data_7U2X # _model_server_result.job_id mIRdEKwHISojw-WL4UitCg _model_server_result.datetime_utc '2024-11-04 23:29:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u2x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1605}' # _entry.id 7U2X # _exptl.entry_id 7U2X _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U2X _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U2X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 6 E CYS 6 1_555 B SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 C SG CYS 110 B CYS 110 1_555 C SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 110 C CYS 110 1_555 D SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 E SG CYS 110 D CYS 110 1_555 E SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7U2X _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 PTY A 1 401 506 PTY PTY . G 4 POV A 1 402 505 POV POV . H 3 PTY A 1 403 2010 PTY PTY . I 3 PTY A 1 404 506 PTY PTY . J 3 PTY E 1 1601 2003 PTY PTY . K 3 PTY E 1 1602 2004 PTY PTY . L 3 PTY E 1 1603 2008 PTY PTY . M 5 P5S E 1 1604 2006 P5S P5S . N 6 ATP E 1 1605 2002 ATP ATP . O 4 POV E 1 1606 2007 POV POV . P 7 NAG E 1 1607 1 NAG NAG . Q 3 PTY B 1 401 506 PTY PTY . R 4 POV B 1 402 505 POV POV . S 4 POV C 1 401 505 POV POV . T 3 PTY C 1 402 506 PTY PTY . U 4 POV D 1 401 505 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . N 6 213.75 161.227 89.055 1 128.66 ? PG ATP 1605 E 1 HETATM 2 O O1G ATP . . . N 6 215.081 161.323 88.397 1 128.66 ? O1G ATP 1605 E 1 HETATM 3 O O2G ATP . . . N 6 212.698 160.515 88.207 1 128.66 ? O2G ATP 1605 E 1 HETATM 4 O O3G ATP . . . N 6 213.787 160.59 90.443 1 128.66 ? O3G ATP 1605 E 1 HETATM 5 P PB ATP . . . N 6 212.213 163.71 88.581 1 128.66 ? PB ATP 1605 E 1 HETATM 6 O O1B ATP . . . N 6 212.712 164.027 87.233 1 128.66 ? O1B ATP 1605 E 1 HETATM 7 O O2B ATP . . . N 6 210.794 163.167 88.667 1 128.66 ? O2B ATP 1605 E 1 HETATM 8 O O3B ATP . . . N 6 213.148 162.673 89.296 1 128.66 ? O3B ATP 1605 E 1 HETATM 9 P PA ATP . . . N 6 212.223 166.543 89.386 1 128.66 ? PA ATP 1605 E 1 HETATM 10 O O1A ATP . . . N 6 210.826 167.024 89.388 1 128.66 ? O1A ATP 1605 E 1 HETATM 11 O O2A ATP . . . N 6 213 166.877 88.114 1 128.66 ? O2A ATP 1605 E 1 HETATM 12 O O3A ATP . . . N 6 212.295 164.971 89.546 1 128.66 ? O3A ATP 1605 E 1 HETATM 13 O O5' ATP . . . N 6 213.034 167.099 90.622 1 128.66 ? O5' ATP 1605 E 1 HETATM 14 C C5' ATP . . . N 6 213.483 168.47 90.662 1 128.66 ? C5' ATP 1605 E 1 HETATM 15 C C4' ATP . . . N 6 214.084 168.781 92.009 1 128.66 ? C4' ATP 1605 E 1 HETATM 16 O O4' ATP . . . N 6 213.082 169.365 92.866 1 128.66 ? O4' ATP 1605 E 1 HETATM 17 C C3' ATP . . . N 6 214.608 167.584 92.791 1 128.66 ? C3' ATP 1605 E 1 HETATM 18 O O3' ATP . . . N 6 215.931 167.251 92.386 1 128.66 ? O3' ATP 1605 E 1 HETATM 19 C C2' ATP . . . N 6 214.573 168.104 94.229 1 128.66 ? C2' ATP 1605 E 1 HETATM 20 O O2' ATP . . . N 6 215.725 168.877 94.543 1 128.66 ? O2' ATP 1605 E 1 HETATM 21 C C1' ATP . . . N 6 213.323 168.993 94.214 1 128.66 ? C1' ATP 1605 E 1 HETATM 22 N N9 ATP . . . N 6 212.129 168.338 94.732 1 128.66 ? N9 ATP 1605 E 1 HETATM 23 C C8 ATP . . . N 6 211.422 167.319 94.15 1 128.66 ? C8 ATP 1605 E 1 HETATM 24 N N7 ATP . . . N 6 210.385 166.92 94.846 1 128.66 ? N7 ATP 1605 E 1 HETATM 25 C C5 ATP . . . N 6 210.414 167.733 95.97 1 128.66 ? C5 ATP 1605 E 1 HETATM 26 C C6 ATP . . . N 6 209.582 167.819 97.102 1 128.66 ? C6 ATP 1605 E 1 HETATM 27 N N6 ATP . . . N 6 208.513 167.043 97.301 1 128.66 ? N6 ATP 1605 E 1 HETATM 28 N N1 ATP . . . N 6 209.888 168.744 98.037 1 128.66 ? N1 ATP 1605 E 1 HETATM 29 C C2 ATP . . . N 6 210.956 169.522 97.846 1 128.66 ? C2 ATP 1605 E 1 HETATM 30 N N3 ATP . . . N 6 211.808 169.537 96.819 1 128.66 ? N3 ATP 1605 E 1 HETATM 31 C C4 ATP . . . N 6 211.483 168.612 95.911 1 128.66 ? C4 ATP 1605 E 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #