data_7U2X # _model_server_result.job_id PW3HX62Kgw2wyDlrTLt1Yw _model_server_result.datetime_utc '2024-11-04 23:27:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u2x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":404}' # _entry.id 7U2X # _exptl.entry_id 7U2X _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 734.039 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U2X _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U2X _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 Q N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 6 E CYS 6 1_555 B SG CYS 26 E CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 C SG CYS 110 B CYS 110 1_555 C SG CYS 142 B CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 D SG CYS 110 C CYS 110 1_555 D SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 E SG CYS 110 D CYS 110 1_555 E SG CYS 142 D CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7U2X _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 PTY A 1 401 506 PTY PTY . G 4 POV A 1 402 505 POV POV . H 3 PTY A 1 403 2010 PTY PTY . I 3 PTY A 1 404 506 PTY PTY . J 3 PTY E 1 1601 2003 PTY PTY . K 3 PTY E 1 1602 2004 PTY PTY . L 3 PTY E 1 1603 2008 PTY PTY . M 5 P5S E 1 1604 2006 P5S P5S . N 6 ATP E 1 1605 2002 ATP ATP . O 4 POV E 1 1606 2007 POV POV . P 7 NAG E 1 1607 1 NAG NAG . Q 3 PTY B 1 401 506 PTY PTY . R 4 POV B 1 402 505 POV POV . S 4 POV C 1 401 505 POV POV . T 3 PTY C 1 402 506 PTY PTY . U 4 POV D 1 401 505 POV POV . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . I 3 161.096 142.195 174.285 1 80.49 ? C1 PTY 404 A 1 HETATM 2 C C2 PTY . . . I 3 163.691 139.067 181.415 1 80.49 ? C2 PTY 404 A 1 HETATM 3 C C3 PTY . . . I 3 164.16 138.709 180.023 1 80.49 ? C3 PTY 404 A 1 HETATM 4 O O4 PTY . . . I 3 160.741 141.418 173.142 1 80.49 ? O4 PTY 404 A 1 HETATM 5 C C5 PTY . . . I 3 161.988 141.669 176.585 1 80.49 ? C5 PTY 404 A 1 HETATM 6 C C6 PTY . . . I 3 162.075 141.376 175.098 1 80.49 ? C6 PTY 404 A 1 HETATM 7 O O7 PTY . . . I 3 163.378 141.673 174.583 1 80.49 ? O7 PTY 404 A 1 HETATM 8 C C8 PTY . . . I 3 164.281 140.698 174.526 1 80.49 ? C8 PTY 404 A 1 HETATM 9 O O10 PTY . . . I 3 164.208 139.695 175.186 1 80.49 ? O10 PTY 404 A 1 HETATM 10 C C11 PTY . . . I 3 165.373 141.015 173.544 1 80.49 ? C11 PTY 404 A 1 HETATM 11 C C12 PTY . . . I 3 165.869 139.794 172.792 1 80.49 ? C12 PTY 404 A 1 HETATM 12 C C13 PTY . . . I 3 166.806 138.947 173.642 1 80.49 ? C13 PTY 404 A 1 HETATM 13 C C14 PTY . . . I 3 166.534 137.455 173.502 1 80.49 ? C14 PTY 404 A 1 HETATM 14 C C15 PTY . . . I 3 165.787 136.845 174.679 1 80.49 ? C15 PTY 404 A 1 HETATM 15 C C16 PTY . . . I 3 166.467 137.107 176.017 1 80.49 ? C16 PTY 404 A 1 HETATM 16 C C17 PTY . . . I 3 165.88 136.313 177.176 1 80.49 ? C17 PTY 404 A 1 HETATM 17 C C18 PTY . . . I 3 165.87 134.815 176.898 1 80.49 ? C18 PTY 404 A 1 HETATM 18 C C19 PTY . . . I 3 165.269 133.971 178.013 1 80.49 ? C19 PTY 404 A 1 HETATM 19 C C20 PTY . . . I 3 165.06 132.521 177.596 1 80.49 ? C20 PTY 404 A 1 HETATM 20 C C30 PTY . . . I 3 160.588 142.041 171.977 1 80.49 ? C30 PTY 404 A 1 HETATM 21 C C31 PTY . . . I 3 159.969 141.143 170.945 1 80.49 ? C31 PTY 404 A 1 HETATM 22 O O30 PTY . . . I 3 160.906 143.186 171.795 1 80.49 ? O30 PTY 404 A 1 HETATM 23 C C32 PTY . . . I 3 160.94 140.63 169.895 1 80.49 ? C32 PTY 404 A 1 HETATM 24 C C33 PTY . . . I 3 160.74 139.147 169.604 1 80.49 ? C33 PTY 404 A 1 HETATM 25 C C34 PTY . . . I 3 161.059 138.773 168.162 1 80.49 ? C34 PTY 404 A 1 HETATM 26 C C35 PTY . . . I 3 160.145 139.439 167.143 1 80.49 ? C35 PTY 404 A 1 HETATM 27 P P1 PTY . . . I 3 163.032 140.731 178.801 1 80.49 ? P1 PTY 404 A 1 HETATM 28 O O11 PTY . . . I 3 163.185 139.129 179.081 1 80.49 ? O11 PTY 404 A 1 HETATM 29 O O12 PTY . . . I 3 162.023 141.323 179.732 1 80.49 ? O12 PTY 404 A 1 HETATM 30 O O13 PTY . . . I 3 164.381 141.364 178.677 1 80.49 ? O13 PTY 404 A 1 HETATM 31 O O14 PTY . . . I 3 162.372 140.52 177.308 1 80.49 ? O14 PTY 404 A 1 HETATM 32 N N1 PTY . . . I 3 162.552 138.261 181.82 1 80.49 ? N1 PTY 404 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #