG MG . B MG 202 1_555 I O HOH . B HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc10 G MG MG . B MG 202 1_555 I O HOH . B HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc11 G MG MG . B MG 202 1_555 I O HOH . B HOH 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc12 G MG MG . B MG 202 1_555 I O HOH . B HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 335 n n S O2 SO4 doub 336 n n S O3 SO4 sing 337 n n S O4 SO4 sing 338 n n # _atom_sites.entry_id 7U2P _atom_sites.fract_transf_matrix[1][1] 0.008723 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008143 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007845 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 UPG A 1 601 601 UPG UPG . D 4 MN A 1 602 551 MN MN . E 5 SO4 A 1 603 1 SO4 SO4 . F 6 GDP B 1 201 201 GDP GDP . G 7 MG B 1 202 1 MG MG . H 8 HOH A 1 701 40 HOH HOH . H 8 HOH A 2 702 24 HOH HOH . H 8 HOH A 3 703 14 HOH HOH . H 8 HOH A 4 704 49 HOH HOH . H 8 HOH A 5 705 31 HOH HOH . H 8 HOH A 6 706 11 HOH HOH . H 8 HOH A 7 707 1 HOH HOH . H 8 HOH A 8 708 9 HOH HOH . H 8 HOH A 9 709 12 HOH HOH . H 8 HOH A 10 710 46 HOH HOH . H 8 HOH A 11 711 21 HOH HOH . H 8 HOH A 12 712 34 HOH HOH . H 8 HOH A 13 713 27 HOH HOH . H 8 HOH A 14 714 20 HOH HOH . H 8 HOH A 15 715 3 HOH HOH . H 8 HOH A 16 716 45 HOH HOH . H 8 HOH A 17 717 4 HOH HOH . H 8 HOH A 18 718 29 HOH HOH . H 8 HOH A 19 719 13 HOH HOH . H 8 HOH A 20 720 32 HOH HOH . H 8 HOH A 21 721 16 HOH HOH . H 8 HOH A 22 722 17 HOH HOH . H 8 HOH A 23 723 15 HOH HOH . H 8 HOH A 24 724 10 HOH HOH . H 8 HOH A 25 725 25 HOH HOH . H 8 HOH A 26 726 33 HOH HOH . H 8 HOH A 27 727 38 HOH HOH . H 8 HOH A 28 728 28 HOH HOH . H 8 HOH A 29 729 42 HOH HOH . H 8 HOH A 30 730 26 HOH HOH . H 8 HOH A 31 731 19 HOH HOH . H 8 HOH A 32 732 18 HOH HOH . H 8 HOH A 33 733 23 HOH HOH . H 8 HOH A 34 734 43 HOH HOH . H 8 HOH A 35 735 37 HOH HOH . H 8 HOH A 36 736 2 HOH HOH . H 8 HOH A 37 737 7 HOH HOH . H 8 HOH A 38 738 39 HOH HOH . H 8 HOH A 39 739 35 HOH HOH . H 8 HOH A 40 740 48 HOH HOH . H 8 HOH A 41 741 5 HOH HOH . H 8 HOH A 42 742 44 HOH HOH . I 8 HOH B 1 301 53 HOH HOH . I 8 HOH B 2 302 41 HOH HOH . I 8 HOH B 3 303 8 HOH HOH . I 8 HOH B 4 304 30 HOH HOH . I 8 HOH B 5 305 47 HOH HOH . I 8 HOH B 6 306 36 HOH HOH . I 8 HOH B 7 307 50 HOH HOH . I 8 HOH B 8 308 22 HOH HOH . I 8 HOH B 9 309 52 HOH HOH . I 8 HOH B 10 310 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 5 -16.967 -28.22 -12.629 1 102.05 ? S SO4 603 A 1 HETATM 2 O O1 SO4 . . . E 5 -16.738 -28.372 -14.047 1 96.35 ? O1 SO4 603 A 1 HETATM 3 O O2 SO4 . . . E 5 -17.961 -27.197 -12.397 1 101.39 ? O2 SO4 603 A 1 HETATM 4 O O3 SO4 . . . E 5 -17.432 -29.464 -12.079 1 86.77 ? O3 SO4 603 A 1 HETATM 5 O O4 SO4 . . . E 5 -15.734 -27.85 -11.986 1 97.02 ? O4 SO4 603 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #