data_7U4M # _model_server_result.job_id t1Z8RWHZtBZ1NBsWIt4oSw _model_server_result.datetime_utc '2024-11-30 03:54:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u4m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7U4M # _exptl.entry_id 7U4M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7U4M _cell.length_a 67.828 _cell.length_b 115.654 _cell.length_c 61.219 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U4M _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 32 A CYS 10 1_555 B C6 LBI . A LBI 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? covale ? covale2 A SG CYS 88 A CYS 66 1_555 C C6 LBI . A LBI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7U4M _atom_sites.fract_transf_matrix[1][1] 0.014743 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008646 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016335 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LBI A 1 201 201 LBI L18 . C 2 LBI A 1 202 202 LBI L18 . D 3 EDO A 1 203 203 EDO EDO . E 4 HOH A 1 301 67 HOH HOH . E 4 HOH A 2 302 40 HOH HOH . E 4 HOH A 3 303 31 HOH HOH . E 4 HOH A 4 304 33 HOH HOH . E 4 HOH A 5 305 133 HOH HOH . E 4 HOH A 6 306 125 HOH HOH . E 4 HOH A 7 307 41 HOH HOH . E 4 HOH A 8 308 66 HOH HOH . E 4 HOH A 9 309 12 HOH HOH . E 4 HOH A 10 310 93 HOH HOH . E 4 HOH A 11 311 131 HOH HOH . E 4 HOH A 12 312 100 HOH HOH . E 4 HOH A 13 313 36 HOH HOH . E 4 HOH A 14 314 71 HOH HOH . E 4 HOH A 15 315 107 HOH HOH . E 4 HOH A 16 316 72 HOH HOH . E 4 HOH A 17 317 47 HOH HOH . E 4 HOH A 18 318 37 HOH HOH . E 4 HOH A 19 319 18 HOH HOH . E 4 HOH A 20 320 75 HOH HOH . E 4 HOH A 21 321 11 HOH HOH . E 4 HOH A 22 322 30 HOH HOH . E 4 HOH A 23 323 54 HOH HOH . E 4 HOH A 24 324 25 HOH HOH . E 4 HOH A 25 325 32 HOH HOH . E 4 HOH A 26 326 122 HOH HOH . E 4 HOH A 27 327 46 HOH HOH . E 4 HOH A 28 328 94 HOH HOH . E 4 HOH A 29 329 19 HOH HOH . E 4 HOH A 30 330 8 HOH HOH . E 4 HOH A 31 331 23 HOH HOH . E 4 HOH A 32 332 7 HOH HOH . E 4 HOH A 33 333 53 HOH HOH . E 4 HOH A 34 334 27 HOH HOH . E 4 HOH A 35 335 39 HOH HOH . E 4 HOH A 36 336 10 HOH HOH . E 4 HOH A 37 337 34 HOH HOH . E 4 HOH A 38 338 119 HOH HOH . E 4 HOH A 39 339 49 HOH HOH . E 4 HOH A 40 340 13 HOH HOH . E 4 HOH A 41 341 21 HOH HOH . E 4 HOH A 42 342 85 HOH HOH . E 4 HOH A 43 343 76 HOH HOH . E 4 HOH A 44 344 91 HOH HOH . E 4 HOH A 45 345 95 HOH HOH . E 4 HOH A 46 346 26 HOH HOH . E 4 HOH A 47 347 60 HOH HOH . E 4 HOH A 48 348 6 HOH HOH . E 4 HOH A 49 349 28 HOH HOH . E 4 HOH A 50 350 51 HOH HOH . E 4 HOH A 51 351 129 HOH HOH . E 4 HOH A 52 352 68 HOH HOH . E 4 HOH A 53 353 106 HOH HOH . E 4 HOH A 54 354 98 HOH HOH . E 4 HOH A 55 355 128 HOH HOH . E 4 HOH A 56 356 90 HOH HOH . E 4 HOH A 57 357 44 HOH HOH . E 4 HOH A 58 358 79 HOH HOH . E 4 HOH A 59 359 24 HOH HOH . E 4 HOH A 60 360 89 HOH HOH . E 4 HOH A 61 361 45 HOH HOH . E 4 HOH A 62 362 38 HOH HOH . E 4 HOH A 63 363 20 HOH HOH . E 4 HOH A 64 364 16 HOH HOH . E 4 HOH A 65 365 63 HOH HOH . E 4 HOH A 66 366 81 HOH HOH . E 4 HOH A 67 367 88 HOH HOH . E 4 HOH A 68 368 9 HOH HOH . E 4 HOH A 69 369 59 HOH HOH . E 4 HOH A 70 370 87 HOH HOH . E 4 HOH A 71 371 29 HOH HOH . E 4 HOH A 72 372 14 HOH HOH . E 4 HOH A 73 373 99 HOH HOH . E 4 HOH A 74 374 58 HOH HOH . E 4 HOH A 75 375 2 HOH HOH . E 4 HOH A 76 376 56 HOH HOH . E 4 HOH A 77 377 22 HOH HOH . E 4 HOH A 78 378 64 HOH HOH . E 4 HOH A 79 379 5 HOH HOH . E 4 HOH A 80 380 52 HOH HOH . E 4 HOH A 81 381 48 HOH HOH . E 4 HOH A 82 382 135 HOH HOH . E 4 HOH A 83 383 73 HOH HOH . E 4 HOH A 84 384 86 HOH HOH . E 4 HOH A 85 385 103 HOH HOH . E 4 HOH A 86 386 15 HOH HOH . E 4 HOH A 87 387 17 HOH HOH . E 4 HOH A 88 388 3 HOH HOH . E 4 HOH A 89 389 69 HOH HOH . E 4 HOH A 90 390 4 HOH HOH . E 4 HOH A 91 391 116 HOH HOH . E 4 HOH A 92 392 113 HOH HOH . E 4 HOH A 93 393 134 HOH HOH . E 4 HOH A 94 394 124 HOH HOH . E 4 HOH A 95 395 43 HOH HOH . E 4 HOH A 96 396 121 HOH HOH . E 4 HOH A 97 397 111 HOH HOH . E 4 HOH A 98 398 57 HOH HOH . E 4 HOH A 99 399 62 HOH HOH . E 4 HOH A 100 400 132 HOH HOH . E 4 HOH A 101 401 77 HOH HOH . E 4 HOH A 102 402 78 HOH HOH . E 4 HOH A 103 403 118 HOH HOH . E 4 HOH A 104 404 123 HOH HOH . E 4 HOH A 105 405 70 HOH HOH . E 4 HOH A 106 406 92 HOH HOH . E 4 HOH A 107 407 120 HOH HOH . E 4 HOH A 108 408 130 HOH HOH . E 4 HOH A 109 409 115 HOH HOH . E 4 HOH A 110 410 82 HOH HOH . E 4 HOH A 111 411 112 HOH HOH . E 4 HOH A 112 412 102 HOH HOH . E 4 HOH A 113 413 110 HOH HOH . E 4 HOH A 114 414 83 HOH HOH . E 4 HOH A 115 415 109 HOH HOH . E 4 HOH A 116 416 61 HOH HOH . E 4 HOH A 117 417 127 HOH HOH . E 4 HOH A 118 418 80 HOH HOH . E 4 HOH A 119 419 101 HOH HOH . E 4 HOH A 120 420 114 HOH HOH . E 4 HOH A 121 421 65 HOH HOH . E 4 HOH A 122 422 35 HOH HOH . E 4 HOH A 123 423 126 HOH HOH . E 4 HOH A 124 424 42 HOH HOH . E 4 HOH A 125 425 50 HOH HOH . E 4 HOH A 126 426 105 HOH HOH . E 4 HOH A 127 427 55 HOH HOH . E 4 HOH A 128 428 1 HOH HOH . E 4 HOH A 129 429 74 HOH HOH . E 4 HOH A 130 430 84 HOH HOH . E 4 HOH A 131 431 96 HOH HOH . E 4 HOH A 132 432 108 HOH HOH . E 4 HOH A 133 433 97 HOH HOH . E 4 HOH A 134 434 104 HOH HOH . E 4 HOH A 135 435 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 -22.499 2.319 -7.172 1 55.13 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 3 -22.176 3.374 -8.087 1 53.82 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 3 -22.443 2.834 -5.735 1 47.98 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 3 -21.096 3.188 -5.401 1 41.35 ? O2 EDO 203 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #