data_7U2X # _model_server_result.job_id S5fl21tegudNo_WfhTVxCg _model_server_result.datetime_utc '2024-11-27 09:03:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u2x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1601}' # _entry.id 7U2X # _exptl.entry_id 7U2X _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 734.039 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U2X _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U2X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 Q N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 6 E CYS 6 1_555 B SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 C SG CYS 110 B CYS 110 1_555 C SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 110 C CYS 110 1_555 D SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 E SG CYS 110 D CYS 110 1_555 E SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O4 PTY sing 622 n n C1 C6 PTY sing 623 n n C1 HC11 PTY sing 624 n n C1 HC12 PTY sing 625 n n C2 C3 PTY sing 626 n n C2 N1 PTY sing 627 n n C2 HC21 PTY sing 628 n n C2 HC22 PTY sing 629 n n C3 O11 PTY sing 630 n n C3 HC31 PTY sing 631 n n C3 HC32 PTY sing 632 n n O4 C30 PTY sing 633 n n C5 C6 PTY sing 634 n n C5 O14 PTY sing 635 n n C5 HC51 PTY sing 636 n n C5 HC52 PTY sing 637 n n C6 O7 PTY sing 638 n n C6 HC6 PTY sing 639 n n O7 C8 PTY sing 640 n n C8 O10 PTY doub 641 n n C8 C11 PTY sing 642 n n C11 C12 PTY sing 643 n n C11 H111 PTY sing 644 n n C11 H112 PTY sing 645 n n C12 C13 PTY sing 646 n n C12 H121 PTY sing 647 n n C12 H122 PTY sing 648 n n C13 C14 PTY sing 649 n n C13 H131 PTY sing 650 n n C13 H132 PTY sing 651 n n C14 C15 PTY sing 652 n n C14 H141 PTY sing 653 n n C14 H142 PTY sing 654 n n C15 C16 PTY sing 655 n n C15 H151 PTY sing 656 n n C15 H152 PTY sing 657 n n C16 C17 PTY sing 658 n n C16 H161 PTY sing 659 n n C16 H162 PTY sing 660 n n C17 C18 PTY sing 661 n n C17 H171 PTY sing 662 n n C17 H172 PTY sing 663 n n C18 C19 PTY sing 664 n n C18 H181 PTY sing 665 n n C18 H182 PTY sing 666 n n C19 C20 PTY sing 667 n n C19 H191 PTY sing 668 n n C19 H192 PTY sing 669 n n C20 C21 PTY sing 670 n n C20 H201 PTY sing 671 n n C20 H202 PTY sing 672 n n C21 C22 PTY sing 673 n n C21 H211 PTY sing 674 n n C21 H212 PTY sing 675 n n C22 C23 PTY sing 676 n n C22 H221 PTY sing 677 n n C22 H222 PTY sing 678 n n C23 C24 PTY sing 679 n n C23 H231 PTY sing 680 n n C23 H232 PTY sing 681 n n C24 C25 PTY sing 682 n n C24 H241 PTY sing 683 n n C24 H242 PTY sing 684 n n C25 C26 PTY sing 685 n n C25 H251 PTY sing 686 n n C25 H252 PTY sing 687 n n C26 C27 PTY sing 688 n n C26 H261 PTY sing 689 n n C26 H262 PTY sing 690 n n C27 C28 PTY sing 691 n n C27 H271 PTY sing 692 n n C27 H272 PTY sing 693 n n C28 C29 PTY sing 694 n n C28 H281 PTY sing 695 n n C28 H282 PTY sing 696 n n C29 H291 PTY sing 697 n n C29 H292 PTY sing 698 n n C29 H293 PTY sing 699 n n C30 C31 PTY sing 700 n n C30 O30 PTY doub 701 n n C31 C32 PTY sing 702 n n C31 H311 PTY sing 703 n n C31 H312 PTY sing 704 n n C32 C33 PTY sing 705 n n C32 H321 PTY sing 706 n n C32 H322 PTY sing 707 n n C33 C34 PTY sing 708 n n C33 H331 PTY sing 709 n n C33 H332 PTY sing 710 n n C34 C35 PTY sing 711 n n C34 H341 PTY sing 712 n n C34 H342 PTY sing 713 n n C35 C36 PTY sing 714 n n C35 H351 PTY sing 715 n n C35 H352 PTY sing 716 n n C36 C37 PTY sing 717 n n C36 H361 PTY sing 718 n n C36 H362 PTY sing 719 n n C37 C38 PTY sing 720 n n C37 H371 PTY sing 721 n n C37 H372 PTY sing 722 n n C38 C39 PTY sing 723 n n C38 H381 PTY sing 724 n n C38 H382 PTY sing 725 n n C39 C40 PTY sing 726 n n C39 H391 PTY sing 727 n n C39 H392 PTY sing 728 n n C40 C41 PTY sing 729 n n C40 H401 PTY sing 730 n n C40 H402 PTY sing 731 n n C41 C42 PTY sing 732 n n C41 H411 PTY sing 733 n n C41 H412 PTY sing 734 n n C42 C43 PTY sing 735 n n C42 H421 PTY sing 736 n n C42 H422 PTY sing 737 n n C43 C44 PTY sing 738 n n C43 H431 PTY sing 739 n n C43 H432 PTY sing 740 n n C44 H441 PTY sing 741 n n C44 H442 PTY sing 742 n n C44 H443 PTY sing 743 n n P1 O11 PTY sing 744 n n P1 O12 PTY sing 745 n n P1 O13 PTY doub 746 n n P1 O14 PTY sing 747 n n O12 H12O PTY sing 748 n n N1 HN11 PTY sing 749 n n N1 HN12 PTY sing 750 n n # _atom_sites.entry_id 7U2X _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 PTY A 1 401 506 PTY PTY . G 4 POV A 1 402 505 POV POV . H 3 PTY A 1 403 2010 PTY PTY . I 3 PTY A 1 404 506 PTY PTY . J 3 PTY E 1 1601 2003 PTY PTY . K 3 PTY E 1 1602 2004 PTY PTY . L 3 PTY E 1 1603 2008 PTY PTY . M 5 P5S E 1 1604 2006 P5S P5S . N 6 ATP E 1 1605 2002 ATP ATP . O 4 POV E 1 1606 2007 POV POV . P 7 NAG E 1 1607 1 NAG NAG . Q 3 PTY B 1 401 506 PTY PTY . R 4 POV B 1 402 505 POV POV . S 4 POV C 1 401 505 POV POV . T 3 PTY C 1 402 506 PTY PTY . U 4 POV D 1 401 505 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . J 3 176.715 150.703 144.121 1 61.44 ? C1 PTY 1601 E 1 HETATM 2 C C2 PTY . . . J 3 172.951 149.904 138.661 1 61.44 ? C2 PTY 1601 E 1 HETATM 3 C C3 PTY . . . J 3 174.338 150.507 138.659 1 61.44 ? C3 PTY 1601 E 1 HETATM 4 O O4 PTY . . . J 3 177.056 149.71 145.09 1 61.44 ? O4 PTY 1601 E 1 HETATM 5 C C5 PTY . . . J 3 175.473 150.542 141.988 1 61.44 ? C5 PTY 1601 E 1 HETATM 6 C C6 PTY . . . J 3 175.406 150.308 143.479 1 61.44 ? C6 PTY 1601 E 1 HETATM 7 O O7 PTY . . . J 3 174.421 151.119 144.117 1 61.44 ? O7 PTY 1601 E 1 HETATM 8 C C8 PTY . . . J 3 174.021 150.739 145.327 1 61.44 ? C8 PTY 1601 E 1 HETATM 9 O O10 PTY . . . J 3 174.421 149.736 145.863 1 61.44 ? O10 PTY 1601 E 1 HETATM 10 C C11 PTY . . . J 3 173.046 151.708 145.938 1 61.44 ? C11 PTY 1601 E 1 HETATM 11 C C12 PTY . . . J 3 172.834 151.464 147.425 1 61.44 ? C12 PTY 1601 E 1 HETATM 12 C C13 PTY . . . J 3 174.16 151.603 148.172 1 61.44 ? C13 PTY 1601 E 1 HETATM 13 C C14 PTY . . . J 3 174.172 151.082 149.602 1 61.44 ? C14 PTY 1601 E 1 HETATM 14 C C15 PTY . . . J 3 174.277 152.202 150.623 1 61.44 ? C15 PTY 1601 E 1 HETATM 15 C C16 PTY . . . J 3 174.993 151.803 151.903 1 61.44 ? C16 PTY 1601 E 1 HETATM 16 C C17 PTY . . . J 3 175.801 152.96 152.467 1 61.44 ? C17 PTY 1601 E 1 HETATM 17 C C18 PTY . . . J 3 176.84 152.555 153.502 1 61.44 ? C18 PTY 1601 E 1 HETATM 18 C C19 PTY . . . J 3 177.647 153.742 154.005 1 61.44 ? C19 PTY 1601 E 1 HETATM 19 C C20 PTY . . . J 3 179.114 153.418 154.242 1 61.44 ? C20 PTY 1601 E 1 HETATM 20 C C30 PTY . . . J 3 177.433 150.138 146.294 1 61.44 ? C30 PTY 1601 E 1 HETATM 21 C C31 PTY . . . J 3 178.302 149.148 147.013 1 61.44 ? C31 PTY 1601 E 1 HETATM 22 O O30 PTY . . . J 3 177.106 151.205 146.738 1 61.44 ? O30 PTY 1601 E 1 HETATM 23 C C32 PTY . . . J 3 179.136 149.771 148.12 1 61.44 ? C32 PTY 1601 E 1 HETATM 24 C C33 PTY . . . J 3 179.567 148.722 149.137 1 61.44 ? C33 PTY 1601 E 1 HETATM 25 C C34 PTY . . . J 3 178.453 148.404 150.126 1 61.44 ? C34 PTY 1601 E 1 HETATM 26 C C35 PTY . . . J 3 178.92 147.724 151.406 1 61.44 ? C35 PTY 1601 E 1 HETATM 27 P P1 PTY . . . J 3 173.717 152.024 140.797 1 61.44 ? P1 PTY 1601 E 1 HETATM 28 O O11 PTY . . . J 3 174.414 151.757 139.339 1 61.44 ? O11 PTY 1601 E 1 HETATM 29 O O12 PTY . . . J 3 172.229 152.084 140.672 1 61.44 ? O12 PTY 1601 E 1 HETATM 30 O O13 PTY . . . J 3 174.421 153.109 141.542 1 61.44 ? O13 PTY 1601 E 1 HETATM 31 O O14 PTY . . . J 3 174.18 150.589 141.444 1 61.44 ? O14 PTY 1601 E 1 HETATM 32 N N1 PTY . . . J 3 171.915 150.888 138.41 1 61.44 ? N1 PTY 1601 E 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 67 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #