data_7U6B # _model_server_result.job_id -VrRzOB9zfJFIWGEP8vBaA _model_server_result.datetime_utc '2024-11-27 20:57:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7u6b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 7U6B # _exptl.entry_id 7U6B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7U6B _cell.length_a 80.499 _cell.length_b 80.499 _cell.length_c 247.678 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7U6B _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 543 B CYS 543 1_555 A SG CYS 543 B CYS 543 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc1 A O ASP 172 B ASP 172 1_555 C K K . B K 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.828 ? metalc ? metalc2 A OD2 ASP 172 B ASP 172 1_555 C K K . B K 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc3 A O ASP 174 B ASP 174 1_555 C K K . B K 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc4 A OD2 ASP 174 B ASP 174 1_555 E ZN ZN . B ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.913 ? metalc ? metalc5 A O HIS 176 B HIS 176 1_555 C K K . B K 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc6 A ND1 HIS 176 B HIS 176 1_555 E ZN ZN . B ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc7 A O PHE 185 B PHE 185 1_555 D K K . B K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc8 A O ASP 188 B ASP 188 1_555 D K K . B K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.868 ? metalc ? metalc9 A O VAL 191 B VAL 191 1_555 D K K . B K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc10 A OG SER 195 B SER 195 1_555 C K K . B K 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.95 ? metalc ? metalc11 A O TRP 196 B TRP 196 1_555 C K K . B K 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc12 A O PHE 224 B PHE 224 1_555 D K K . B K 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.114 ? metalc ? metalc13 A OD2 ASP 267 B ASP 267 1_555 E ZN ZN . B ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc14 B O17 LTO . B LTO 701 1_555 E ZN ZN . B ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc15 B O19 LTO . B LTO 701 1_555 E ZN ZN . B ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc16 D K K . B K 703 1_555 I O HOH . B HOH 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc17 D K K . B K 703 1_555 I O HOH . B HOH 844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.335 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 308 n n P O2 PO4 sing 309 n n P O3 PO4 sing 310 n n P O4 PO4 sing 311 n n # _atom_sites.entry_id 7U6B _atom_sites.fract_transf_matrix[1][1] 0.012423 _atom_sites.fract_transf_matrix[1][2] 0.007172 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014344 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004038 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LTO B 1 701 701 LTO LIG . C 3 K B 1 702 1 K K . D 3 K B 1 703 2 K K . E 4 ZN B 1 704 1 ZN ZN . F 5 PO4 B 1 705 1 PO4 PO4 . G 5 PO4 B 1 706 2 PO4 PO4 . H 5 PO4 B 1 707 3 PO4 PO4 . I 6 HOH B 1 801 67 HOH HOH . I 6 HOH B 2 802 35 HOH HOH . I 6 HOH B 3 803 33 HOH HOH . I 6 HOH B 4 804 38 HOH HOH . I 6 HOH B 5 805 21 HOH HOH . I 6 HOH B 6 806 2 HOH HOH . I 6 HOH B 7 807 18 HOH HOH . I 6 HOH B 8 808 47 HOH HOH . I 6 HOH B 9 809 16 HOH HOH . I 6 HOH B 10 810 61 HOH HOH . I 6 HOH B 11 811 32 HOH HOH . I 6 HOH B 12 812 24 HOH HOH . I 6 HOH B 13 813 11 HOH HOH . I 6 HOH B 14 814 10 HOH HOH . I 6 HOH B 15 815 1 HOH HOH . I 6 HOH B 16 816 49 HOH HOH . I 6 HOH B 17 817 4 HOH HOH . I 6 HOH B 18 818 25 HOH HOH . I 6 HOH B 19 819 63 HOH HOH . I 6 HOH B 20 820 20 HOH HOH . I 6 HOH B 21 821 40 HOH HOH . I 6 HOH B 22 822 70 HOH HOH . I 6 HOH B 23 823 46 HOH HOH . I 6 HOH B 24 824 52 HOH HOH . I 6 HOH B 25 825 60 HOH HOH . I 6 HOH B 26 826 39 HOH HOH . I 6 HOH B 27 827 66 HOH HOH . I 6 HOH B 28 828 69 HOH HOH . I 6 HOH B 29 829 57 HOH HOH . I 6 HOH B 30 830 42 HOH HOH . I 6 HOH B 31 831 14 HOH HOH . I 6 HOH B 32 832 58 HOH HOH . I 6 HOH B 33 833 31 HOH HOH . I 6 HOH B 34 834 15 HOH HOH . I 6 HOH B 35 835 17 HOH HOH . I 6 HOH B 36 836 12 HOH HOH . I 6 HOH B 37 837 9 HOH HOH . I 6 HOH B 38 838 19 HOH HOH . I 6 HOH B 39 839 65 HOH HOH . I 6 HOH B 40 840 43 HOH HOH . I 6 HOH B 41 841 53 HOH HOH . I 6 HOH B 42 842 23 HOH HOH . I 6 HOH B 43 843 27 HOH HOH . I 6 HOH B 44 844 13 HOH HOH . I 6 HOH B 45 845 28 HOH HOH . I 6 HOH B 46 846 6 HOH HOH . I 6 HOH B 47 847 44 HOH HOH . I 6 HOH B 48 848 34 HOH HOH . I 6 HOH B 49 849 36 HOH HOH . I 6 HOH B 50 850 5 HOH HOH . I 6 HOH B 51 851 22 HOH HOH . I 6 HOH B 52 852 54 HOH HOH . I 6 HOH B 53 853 3 HOH HOH . I 6 HOH B 54 854 7 HOH HOH . I 6 HOH B 55 855 45 HOH HOH . I 6 HOH B 56 856 51 HOH HOH . I 6 HOH B 57 857 37 HOH HOH . I 6 HOH B 58 858 30 HOH HOH . I 6 HOH B 59 859 48 HOH HOH . I 6 HOH B 60 860 64 HOH HOH . I 6 HOH B 61 861 8 HOH HOH . I 6 HOH B 62 862 72 HOH HOH . I 6 HOH B 63 863 41 HOH HOH . I 6 HOH B 64 864 68 HOH HOH . I 6 HOH B 65 865 55 HOH HOH . I 6 HOH B 66 866 59 HOH HOH . I 6 HOH B 67 867 50 HOH HOH . I 6 HOH B 68 868 62 HOH HOH . I 6 HOH B 69 869 71 HOH HOH . I 6 HOH B 70 870 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 5 -25.082 -20.334 32.244 1 38.14 ? P PO4 705 B 1 HETATM 2 O O1 PO4 . . . F 5 -24.967 -19.35 31.085 1 39.3 ? O1 PO4 705 B 1 HETATM 3 O O2 PO4 . . . F 5 -26.388 -21.107 32.165 1 35.8 ? O2 PO4 705 B 1 HETATM 4 O O3 PO4 . . . F 5 -23.863 -21.219 32.157 1 41.4 ? O3 PO4 705 B 1 HETATM 5 O O4 PO4 . . . F 5 -25.037 -19.666 33.599 1 35.55 ? O4 PO4 705 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #