data_7U2X # _model_server_result.job_id wSxvrFJOFUwKl15w6wdjOw _model_server_result.datetime_utc '2024-11-04 23:32:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u2x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":402}' # _entry.id 7U2X # _exptl.entry_id 7U2X _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 760.076 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U2X _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U2X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 O N N ? 4 R N N ? 4 S N N ? 4 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 6 E CYS 6 1_555 B SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 C SG CYS 110 B CYS 110 1_555 C SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 110 C CYS 110 1_555 D SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 E SG CYS 110 D CYS 110 1_555 E SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C42 H82 N O8 P' _chem_comp.formula_weight 760.076 _chem_comp.id POV _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms POPC # _atom_sites.entry_id 7U2X _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 PTY A 1 401 506 PTY PTY . G 4 POV A 1 402 505 POV POV . H 3 PTY A 1 403 2010 PTY PTY . I 3 PTY A 1 404 506 PTY PTY . J 3 PTY E 1 1601 2003 PTY PTY . K 3 PTY E 1 1602 2004 PTY PTY . L 3 PTY E 1 1603 2008 PTY PTY . M 5 P5S E 1 1604 2006 P5S P5S . N 6 ATP E 1 1605 2002 ATP ATP . O 4 POV E 1 1606 2007 POV POV . P 7 NAG E 1 1607 1 NAG NAG . Q 3 PTY B 1 401 506 PTY PTY . R 4 POV B 1 402 505 POV POV . S 4 POV C 1 401 505 POV POV . T 3 PTY C 1 402 506 PTY PTY . U 4 POV D 1 401 505 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N POV . . . G 4 160.294 149.474 182.965 1 56.9 ? N POV 402 A 1 HETATM 2 P P POV . . . G 4 160.417 149.293 178.761 1 56.9 ? P POV 402 A 1 HETATM 3 C C1 POV . . . G 4 162.251 148.262 177.214 1 56.9 ? C1 POV 402 A 1 HETATM 4 C C2 POV . . . G 4 162.808 148.354 175.79 1 56.9 ? C2 POV 402 A 1 HETATM 5 C C3 POV . . . G 4 162.444 149.616 175.053 1 56.9 ? C3 POV 402 A 1 HETATM 6 C C210 POV . . . G 4 160.7 142.67 165.866 1 56.9 ? C210 POV 402 A 1 HETATM 7 C C11 POV . . . G 4 160.279 150.908 180.802 1 56.9 ? C11 POV 402 A 1 HETATM 8 O O11 POV . . . G 4 161.42 149.364 177.49 1 56.9 ? O11 POV 402 A 1 HETATM 9 C C12 POV . . . G 4 161.046 150.248 181.921 1 56.9 ? C12 POV 402 A 1 HETATM 10 O O12 POV . . . G 4 160.85 150.682 179.538 1 56.9 ? O12 POV 402 A 1 HETATM 11 C C13 POV . . . G 4 161.153 148.455 183.614 1 56.9 ? C13 POV 402 A 1 HETATM 12 O O13 POV . . . G 4 159.045 149.492 178.214 1 56.9 ? O13 POV 402 A 1 HETATM 13 C C14 POV . . . G 4 159.862 150.455 183.993 1 56.9 ? C14 POV 402 A 1 HETATM 14 O O14 POV . . . G 4 160.738 148.133 179.638 1 56.9 ? O14 POV 402 A 1 HETATM 15 C C15 POV . . . G 4 159.085 148.808 182.417 1 56.9 ? C15 POV 402 A 1 HETATM 16 C C21 POV . . . G 4 163.178 146.424 174.426 1 56.9 ? C21 POV 402 A 1 HETATM 17 O O21 POV . . . G 4 162.332 147.296 174.963 1 56.9 ? O21 POV 402 A 1 HETATM 18 C C22 POV . . . G 4 162.813 146.151 172.995 1 56.9 ? C22 POV 402 A 1 HETATM 19 O O22 POV . . . G 4 164.095 145.924 175.022 1 56.9 ? O22 POV 402 A 1 HETATM 20 C C23 POV . . . G 4 163.9 145.464 172.186 1 56.9 ? C23 POV 402 A 1 HETATM 21 C C24 POV . . . G 4 163.399 145.082 170.8 1 56.9 ? C24 POV 402 A 1 HETATM 22 C C25 POV . . . G 4 163.252 146.268 169.859 1 56.9 ? C25 POV 402 A 1 HETATM 23 C C26 POV . . . G 4 162.473 145.925 168.598 1 56.9 ? C26 POV 402 A 1 HETATM 24 C C27 POV . . . G 4 162.915 144.621 167.946 1 56.9 ? C27 POV 402 A 1 HETATM 25 C C28 POV . . . G 4 162.391 144.458 166.518 1 56.9 ? C28 POV 402 A 1 HETATM 26 C C29 POV . . . G 4 161.918 143.066 166.234 1 56.9 ? C29 POV 402 A 1 HETATM 27 C C31 POV . . . G 4 162.409 150.22 172.756 1 56.9 ? C31 POV 402 A 1 HETATM 28 O O31 POV . . . G 4 162.798 149.38 173.701 1 56.9 ? O31 POV 402 A 1 HETATM 29 C C32 POV . . . G 4 162.522 149.559 171.417 1 56.9 ? C32 POV 402 A 1 HETATM 30 O O32 POV . . . G 4 162.023 151.341 172.961 1 56.9 ? O32 POV 402 A 1 HETATM 31 C C33 POV . . . G 4 162.408 150.48 170.219 1 56.9 ? C33 POV 402 A 1 HETATM 32 C C34 POV . . . G 4 162.449 149.66 168.939 1 56.9 ? C34 POV 402 A 1 HETATM 33 C C35 POV . . . G 4 161.762 150.318 167.755 1 56.9 ? C35 POV 402 A 1 HETATM 34 C C36 POV . . . G 4 161.949 149.524 166.469 1 56.9 ? C36 POV 402 A 1 HETATM 35 C C37 POV . . . G 4 163.231 148.708 166.393 1 56.9 ? C37 POV 402 A 1 HETATM 36 C C38 POV . . . G 4 163.351 147.944 165.079 1 56.9 ? C38 POV 402 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #