data_7U2X
#
_model_server_result.job_id            fcZeL3VKMlsUMsfT2uf4AA 
_model_server_result.datetime_utc      '2024-11-23 17:18:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u2x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"U","auth_seq_id":401}' 
#
_entry.id    7U2X 
#
_exptl.entry_id    7U2X 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7U2X 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U2X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 O N N 
? 4 R N N 
? 4 S N N 
? 4 U N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 B SG CYS 6 E CYS 6 1_555 B SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf3 C SG CYS 110 B CYS 110 1_555 C SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 D SG CYS 110 C CYS 110 1_555 D SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 E SG CYS 110 D CYS 110 1_555 E SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 POV sing 472 n n 
N C13 POV sing 473 n n 
N C14 POV sing 474 n n 
N C15 POV sing 475 n n 
P O11 POV sing 476 n n 
P O12 POV sing 477 n n 
P O13 POV sing 478 n n 
P O14 POV doub 479 n n 
C1 C2 POV sing 480 n n 
C1 O11 POV sing 481 n n 
C1 H1 POV sing 482 n n 
C1 H1A POV sing 483 n n 
C2 C3 POV sing 484 n n 
C2 O21 POV sing 485 n n 
C2 H2 POV sing 486 n n 
C3 O31 POV sing 487 n n 
C3 H3 POV sing 488 n n 
C3 H3A POV sing 489 n n 
C210 C211 POV sing 490 n n 
C210 C29 POV doub 491 z n 
C210 H210 POV sing 492 n n 
C310 C311 POV sing 493 n n 
C310 C39 POV sing 494 n n 
C310 H310 POV sing 495 n n 
C310 H31A POV sing 496 n n 
C11 C12 POV sing 497 n n 
C11 O12 POV sing 498 n n 
C11 H11 POV sing 499 n n 
C11 H11A POV sing 500 n n 
C211 C212 POV sing 501 n n 
C211 H211 POV sing 502 n n 
C211 H21A POV sing 503 n n 
C311 C312 POV sing 504 n n 
C311 H311 POV sing 505 n n 
C311 H31B POV sing 506 n n 
C12 H12 POV sing 507 n n 
C12 H12A POV sing 508 n n 
C212 C213 POV sing 509 n n 
C212 H212 POV sing 510 n n 
C212 H21B POV sing 511 n n 
C312 C313 POV sing 512 n n 
C312 H312 POV sing 513 n n 
C312 H31C POV sing 514 n n 
C13 H13 POV sing 515 n n 
C13 H13A POV sing 516 n n 
C13 H13B POV sing 517 n n 
C213 C214 POV sing 518 n n 
C213 H213 POV sing 519 n n 
C213 H21C POV sing 520 n n 
C313 C314 POV sing 521 n n 
C313 H313 POV sing 522 n n 
C313 H31D POV sing 523 n n 
C14 H14 POV sing 524 n n 
C14 H14A POV sing 525 n n 
C14 H14B POV sing 526 n n 
C214 C215 POV sing 527 n n 
C214 H214 POV sing 528 n n 
C214 H21D POV sing 529 n n 
C314 C315 POV sing 530 n n 
C314 H314 POV sing 531 n n 
C314 H31E POV sing 532 n n 
C15 H15 POV sing 533 n n 
C15 H15A POV sing 534 n n 
C15 H15B POV sing 535 n n 
C215 C216 POV sing 536 n n 
C215 H215 POV sing 537 n n 
C215 H21E POV sing 538 n n 
C315 C316 POV sing 539 n n 
C315 H315 POV sing 540 n n 
C315 H31F POV sing 541 n n 
C216 C217 POV sing 542 n n 
C216 H216 POV sing 543 n n 
C216 H21F POV sing 544 n n 
C316 H316 POV sing 545 n n 
C316 H31G POV sing 546 n n 
C316 H31H POV sing 547 n n 
C217 C218 POV sing 548 n n 
C217 H217 POV sing 549 n n 
C217 H21G POV sing 550 n n 
C218 H218 POV sing 551 n n 
C218 H21H POV sing 552 n n 
C218 H21J POV sing 553 n n 
C21 O21 POV sing 554 n n 
C21 C22 POV sing 555 n n 
C21 O22 POV doub 556 n n 
C22 C23 POV sing 557 n n 
C22 H22 POV sing 558 n n 
C22 H22A POV sing 559 n n 
C23 C24 POV sing 560 n n 
C23 H23 POV sing 561 n n 
C23 H23A POV sing 562 n n 
C24 C25 POV sing 563 n n 
C24 H24 POV sing 564 n n 
C24 H24A POV sing 565 n n 
C25 C26 POV sing 566 n n 
C25 H25 POV sing 567 n n 
C25 H25A POV sing 568 n n 
C26 C27 POV sing 569 n n 
C26 H26 POV sing 570 n n 
C26 H26A POV sing 571 n n 
C27 C28 POV sing 572 n n 
C27 H27 POV sing 573 n n 
C27 H27A POV sing 574 n n 
C28 C29 POV sing 575 n n 
C28 H28 POV sing 576 n n 
C28 H28A POV sing 577 n n 
C29 H29 POV sing 578 n n 
C31 O31 POV sing 579 n n 
C31 C32 POV sing 580 n n 
C31 O32 POV doub 581 n n 
C32 C33 POV sing 582 n n 
C32 H32 POV sing 583 n n 
C32 H32A POV sing 584 n n 
C33 C34 POV sing 585 n n 
C33 H33 POV sing 586 n n 
C33 H33A POV sing 587 n n 
C34 C35 POV sing 588 n n 
C34 H34 POV sing 589 n n 
C34 H34A POV sing 590 n n 
C35 C36 POV sing 591 n n 
C35 H35 POV sing 592 n n 
C35 H35A POV sing 593 n n 
C36 C37 POV sing 594 n n 
C36 H36 POV sing 595 n n 
C36 H36A POV sing 596 n n 
C37 C38 POV sing 597 n n 
C37 H37 POV sing 598 n n 
C37 H37A POV sing 599 n n 
C38 C39 POV sing 600 n n 
C38 H38 POV sing 601 n n 
C38 H38A POV sing 602 n n 
C39 H39 POV sing 603 n n 
C39 H39A POV sing 604 n n 
#
_atom_sites.entry_id                     7U2X 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 3 PTY A 1 401 506 PTY PTY . 
G 4 POV A 1 402 505 POV POV . 
H 3 PTY A 1 403 2010 PTY PTY . 
I 3 PTY A 1 404 506 PTY PTY . 
J 3 PTY E 1 1601 2003 PTY PTY . 
K 3 PTY E 1 1602 2004 PTY PTY . 
L 3 PTY E 1 1603 2008 PTY PTY . 
M 5 P5S E 1 1604 2006 P5S P5S . 
N 6 ATP E 1 1605 2002 ATP ATP . 
O 4 POV E 1 1606 2007 POV POV . 
P 7 NAG E 1 1607 1 NAG NAG . 
Q 3 PTY B 1 401 506 PTY PTY . 
R 4 POV B 1 402 505 POV POV . 
S 4 POV C 1 401 505 POV POV . 
T 3 PTY C 1 402 506 PTY PTY . 
U 4 POV D 1 401 505 POV POV . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N POV . . . U 4 147.836 118.237 185.7 1 68.11 ? N POV 401 D 1 
HETATM 2 P P POV . . . U 4 149.157 117.58 181.036 1 68.11 ? P POV 401 D 1 
HETATM 3 C C1 POV . . . U 4 147.401 116.08 179.807 1 68.11 ? C1 POV 401 D 1 
HETATM 4 C C2 POV . . . U 4 147.36 114.936 178.791 1 68.11 ? C2 POV 401 D 1 
HETATM 5 C C3 POV . . . U 4 148.709 114.571 178.232 1 68.11 ? C3 POV 401 D 1 
HETATM 6 C C210 POV . . . U 4 143.64 114.231 167.396 1 68.11 ? C210 POV 401 D 1 
HETATM 7 C C11 POV . . . U 4 149.306 118.001 183.6 1 68.11 ? C11 POV 401 D 1 
HETATM 8 O O11 POV . . . U 4 148.703 116.192 180.332 1 68.11 ? O11 POV 401 D 1 
HETATM 9 C C12 POV . . . U 4 148.958 117.533 184.992 1 68.11 ? C12 POV 401 D 1 
HETATM 10 O O12 POV . . . U 4 148.746 117.202 182.59 1 68.11 ? O12 POV 401 D 1 
HETATM 11 C C13 POV . . . U 4 146.738 118.565 184.757 1 68.11 ? C13 POV 401 D 1 
HETATM 12 O O13 POV . . . U 4 150.647 117.673 180.954 1 68.11 ? O13 POV 401 D 1 
HETATM 13 C C14 POV . . . U 4 147.309 117.306 186.73 1 68.11 ? C14 POV 401 D 1 
HETATM 14 O O14 POV . . . U 4 148.288 118.693 180.564 1 68.11 ? O14 POV 401 D 1 
HETATM 15 C C15 POV . . . U 4 148.295 119.473 186.388 1 68.11 ? C15 POV 401 D 1 
HETATM 16 C C21 POV . . . U 4 145.858 114.31 177.096 1 68.11 ? C21 POV 401 D 1 
HETATM 17 O O21 POV . . . U 4 146.584 115.269 177.648 1 68.11 ? O21 POV 401 D 1 
HETATM 18 C C22 POV . . . U 4 145.623 114.557 175.634 1 68.11 ? C22 POV 401 D 1 
HETATM 19 O O22 POV . . . U 4 145.449 113.365 177.712 1 68.11 ? O22 POV 401 D 1 
HETATM 20 C C23 POV . . . U 4 144.878 113.423 174.951 1 68.11 ? C23 POV 401 D 1 
HETATM 21 C C24 POV . . . U 4 145.483 113.075 173.598 1 68.11 ? C24 POV 401 D 1 
HETATM 22 C C25 POV . . . U 4 145.3 114.172 172.559 1 68.11 ? C25 POV 401 D 1 
HETATM 23 C C26 POV . . . U 4 143.843 114.573 172.382 1 68.11 ? C26 POV 401 D 1 
HETATM 24 C C27 POV . . . U 4 143.531 115.074 170.98 1 68.11 ? C27 POV 401 D 1 
HETATM 25 C C28 POV . . . U 4 143.603 113.967 169.928 1 68.11 ? C28 POV 401 D 1 
HETATM 26 C C29 POV . . . U 4 143.087 114.416 168.595 1 68.11 ? C29 POV 401 D 1 
HETATM 27 C C31 POV . . . U 4 149.1 114.549 175.904 1 68.11 ? C31 POV 401 D 1 
HETATM 28 O O31 POV . . . U 4 148.855 115.257 176.996 1 68.11 ? O31 POV 401 D 1 
HETATM 29 C C32 POV . . . U 4 150.107 115.236 175.03 1 68.11 ? C32 POV 401 D 1 
HETATM 30 O O32 POV . . . U 4 148.572 113.495 175.67 1 68.11 ? O32 POV 401 D 1 
HETATM 31 C C33 POV . . . U 4 150.34 114.57 173.689 1 68.11 ? C33 POV 401 D 1 
HETATM 32 C C34 POV . . . U 4 149.152 114.792 172.764 1 68.11 ? C34 POV 401 D 1 
HETATM 33 C C35 POV . . . U 4 149.216 113.993 171.472 1 68.11 ? C35 POV 401 D 1 
HETATM 34 C C36 POV . . . U 4 148.77 114.783 170.249 1 68.11 ? C36 POV 401 D 1 
HETATM 35 C C37 POV . . . U 4 148.769 113.944 168.982 1 68.11 ? C37 POV 401 D 1 
HETATM 36 C C38 POV . . . U 4 148.771 114.78 167.712 1 68.11 ? C38 POV 401 D 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           36 
#