data_7U4H
#
_model_server_result.job_id            QxhctWR816-SFI7-qGIjLw 
_model_server_result.datetime_utc      '2025-03-13 19:08:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7u4h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":1005}' 
#
_entry.id    7U4H 
#
_exptl.entry_id    7U4H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7U4H 
_cell.length_a            175.79 
_cell.length_b            175.79 
_cell.length_c            339.7 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7U4H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    'R 3 2"' 
_symmetry.space_group_name_H-M     'H 3 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,M 1 1 
B,H,I,J,K,L,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 G N N 
? 3 I N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLU 598 A GLU 650 1_555 C MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? 
metalc ? metalc2 A OD1 ASP 601 A ASP 653 1_555 C MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
metalc ? metalc3 A OD2 ASP 601 A ASP 653 1_555 C MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.939 ? 
metalc ? metalc4 A O TYR 603 A TYR 655 1_555 C MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc5 A OE1 GLU 608 A GLU 660 1_555 C MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.72 ? 
metalc ? metalc6 A OE2 GLU 608 A GLU 660 1_555 C MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc7 B O GLU 598 B GLU 650 1_555 H MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc8 B OD1 ASP 601 B ASP 653 1_555 H MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc9 B O TYR 603 B TYR 655 1_555 H MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? 
metalc ? metalc10 B OE1 GLU 608 B GLU 660 1_555 H MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
metalc ? metalc11 B OE2 GLU 608 B GLU 660 1_555 H MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc12 H MG MG . B MG 1001 1_555 N O HOH . B HOH 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? 
metalc ? metalc13 H MG MG . B MG 1001 1_555 N O HOH . B HOH 1113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 70 n n 
C1 C2 EDO sing 71 n n 
C1 H11 EDO sing 72 n n 
C1 H12 EDO sing 73 n n 
O1 HO1 EDO sing 74 n n 
C2 O2 EDO sing 75 n n 
C2 H21 EDO sing 76 n n 
C2 H22 EDO sing 77 n n 
O2 HO2 EDO sing 78 n n 
#
_atom_sites.entry_id                     7U4H 
_atom_sites.fract_transf_matrix[1][1]    0.005689 
_atom_sites.fract_transf_matrix[1][2]    0.003284 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006569 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002944 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 1001 900 MG MG . 
D 3 EDO A 1 1002 901 EDO EDO . 
E 4 EPE A 1 1003 902 EPE EPE . 
F 5 CL A 1 1004 904 CL CL . 
G 3 EDO A 1 1005 905 EDO EDO . 
H 2 MG B 1 1001 900 MG MG . 
I 3 EDO B 1 1002 901 EDO EDO . 
J 4 EPE B 1 1003 902 EPE EPE . 
K 5 CL B 1 1004 904 CL CL . 
L 3 EDO B 1 1005 905 EDO EDO . 
M 6 HOH A 1 1101 131 HOH HOH . 
M 6 HOH A 2 1102 27 HOH HOH . 
M 6 HOH A 3 1103 14 HOH HOH . 
M 6 HOH A 4 1104 147 HOH HOH . 
M 6 HOH A 5 1105 3 HOH HOH . 
M 6 HOH A 6 1106 92 HOH HOH . 
M 6 HOH A 7 1107 128 HOH HOH . 
M 6 HOH A 8 1108 134 HOH HOH . 
M 6 HOH A 9 1109 149 HOH HOH . 
M 6 HOH A 10 1110 174 HOH HOH . 
M 6 HOH A 11 1111 8 HOH HOH . 
M 6 HOH A 12 1112 175 HOH HOH . 
M 6 HOH A 13 1113 179 HOH HOH . 
M 6 HOH A 14 1114 140 HOH HOH . 
M 6 HOH A 15 1115 70 HOH HOH . 
M 6 HOH A 16 1116 86 HOH HOH . 
M 6 HOH A 17 1117 24 HOH HOH . 
M 6 HOH A 18 1118 72 HOH HOH . 
M 6 HOH A 19 1119 69 HOH HOH . 
M 6 HOH A 20 1120 9 HOH HOH . 
M 6 HOH A 21 1121 93 HOH HOH . 
M 6 HOH A 22 1122 17 HOH HOH . 
M 6 HOH A 23 1123 5 HOH HOH . 
M 6 HOH A 24 1124 138 HOH HOH . 
M 6 HOH A 25 1125 1 HOH HOH . 
M 6 HOH A 26 1126 135 HOH HOH . 
M 6 HOH A 27 1127 2 HOH HOH . 
M 6 HOH A 28 1128 145 HOH HOH . 
M 6 HOH A 29 1129 133 HOH HOH . 
M 6 HOH A 30 1130 33 HOH HOH . 
M 6 HOH A 31 1131 99 HOH HOH . 
M 6 HOH A 32 1132 76 HOH HOH . 
M 6 HOH A 33 1133 98 HOH HOH . 
M 6 HOH A 34 1134 39 HOH HOH . 
M 6 HOH A 35 1135 143 HOH HOH . 
M 6 HOH A 36 1136 75 HOH HOH . 
M 6 HOH A 37 1137 178 HOH HOH . 
M 6 HOH A 38 1138 141 HOH HOH . 
M 6 HOH A 39 1139 10 HOH HOH . 
M 6 HOH A 40 1140 176 HOH HOH . 
M 6 HOH A 41 1141 79 HOH HOH . 
M 6 HOH A 42 1142 148 HOH HOH . 
M 6 HOH A 43 1143 136 HOH HOH . 
M 6 HOH A 44 1144 91 HOH HOH . 
M 6 HOH A 45 1145 181 HOH HOH . 
M 6 HOH A 46 1146 83 HOH HOH . 
M 6 HOH A 47 1147 87 HOH HOH . 
M 6 HOH A 48 1148 68 HOH HOH . 
M 6 HOH A 49 1149 7 HOH HOH . 
M 6 HOH A 50 1150 18 HOH HOH . 
M 6 HOH A 51 1151 26 HOH HOH . 
M 6 HOH A 52 1152 32 HOH HOH . 
M 6 HOH A 53 1153 29 HOH HOH . 
M 6 HOH A 54 1154 21 HOH HOH . 
M 6 HOH A 55 1155 41 HOH HOH . 
M 6 HOH A 56 1156 146 HOH HOH . 
M 6 HOH A 57 1157 23 HOH HOH . 
M 6 HOH A 58 1158 22 HOH HOH . 
M 6 HOH A 59 1159 67 HOH HOH . 
M 6 HOH A 60 1160 35 HOH HOH . 
M 6 HOH A 61 1161 38 HOH HOH . 
M 6 HOH A 62 1162 16 HOH HOH . 
M 6 HOH A 63 1163 142 HOH HOH . 
M 6 HOH A 64 1164 6 HOH HOH . 
M 6 HOH A 65 1165 66 HOH HOH . 
M 6 HOH A 66 1166 42 HOH HOH . 
M 6 HOH A 67 1167 144 HOH HOH . 
M 6 HOH A 68 1168 37 HOH HOH . 
M 6 HOH A 69 1169 139 HOH HOH . 
M 6 HOH A 70 1170 19 HOH HOH . 
M 6 HOH A 71 1171 77 HOH HOH . 
M 6 HOH A 72 1172 15 HOH HOH . 
M 6 HOH A 73 1173 88 HOH HOH . 
M 6 HOH A 74 1174 84 HOH HOH . 
M 6 HOH A 75 1175 13 HOH HOH . 
M 6 HOH A 76 1176 89 HOH HOH . 
M 6 HOH A 77 1177 31 HOH HOH . 
M 6 HOH A 78 1178 78 HOH HOH . 
M 6 HOH A 79 1179 80 HOH HOH . 
M 6 HOH A 80 1180 177 HOH HOH . 
M 6 HOH A 81 1181 180 HOH HOH . 
M 6 HOH A 82 1182 11 HOH HOH . 
N 6 HOH B 1 1101 173 HOH HOH . 
N 6 HOH B 2 1102 107 HOH HOH . 
N 6 HOH B 3 1103 44 HOH HOH . 
N 6 HOH B 4 1104 43 HOH HOH . 
N 6 HOH B 5 1105 126 HOH HOH . 
N 6 HOH B 6 1106 108 HOH HOH . 
N 6 HOH B 7 1107 110 HOH HOH . 
N 6 HOH B 8 1108 157 HOH HOH . 
N 6 HOH B 9 1109 117 HOH HOH . 
N 6 HOH B 10 1110 127 HOH HOH . 
N 6 HOH B 11 1111 54 HOH HOH . 
N 6 HOH B 12 1112 101 HOH HOH . 
N 6 HOH B 13 1113 172 HOH HOH . 
N 6 HOH B 14 1114 165 HOH HOH . 
N 6 HOH B 15 1115 50 HOH HOH . 
N 6 HOH B 16 1116 151 HOH HOH . 
N 6 HOH B 17 1117 47 HOH HOH . 
N 6 HOH B 18 1118 58 HOH HOH . 
N 6 HOH B 19 1119 124 HOH HOH . 
N 6 HOH B 20 1120 57 HOH HOH . 
N 6 HOH B 21 1121 103 HOH HOH . 
N 6 HOH B 22 1122 61 HOH HOH . 
N 6 HOH B 23 1123 167 HOH HOH . 
N 6 HOH B 24 1124 60 HOH HOH . 
N 6 HOH B 25 1125 150 HOH HOH . 
N 6 HOH B 26 1126 65 HOH HOH . 
N 6 HOH B 27 1127 160 HOH HOH . 
N 6 HOH B 28 1128 45 HOH HOH . 
N 6 HOH B 29 1129 159 HOH HOH . 
N 6 HOH B 30 1130 53 HOH HOH . 
N 6 HOH B 31 1131 100 HOH HOH . 
N 6 HOH B 32 1132 106 HOH HOH . 
N 6 HOH B 33 1133 156 HOH HOH . 
N 6 HOH B 34 1134 155 HOH HOH . 
N 6 HOH B 35 1135 170 HOH HOH . 
N 6 HOH B 36 1136 104 HOH HOH . 
N 6 HOH B 37 1137 122 HOH HOH . 
N 6 HOH B 38 1138 109 HOH HOH . 
N 6 HOH B 39 1139 55 HOH HOH . 
N 6 HOH B 40 1140 102 HOH HOH . 
N 6 HOH B 41 1141 162 HOH HOH . 
N 6 HOH B 42 1142 48 HOH HOH . 
N 6 HOH B 43 1143 112 HOH HOH . 
N 6 HOH B 44 1144 63 HOH HOH . 
N 6 HOH B 45 1145 169 HOH HOH . 
N 6 HOH B 46 1146 105 HOH HOH . 
N 6 HOH B 47 1147 46 HOH HOH . 
N 6 HOH B 48 1148 52 HOH HOH . 
N 6 HOH B 49 1149 168 HOH HOH . 
N 6 HOH B 50 1150 153 HOH HOH . 
N 6 HOH B 51 1151 115 HOH HOH . 
N 6 HOH B 52 1152 154 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . L 3 55.194 40.87 4.545 1 67.97 ? C1 EDO 1005 B 1 
HETATM 2 O O1 EDO . . . L 3 54.829 40.897 3.152 1 62.1 ? O1 EDO 1005 B 1 
HETATM 3 C C2 EDO . . . L 3 54.977 39.481 5.151 1 61.3 ? C2 EDO 1005 B 1 
HETATM 4 O O2 EDO . . . L 3 53.666 38.987 4.833 1 60.18 ? O2 EDO 1005 B 1 
#
_model_server_stats.io_time_ms              31 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#